Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G195200.2 | Wheat | nucleus | 88.85 | 74.31 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 90.75 | 73.77 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 90.27 | 73.38 |
| Zm00001d015926_P001 | Maize | nucleus | 19.34 | 72.44 |
| OQU88608 | Sorghum | plastid | 70.82 | 67.76 |
| Zm00001d018436_P001 | Maize | cytosol | 9.49 | 65.57 |
| Zm00001d005045_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 16.84 | 61.47 |
| Zm00001d007786_P001 | Maize | nucleus | 66.79 | 54.55 |
| Os07t0188000-01 | Rice | nucleus | 67.85 | 54.37 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 51.48 | 51.0 |
| CDX71410 | Canola | nucleus | 57.53 | 50.95 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 61.92 | 50.58 |
| CDY04517 | Canola | plastid | 57.41 | 50.57 |
| Bra011993.1-P | Field mustard | plastid | 57.53 | 50.21 |
| KRH25139 | Soybean | plastid | 56.82 | 49.84 |
| KRH30536 | Soybean | plastid | 52.08 | 49.33 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 57.65 | 48.75 |
| Zm00001d025691_P001 | Maize | mitochondrion | 11.27 | 48.72 |
| HORVU6Hr1G036840.2 | Barley | plastid | 53.86 | 47.84 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 58.36 | 47.63 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 11.39 | 47.06 |
| Solyc06g074730.2.1 | Tomato | nucleus | 54.69 | 45.6 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 55.16 | 45.37 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 55.99 | 44.36 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 55.52 | 38.46 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 47.09 | 37.77 |
| HORVU0Hr1G012490.1 | Barley | nucleus | 34.64 | 33.07 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 36.89 | 30.73 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 33.57 | 30.69 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 7.95 | 26.8 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 32.74 | 26.36 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 16.73 | 23.58 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 28.47 | 23.55 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | UniProt:A0A287HKI5 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:HORVU2Hr1G031130 |
| EnsemblPlants:HORVU2Hr1G031130.2 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF24 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| UniParc:UPI000B480AAB | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:116787397..116793928
Molecular Weight (calculated)
94176.4 Da
IEP (calculated)
9.277
GRAVY (calculated)
-0.284
Length
843 amino acids
Sequence
(BLAST)
(BLAST)
001: TVGRKMMVRA NHFLASFADK DICHYDVTIT PEPKTRRINR VLMTELTSKH RASSLGGLLV AYDGSKSLYT AAELPFQVMD FSIKLGKAAR ETEYKVTIRF
101: AARANLYHLQ QFLSGRQRDS PQDTIQALDV VLRESPSLNY VTASRSFYSK LFGQRDIGDG LECWRGYYQS LRPTQIGLSL NIDISSTSFY KPISVVQFVQ
201: ECLNLRIVDP NQPLSDRDRL KVKKALRGVR VETTHQEGKR SAYKITGITS VPLIQLNFPL DDGNQMTVVQ YFRDRYKYGL RFISWPCLQS GNDSRPIYLP
301: MEVCTIIEGQ RFARKLNEKQ VTGILRATCE RPMDREKSIL KMVKQNNYSA DKLAQEFGVE VMDKMVNVQA RVLPPPMLKY HDSGKDKACA PSVGQWNMIG
401: KKMINGGNVQ SWTCLNFSRL PIDGVRRFCG DLVKVCNAIG MVFNPRPVAE IFSASANNID GALKDVHQRT PNLQLLIVIL PDVTGHYGKV KKVCETDLGI
501: VSQCLKPDKV DRANKQYFEN VALKVNVKVG GRNTALQQAL ACRIPLVSEK PTIFFGADVT HPAAGDVTSP SIAAVVASMD LPEITNYKAV VSAQPPRQEI
601: IQDLYCQGTD PEKGTPVHGG MMRELLVSFY KKTGYKPSRI IFYRDGVSEG QFAQVLMYEM DAIRKACASL QADYQPKVTF VVVQKRHHTR LFPEVHGKET
701: DKSGNILPGT VVDTNICHPT EFDFYLCSHA GIQGTSRPTH YHVLFDENGF TADGLQQLTN NLCYTYARCT RSVSVVPPAY YAHLAAFRAR YYDEPSEGSD
801: SASIVSGGTR ESAATGAGAA GPPAAFRPLP RIRDNVKEVM FYC
101: AARANLYHLQ QFLSGRQRDS PQDTIQALDV VLRESPSLNY VTASRSFYSK LFGQRDIGDG LECWRGYYQS LRPTQIGLSL NIDISSTSFY KPISVVQFVQ
201: ECLNLRIVDP NQPLSDRDRL KVKKALRGVR VETTHQEGKR SAYKITGITS VPLIQLNFPL DDGNQMTVVQ YFRDRYKYGL RFISWPCLQS GNDSRPIYLP
301: MEVCTIIEGQ RFARKLNEKQ VTGILRATCE RPMDREKSIL KMVKQNNYSA DKLAQEFGVE VMDKMVNVQA RVLPPPMLKY HDSGKDKACA PSVGQWNMIG
401: KKMINGGNVQ SWTCLNFSRL PIDGVRRFCG DLVKVCNAIG MVFNPRPVAE IFSASANNID GALKDVHQRT PNLQLLIVIL PDVTGHYGKV KKVCETDLGI
501: VSQCLKPDKV DRANKQYFEN VALKVNVKVG GRNTALQQAL ACRIPLVSEK PTIFFGADVT HPAAGDVTSP SIAAVVASMD LPEITNYKAV VSAQPPRQEI
601: IQDLYCQGTD PEKGTPVHGG MMRELLVSFY KKTGYKPSRI IFYRDGVSEG QFAQVLMYEM DAIRKACASL QADYQPKVTF VVVQKRHHTR LFPEVHGKET
701: DKSGNILPGT VVDTNICHPT EFDFYLCSHA GIQGTSRPTH YHVLFDENGF TADGLQQLTN NLCYTYARCT RSVSVVPPAY YAHLAAFRAR YYDEPSEGSD
801: SASIVSGGTR ESAATGAGAA GPPAAFRPLP RIRDNVKEVM FYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.