Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71410 | Canola | nucleus | 75.53 | 79.1 |
| CDY04517 | Canola | plastid | 74.92 | 78.06 |
| Bra011993.1-P | Field mustard | plastid | 75.03 | 77.43 |
| Zm00001d015926_P001 | Maize | nucleus | 15.25 | 67.56 |
| TraesCS4B01G026600.1 | Wheat | cytosol | 31.09 | 63.92 |
| Zm00001d018436_P001 | Maize | cytosol | 7.72 | 63.11 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 52.56 | 61.72 |
| EER90726 | Sorghum | cytosol | 52.26 | 61.37 |
| Zm00001d005045_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 13.94 | 60.17 |
| TraesCS4A01G288300.1 | Wheat | plastid | 51.15 | 59.51 |
| TraesCS4D01G024100.1 | Wheat | plastid | 51.15 | 59.51 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 61.58 | 59.5 |
| TraesCS5B01G468000.1 | Wheat | plastid | 51.35 | 58.65 |
| KRH25139 | Soybean | plastid | 56.17 | 58.27 |
| OQU88608 | Sorghum | plastid | 51.35 | 58.12 |
| KRH30536 | Soybean | plastid | 51.76 | 57.98 |
| OQU91198 | Sorghum | nucleus | 43.03 | 57.74 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 48.75 | 57.65 |
| TraesCS4D01G024300.1 | Wheat | cytosol | 31.39 | 56.91 |
| TraesCS3B01G287600.1 | Wheat | nucleus | 51.66 | 56.84 |
| Zm00001d032611_P002 | Maize | vacuole | 21.06 | 56.45 |
| TraesCS5D01G454600.1 | Wheat | cytosol | 41.73 | 56.14 |
| Os03t0789466-00 | Rice | cytosol, mitochondrion, nucleus | 25.48 | 55.58 |
| TraesCS5B01G454200.1 | Wheat | cytosol | 37.11 | 54.81 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 39.42 | 54.81 |
| OQU91197 | Sorghum | plastid | 48.55 | 54.75 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 10.93 | 53.43 |
| Os03t0800200-01 | Rice | plasma membrane | 56.57 | 53.31 |
| TraesCS5B01G452500.1 | Wheat | nucleus | 48.65 | 53.18 |
| TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 55.97 | 52.99 |
| TraesCS5B01G451400.2 | Wheat | plastid | 56.17 | 52.83 |
| Zm00001d036886_P001 | Maize | plastid | 11.84 | 52.21 |
| Os03t0682600-00 | Rice | nucleus | 39.12 | 52.21 |
| TraesCS5B01G455700.1 | Wheat | cytosol, mitochondrion, plastid | 51.55 | 52.18 |
| Solyc06g074730.2.1 | Tomato | nucleus | 52.46 | 51.73 |
| AT1G48410.2 | Thale cress | nucleus | 54.06 | 51.33 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 51.66 | 51.09 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 52.26 | 50.83 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 52.86 | 50.82 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 52.86 | 50.82 |
| Zm00001d009158_P003 | Maize | golgi | 22.27 | 50.8 |
| AT5G43810.3 | Thale cress | nucleus | 49.75 | 50.2 |
| Zm00001d013063_P001 | Maize | nucleus | 50.45 | 49.8 |
| Zm00001d025691_P001 | Maize | mitochondrion | 9.63 | 49.23 |
| Zm00001d007786_P001 | Maize | nucleus | 50.45 | 48.74 |
| Zm00001d013542_P003 | Maize | nucleus | 51.35 | 48.53 |
| Os07t0188000-01 | Rice | nucleus | 50.65 | 48.0 |
| TraesCS4B01G024000.1 | Wheat | nucleus | 49.25 | 47.95 |
| GSMUA_Achr4P17670_001 | Banana | extracellular, plasma membrane | 17.25 | 47.91 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 48.65 | 46.95 |
| GSMUA_Achr6P04510_001 | Banana | nucleus | 52.76 | 42.52 |
| TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 22.47 | 42.5 |
| Zm00001d033518_P001 | Maize | nucleus | 49.55 | 41.62 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 35.61 | 41.57 |
| TraesCS5B01G458100.1 | Wheat | cytosol | 38.31 | 40.21 |
| Zm00001d039440_P001 | Maize | cytosol | 8.93 | 36.48 |
| Os02t0616300-00 | Rice | vacuole | 11.74 | 35.35 |
| AT2G32940.1 | Thale cress | nucleus | 30.99 | 35.19 |
| AT5G21150.1 | Thale cress | nucleus | 31.29 | 34.82 |
| AT5G21030.2 | Thale cress | cytosol | 29.79 | 34.78 |
| TraesCS5D01G192700.2 | Wheat | nucleus | 32.8 | 34.68 |
| AT2G27040.1 | Thale cress | nucleus | 31.49 | 33.98 |
| AT1G69440.1 | Thale cress | cytosol | 32.3 | 32.53 |
| EER93271 | Sorghum | cytosol | 29.49 | 29.05 |
| AT1G31280.1 | Thale cress | nucleus | 28.79 | 28.3 |
| Zm00001d035554_P001 | Maize | plastid | 14.14 | 28.03 |
| AT1G31290.1 | Thale cress | nucleus | 29.29 | 24.46 |
| Os03t0789500-01 | Rice | cytosol | 0.5 | 2.2 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | PDB:4G0O | EntrezGene:817334 |
| ProteinID:AAD21514.1 | ProteinID:AEC08055.1 | Symbol:AGO5 | ArrayExpress:AT2G27880 | EnsemblPlantsGene:AT2G27880 | RefSeq:AT2G27880 |
| TAIR:AT2G27880 | RefSeq:AT2G27880-TAIR-G | EnsemblPlants:AT2G27880.1 | TAIR:AT2G27880.1 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | Unigene:At.50103 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006412 | GO:GO:0006417 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009814 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 |
| GO:GO:0031047 | GO:GO:0040029 | GO:GO:0046872 | GO:GO:0060145 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | RefSeq:NP_850110.1 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PO:PO:0000005 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0025022 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF105 |
| InterPro:Piwi | UniProt:Q9SJK3 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 |
| SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI000016238E | SEG:seg | : |
Description
AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
Coordinates
chr2:+:11871378..11876989
Molecular Weight (calculated)
111095.0 Da
IEP (calculated)
9.920
GRAVY (calculated)
-0.486
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.