Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G065300.1 | Wheat | nucleus | 92.11 | 94.04 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 91.04 | 91.57 |
| Zm00001d044183_P001 | Maize | cytosol | 13.56 | 91.16 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 90.63 | 91.16 |
| Zm00001d037833_P001 | Maize | mitochondrion | 18.32 | 89.92 |
| KRG99173 | Soybean | cytosol | 11.34 | 88.46 |
| OQU82149 | Sorghum | nucleus | 76.5 | 86.44 |
| Os04t0566500-04 | Rice | nucleus | 77.9 | 86.1 |
| Zm00001d026111_P014 | Maize | nucleus | 73.95 | 82.19 |
| Zm00001d002650_P003 | Maize | nucleus | 75.84 | 81.97 |
| EES18841 | Sorghum | nucleus | 74.53 | 81.79 |
| Zm00001d011096_P059 | Maize | nucleus | 73.13 | 80.32 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 49.96 | 78.25 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 73.71 | 78.07 |
| Solyc06g072300.2.1 | Tomato | nucleus | 65.57 | 75.71 |
| PGSC0003DMT400069313 | Potato | cytosol | 65.49 | 75.62 |
| Solyc03g098280.2.1 | Tomato | nucleus | 60.15 | 74.69 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 59.65 | 74.08 |
| CDY41831 | Canola | nucleus | 63.19 | 73.66 |
| CDY68174 | Canola | nucleus | 63.6 | 73.57 |
| AT1G48410.2 | Thale cress | nucleus | 63.43 | 73.52 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 65.0 | 72.9 |
| Bra014136.1-P | Field mustard | nucleus | 63.85 | 72.01 |
| Zm00001d025073_P001 | Maize | cytosol | 22.68 | 71.13 |
| Bra032254.1-P | Field mustard | nucleus | 64.58 | 70.75 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 63.02 | 70.63 |
| PGSC0003DMT400079716 | Potato | nucleus | 64.42 | 69.57 |
| Zm00001d025331_P002 | Maize | cytosol | 30.32 | 66.85 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 56.29 | 64.38 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 12.65 | 62.1 |
| HORVU6Hr1G036840.2 | Barley | plastid | 48.4 | 62.07 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 38.46 | 55.52 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 10.76 | 52.4 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 8.38 | 50.0 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 41.17 | 48.5 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 39.36 | 45.58 |
| HORVU0Hr1G012490.1 | Barley | nucleus | 25.14 | 34.65 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 25.23 | 33.3 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 26.05 | 31.32 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 26.21 | 30.47 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 13.39 | 27.26 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 21.69 | 25.91 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A287VFT0 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 |
| EnsemblPlantsGene:HORVU7Hr1G007000 | EnsemblPlants:HORVU7Hr1G007000.14 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom |
| InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 |
| PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 |
| InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 |
| SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI000B470763 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:-:9459266..9467181
Molecular Weight (calculated)
133694.0 Da
IEP (calculated)
9.861
GRAVY (calculated)
-0.671
Length
1217 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKKRTGTG ESSGEASGAP GQGSSQPAER APPQQHGGGG GRGWVPQQGG RGGGQHLGRG GGQYQGRGGP PEYQQRDYQG RGQAGGGLPE YQQRDYQGRG
0101: QTGGGPPEYQ QRGPQGRGNS GGGPPEYQPR GPQGRGNPGG GPPEYQPRGP QGRGHQGGGP PEYQPHDPQG RGHPGGGPPE YQPRGPQGRG HPSGGPPEYQ
0201: PRGPQGRGHP GGGPSEYQPR DPQGRGGPPE YQQHDYQGRG GPRPRGGGMP QPSYGGHRGG RGGHNVPPGQ SRTVPELHQA PDVQYQAPVV SPSASGAGSS
0301: SQPVAEVSSG QVEQQFQKLD ISDQSSTSQA IQPAPASSKS VRFPLRPGMG KCGDRCVVKA NHFFAELPDK DLHQYDVTIT PEVTSRGVNR AVIAELVKLY
0401: RQSHMNGRLP AYDGRKSLYT AGPLPFTTRT FEIALQDEDE GLVGGQATPR RERQFRVVIK YAARADLHHL AMFLAGRQPD APQEALQVLD IVLRELPTAR
0501: YSPVSRSFYS PNLGRRQRLG DGLESWRGFY QSIRPTQMGL SLNIDMSSTA FIEPLPVIEF VAQLLCRDIS VRPLTDSDRV KIKKALRGVK VEVTHRGNMR
0601: RKYRISGLTS QATRELSFPV DDRGTVKTVV QYFLETYGFN IQHTTLPCLQ VGNQQRPNYL PMEVCKIVEG QRYSKRLNEK QITALLKVTC QRPQEREKDI
0701: LQTVHHNAYY EDPYAQEFGI KIDEQLASVE ARVLPPPRLK YHDSGREKDV LPRVGQWNMM NKKMVNGGRV SHWACINFSR NVQDNAAKVF CHELAIMCQI
0801: SGMNFAPEPV LPVLSARPEH VERALKARYH DAMNASNPPG KELDLLIVIL PDNNGSLYGD LKRICETELG LVSQCCLTKH VFKMSKQYLA NVALKINVKV
0901: GGRNTVLVDA LARRIRLVTD RPTIIFGADV THPHPGEDSS PSIAAVVASQ DWPEITKYAG LVSAQAHRQE LIQDLFKVWQ DPQRGTVTGG MIKELLISFK
1001: RATGQKPQRI IFYRDGVSEG QFYQVLLFEL DAIRKACASL EPNYQPPVTF VVVQKRHHTR LFANNHNDQR TVDRSGNILP GTVVDSKICH PTEFDFYLCS
1101: HAGIQREQAG LPTIMFSGTR TNLLLMSCKL SQTTCATRML DAPALYRLVP PAYYAHLAAF RARFYMEPDT SDSGSVASGA RGGPPQGGPR SSTRFGNVAV
1201: RPLPALKENV KRVMFYC
0101: QTGGGPPEYQ QRGPQGRGNS GGGPPEYQPR GPQGRGNPGG GPPEYQPRGP QGRGHQGGGP PEYQPHDPQG RGHPGGGPPE YQPRGPQGRG HPSGGPPEYQ
0201: PRGPQGRGHP GGGPSEYQPR DPQGRGGPPE YQQHDYQGRG GPRPRGGGMP QPSYGGHRGG RGGHNVPPGQ SRTVPELHQA PDVQYQAPVV SPSASGAGSS
0301: SQPVAEVSSG QVEQQFQKLD ISDQSSTSQA IQPAPASSKS VRFPLRPGMG KCGDRCVVKA NHFFAELPDK DLHQYDVTIT PEVTSRGVNR AVIAELVKLY
0401: RQSHMNGRLP AYDGRKSLYT AGPLPFTTRT FEIALQDEDE GLVGGQATPR RERQFRVVIK YAARADLHHL AMFLAGRQPD APQEALQVLD IVLRELPTAR
0501: YSPVSRSFYS PNLGRRQRLG DGLESWRGFY QSIRPTQMGL SLNIDMSSTA FIEPLPVIEF VAQLLCRDIS VRPLTDSDRV KIKKALRGVK VEVTHRGNMR
0601: RKYRISGLTS QATRELSFPV DDRGTVKTVV QYFLETYGFN IQHTTLPCLQ VGNQQRPNYL PMEVCKIVEG QRYSKRLNEK QITALLKVTC QRPQEREKDI
0701: LQTVHHNAYY EDPYAQEFGI KIDEQLASVE ARVLPPPRLK YHDSGREKDV LPRVGQWNMM NKKMVNGGRV SHWACINFSR NVQDNAAKVF CHELAIMCQI
0801: SGMNFAPEPV LPVLSARPEH VERALKARYH DAMNASNPPG KELDLLIVIL PDNNGSLYGD LKRICETELG LVSQCCLTKH VFKMSKQYLA NVALKINVKV
0901: GGRNTVLVDA LARRIRLVTD RPTIIFGADV THPHPGEDSS PSIAAVVASQ DWPEITKYAG LVSAQAHRQE LIQDLFKVWQ DPQRGTVTGG MIKELLISFK
1001: RATGQKPQRI IFYRDGVSEG QFYQVLLFEL DAIRKACASL EPNYQPPVTF VVVQKRHHTR LFANNHNDQR TVDRSGNILP GTVVDSKICH PTEFDFYLCS
1101: HAGIQREQAG LPTIMFSGTR TNLLLMSCKL SQTTCATRML DAPALYRLVP PAYYAHLAAF RARFYMEPDT SDSGSVASGA RGGPPQGGPR SSTRFGNVAV
1201: RPLPALKENV KRVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.