Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 64.38 | 81.69 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 55.94 | 80.85 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 47.69 | 46.42 |
| KRH36727 | Soybean | nucleus | 18.35 | 41.28 |
| PGSC0003DMT400054667 | Potato | cytosol | 26.69 | 37.26 |
| KRG89432 | Soybean | nucleus | 33.66 | 35.51 |
| CDY70429 | Canola | plastid | 29.83 | 34.27 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 31.6 | 33.97 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 32.38 | 33.71 |
| Solyc02g069270.2.1 | Tomato | cytosol | 32.09 | 33.47 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 32.38 | 33.2 |
| AT1G31280.1 | Thale cress | nucleus | 31.6 | 31.76 |
| KRH11732 | Soybean | nucleus | 32.29 | 31.73 |
| CDY02373 | Canola | nucleus | 31.8 | 31.67 |
| Solyc02g069260.2.1 | Tomato | nucleus | 32.29 | 31.57 |
| Bra023172.1-P | Field mustard | nucleus | 32.09 | 31.53 |
| PGSC0003DMT400054669 | Potato | cytosol | 32.48 | 31.49 |
| Bra040815.1-P | Field mustard | cytosol | 31.11 | 31.42 |
| CDY25885 | Canola | cytosol | 31.01 | 31.29 |
| Solyc02g069280.2.1 | Tomato | nucleus | 30.62 | 31.23 |
| CDY55876 | Canola | cytosol | 31.5 | 31.01 |
| PGSC0003DMT400054661 | Potato | nucleus | 28.26 | 29.39 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 23.55 | 28.47 |
| AT1G31290.1 | Thale cress | nucleus | 31.99 | 27.3 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 26.89 | 27.08 |
| HORVU6Hr1G036840.2 | Barley | plastid | 23.75 | 25.5 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 25.81 | 25.46 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 25.52 | 24.44 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 25.12 | 24.36 |
| HORVU0Hr1G012490.1 | Barley | nucleus | 21.1 | 24.35 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 21.49 | 23.75 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 25.91 | 21.69 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 3.43 | 17.16 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 9.62 | 16.39 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 2.36 | 9.6 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | UniProt:A0A287J444 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0031047 | EnsemblPlantsGene:HORVU2Hr1G098620 | EnsemblPlants:HORVU2Hr1G098620.2 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFscan:PS50821 | PFscan:PS50822 |
| PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 |
| SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI000B478838 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:684080121..684086180
Molecular Weight (calculated)
112973.0 Da
IEP (calculated)
9.460
GRAVY (calculated)
-0.554
Length
1019 amino acids
Sequence
(BLAST)
(BLAST)
0001: SNQRGGGYGG RGGGQVSLSR DGGGGGGGVA DADEDGFTPV RSQSRRRSSG GGGGDGASGG GVPLEPSGRG PRNVPRGPHS HGHDDHAQQQ QQHRGRGIAD
0101: RGGGGWNHGR ADSDSSYGRH QGHGGGGFQG QHRSSQEQQR RNCRPYDPPW WALKETPQAT SSPSSGPVGC AVPLEKIEVK LIVNHFRIMF GVSAIFCYDI
0201: KLSSGASGSL DLSMADQSFV MAKLLEILKR PPDSLAAVSD GKGRLFTSAE LPESVYQVEV RSRTYNASAE LKQKLLPREA LQPPVAKGIL PALDAIVREA
0301: SSSGKIIIGQ TFYSQQQRPK ISYHDGAFTI ETLKGTTQTL KATEQGLVLC VDCADMEFCK DGSRVLDLVK HLVKRLDTGI PFDMETTLDE KQRKYLERQL
0401: KGLCITVNYL KKSSKGKDNG TRIRKYRVQG LTAEPAQLIT FEDFDAGKPP HKLVEYYREQ YEVAIKYKML PCLDLSTKNG RPNYVPIELC SLHRRQKYPK
0501: DNMLKGSKHK PRDKPLKSEA RKKMILDMVE PPEGPCSSSR GQQFNITLNR GMTEVTGTIL APPTLTLGSS SGRRNYNISK KNCQWNLMND MMLIDGKVLK
0601: CWGILDFSAT SSDSFQEKLD VKKFIGNIVR KCVALGIHME KKDCTVVRSE MSVLSDPGKL REKLIQVKKD AEKHTQKKLQ LLFCPMSEQH HGYKILKMIC
0701: ETELGIQTQC LLSQVANKEG NSQDQYLSNL TLKINTKLGG SNMRLSDELP KVTGTSFMFI GADVNHPPPR DTESPSIAAV VASMDCPSAS QYVTRIRPQR
0801: NRQEKIDNLG TMCKELLEVY KKRNGGVKPA KIIYFRDGVS DELFDMVLDK ELVSMKEGIC EGGYSPTITV IVAKKRHHTR LFPNDRKELR TDNGNVLPGT
0901: VVDTVVVDGS HDDFFLCSHD GLHGTSRPTH YYMLKNAHGF ERVDLQKLVY RMCFVFARCT KPVSLTAPIK YADIAAYRGR DYYDSRMASL QYHQVPAGPP
1001: LFRDMPEVHE ALKDSMFFI
0101: RGGGGWNHGR ADSDSSYGRH QGHGGGGFQG QHRSSQEQQR RNCRPYDPPW WALKETPQAT SSPSSGPVGC AVPLEKIEVK LIVNHFRIMF GVSAIFCYDI
0201: KLSSGASGSL DLSMADQSFV MAKLLEILKR PPDSLAAVSD GKGRLFTSAE LPESVYQVEV RSRTYNASAE LKQKLLPREA LQPPVAKGIL PALDAIVREA
0301: SSSGKIIIGQ TFYSQQQRPK ISYHDGAFTI ETLKGTTQTL KATEQGLVLC VDCADMEFCK DGSRVLDLVK HLVKRLDTGI PFDMETTLDE KQRKYLERQL
0401: KGLCITVNYL KKSSKGKDNG TRIRKYRVQG LTAEPAQLIT FEDFDAGKPP HKLVEYYREQ YEVAIKYKML PCLDLSTKNG RPNYVPIELC SLHRRQKYPK
0501: DNMLKGSKHK PRDKPLKSEA RKKMILDMVE PPEGPCSSSR GQQFNITLNR GMTEVTGTIL APPTLTLGSS SGRRNYNISK KNCQWNLMND MMLIDGKVLK
0601: CWGILDFSAT SSDSFQEKLD VKKFIGNIVR KCVALGIHME KKDCTVVRSE MSVLSDPGKL REKLIQVKKD AEKHTQKKLQ LLFCPMSEQH HGYKILKMIC
0701: ETELGIQTQC LLSQVANKEG NSQDQYLSNL TLKINTKLGG SNMRLSDELP KVTGTSFMFI GADVNHPPPR DTESPSIAAV VASMDCPSAS QYVTRIRPQR
0801: NRQEKIDNLG TMCKELLEVY KKRNGGVKPA KIIYFRDGVS DELFDMVLDK ELVSMKEGIC EGGYSPTITV IVAKKRHHTR LFPNDRKELR TDNGNVLPGT
0901: VVDTVVVDGS HDDFFLCSHD GLHGTSRPTH YYMLKNAHGF ERVDLQKLVY RMCFVFARCT KPVSLTAPIK YADIAAYRGR DYYDSRMASL QYHQVPAGPP
1001: LFRDMPEVHE ALKDSMFFI
0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
Arabidopsis Description
AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.