Factsheet for Zm00001d037833_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044183_P001	Maize	cytosol	67.34	92.27
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	80.65	25.74
OQU82149	Sorghum	nucleus	93.95	21.63
Zm00001d026111_P014	Maize	nucleus	94.76	21.46
Zm00001d002650_P003	Maize	nucleus	94.76	20.87
Solyc03g098280.2.1	Tomato	nucleus	82.26	20.82
Os04t0566500-04	Rice	nucleus	92.34	20.8
TraesCS2D01G400200.1	Wheat	nucleus	91.53	20.66
TraesCS2B01G421000.2	Wheat	nucleus	91.53	20.6
TraesCS2A01G403100.4	Wheat	nucleus	91.13	20.18
CDY04311	Canola	cytosol, nucleus, plastid	79.44	20.1
Solyc06g072300.2.1	Tomato	nucleus	85.08	20.02
PGSC0003DMT400069313	Potato	cytosol	85.08	20.02
Zm00001d011096_P059	Maize	nucleus	86.29	19.31
VIT_17s0053g00680.t01	Wine grape	nucleus	84.27	19.26
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	88.71	19.15
CDY41831	Canola	nucleus	79.84	18.97
CDY68174	Canola	nucleus	79.84	18.82
TraesCSU01G065300.1	Wheat	nucleus	89.92	18.71
AT1G48410.2	Thale cress	nucleus	78.63	18.57
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	89.92	18.43
TraesCS7D01G036100.3	Wheat	endoplasmic reticulum, golgi	89.92	18.43
Bra014136.1-P	Field mustard	nucleus	79.84	18.35
HORVU7Hr1G007000.14	Barley	nucleus	89.92	18.32
Zm00001d036917_P009	Maize	nucleus	71.37	18.32
PGSC0003DMT400079716	Potato	nucleus	82.66	18.19
CDY23683	Canola	cytosol, nucleus, plastid	79.44	18.14
Bra032254.1-P	Field mustard	nucleus	79.44	17.73
Zm00001d046438_P003	Maize	cytosol	71.37	17.61
Zm00001d014875_P001	Maize	nucleus	75.81	17.42
Zm00001d021345_P001	Maize	nucleus	47.98	12.81
Zm00001d013063_P001	Maize	nucleus	52.02	12.77
Zm00001d006351_P001	Maize	nucleus	50.0	11.78
Zm00001d013542_P003	Maize	nucleus	46.37	10.9
Zm00001d007786_P001	Maize	nucleus	42.34	10.17
Zm00001d033518_P001	Maize	nucleus	44.76	9.35
Zm00001d019905_P003	Maize	nucleus	33.87	9.12
Zm00001d033206_P001	Maize	cytosol	35.48	9.11
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	8.47	9.09
Zm00001d040429_P012	Maize	nucleus	32.66	8.99
Zm00001d008249_P012	Maize	nucleus	31.05	8.56
Zm00001d039214_P025	Maize	nucleus	31.45	8.44
Zm00001d029573_P001	Maize	cytosol	33.87	8.14
Zm00001d002316_P003	Maize	plastid	27.82	8.06
Zm00001d026300_P001	Maize	nucleus	27.82	7.83
Zm00001d036886_P001	Maize	plastid	5.65	6.19
Zm00001d025331_P002	Maize	cytosol	10.08	4.53
GSMUA_Achr7P04100_001	Banana	extracellular	4.03	4.03
Zm00001d035554_P001	Maize	plastid	6.05	2.98
Zm00001d015926_P001	Maize	nucleus	2.42	2.67
Zm00001d025691_P001	Maize	mitochondrion	2.02	2.56
Zm00001d039440_P001	Maize	cytosol	2.42	2.46
Zm00001d032611_P002	Maize	vacuole	3.63	2.42
Zm00001d009158_P003	Maize	golgi	3.63	2.06
Zm00001d025073_P001	Maize	cytosol	2.82	1.8
Zm00001d026146_P001	Maize	nucleus	0.81	1.37
KRG99173	Soybean	cytosol	0.4	0.64
Zm00001d018436_P001	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.170.260.10	MapMan:35.1	UniProt:A0A1D6M0W6	ProteinID:AQK84922.1	InterPro:Argonaute_N	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047
InterPro:IPR003100	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF16486	PFscan:PS50821
PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	SMART:SM00949	SUPFAM:SSF101690	UniParc:UPI0008441D33	EnsemblPlantsGene:Zm00001d037833
EnsemblPlants:Zm00001d037833_P001	EnsemblPlants:Zm00001d037833_T001	:	:	:	:

Description

Protein argonaute 1

Coordinates

chr6:-:139171673..139177865

Molecular Weight (calculated)

28725.3 Da

IEP (calculated)

10.415

GRAVY (calculated)

-0.267

Length

248 amino acids

Sequence
(BLAST)

001: MARRERVFKV VIKFAARADL HHLAMFLAGR QADAPQEALQ VLDIVLRELP TARYSPVGRS FYSPNLGRRQ KLDMSSTAFI EPLPMIDFVA QLLNRDILVR
101: PLSDSDRVKI KKTLRGVKVE VTHRGNMRRK YRISGLTSQA TRELSFPVDD RGTVKTVVQY FMETYGFSIQ HTTLPCLQVG NQQRPNYLPM EVCKIVEGQR
201: YSKRLNEKQI TSLLKVTCQR PQERELDILQ VVVYHMFYQC LHLMISNV

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.