Factsheet for Zm00001d036886_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018436_P001	Maize	cytosol	27.43	50.82
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	38.05	37.23
Zm00001d039440_P001	Maize	cytosol	36.73	34.02
Zm00001d015926_P001	Maize	nucleus	30.53	30.67
Zm00001d026146_P001	Maize	nucleus	18.58	28.77
Zm00001d032611_P002	Maize	vacuole	46.02	27.96
Zm00001d009158_P003	Maize	golgi	38.5	19.91
Zm00001d025331_P002	Maize	cytosol	43.81	17.93
Zm00001d025073_P001	Maize	cytosol	30.09	17.53
Zm00001d035554_P001	Maize	plastid	37.61	16.9
Zm00001d025691_P001	Maize	mitochondrion	14.16	16.41
TraesCS5A01G446000.1	Wheat	cytosol	54.42	14.49
TraesCS5D01G454600.1	Wheat	cytosol	44.69	13.63
TraesCS3B01G287600.1	Wheat	nucleus	52.65	13.13
Zm00001d013063_P001	Maize	nucleus	57.52	12.87
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	55.31	12.69
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	47.35	12.57
Zm00001d036917_P009	Maize	nucleus	53.54	12.53
CDX71410	Canola	nucleus	52.21	12.39
CDY04517	Canola	plastid	52.21	12.33
KRH25139	Soybean	plastid	52.21	12.28
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	57.08	12.25
KRH30536	Soybean	plastid	48.23	12.25
Bra011993.1-P	Field mustard	plastid	52.21	12.22
Os03t0800200-01	Rice	plasma membrane	57.08	12.19
TraesCS5B01G451400.2	Wheat	plastid	57.08	12.17
Zm00001d046438_P003	Maize	cytosol	53.1	11.94
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	54.42	11.92
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	52.21	11.84
TraesCS5B01G452500.1	Wheat	nucleus	46.9	11.62
Solyc06g074730.2.1	Tomato	nucleus	51.33	11.47
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	51.77	11.41
Zm00001d013542_P003	Maize	nucleus	52.65	11.28
Zm00001d007786_P001	Maize	nucleus	51.33	11.24
Zm00001d014875_P001	Maize	nucleus	52.65	11.03
Zm00001d002650_P003	Maize	nucleus	54.42	10.92
Zm00001d011096_P059	Maize	nucleus	53.54	10.92
Zm00001d026111_P014	Maize	nucleus	52.65	10.87
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	53.1	10.44
Zm00001d021345_P001	Maize	nucleus	42.92	10.44
TraesCS5B01G458100.1	Wheat	cytosol	42.48	10.11
Zm00001d033518_P001	Maize	nucleus	52.21	9.94
Zm00001d002316_P003	Maize	plastid	36.73	9.7
Zm00001d006351_P001	Maize	nucleus	44.25	9.5
Zm00001d026300_P001	Maize	nucleus	36.28	9.31
Zm00001d029573_P001	Maize	cytosol	40.27	8.82
Zm00001d033206_P001	Maize	cytosol	37.17	8.7
Zm00001d019905_P003	Maize	nucleus	30.97	7.6
Zm00001d008249_P012	Maize	nucleus	30.09	7.56
Zm00001d040429_P012	Maize	nucleus	30.09	7.55
Zm00001d039214_P025	Maize	nucleus	30.53	7.47
TraesCS5D01G192700.2	Wheat	nucleus	25.22	6.04
TraesCS5B01G454200.1	Wheat	cytosol	17.7	5.93
Zm00001d037833_P001	Maize	mitochondrion	6.19	5.65
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	10.62	5.25
Zm00001d044183_P001	Maize	cytosol	3.54	4.42
Os03t0789500-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.420.10	Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1D6LS95	ProteinID:AQK82322.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR003165	InterPro:IPR036397	InterPro:NAD(P)-bd_dom_sf	InterPro:NmrA-like
PFAM:PF02171	PFAM:PF05368	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SUPFAM:SSF51735	SUPFAM:SSF53098	UniParc:UPI000843466C
EnsemblPlantsGene:Zm00001d036886	EnsemblPlants:Zm00001d036886_P001	EnsemblPlants:Zm00001d036886_T001	:	:	:

Description

No Description!

Coordinates

chr6:+:105639934..105641083

Molecular Weight (calculated)

25386.4 Da

IEP (calculated)

8.003

GRAVY (calculated)

-0.285

Length

226 amino acids

Sequence
(BLAST)

001: MTRSHSLPPI NRPNPSIVLS RAKAMEKSRV LVVGSTGYIG RRLVRASLAQ GHPTLVLLRP EIGLDIDKLQ MLPSLEAQGA RLVEASLEDH KWGTTYDFQH
101: QNLSAKYGLH CHAHVNGFVP FHFKACASLE EGYIPPLTFV VVQKRHHTRL FPEVHGRHDM TDKSGNILPG TVVDQKICHP TEFDFYLCSH VGIQGTSRLT
201: HYHVLYDENE FTADALQSPT NNLCYT

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.