Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G024300.1 | Wheat | cytosol | 49.95 | 93.82 |
| TraesCS4B01G024000.1 | Wheat | nucleus | 92.55 | 93.36 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 64.57 | 93.03 |
| OQU91198 | Sorghum | nucleus | 57.12 | 79.41 |
| Zm00001d013542_P003 | Maize | nucleus | 71.93 | 70.43 |
| Os03t0682600-00 | Rice | nucleus | 50.73 | 70.15 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 13.36 | 67.65 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 47.63 | 58.36 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 52.66 | 52.71 |
| KRH25139 | Soybean | plastid | 47.82 | 51.4 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 42.3 | 51.35 |
| CDX71410 | Canola | nucleus | 47.14 | 51.16 |
| CDY04517 | Canola | plastid | 46.95 | 50.68 |
| KRH30536 | Soybean | plastid | 43.66 | 50.67 |
| Bra011993.1-P | Field mustard | plastid | 47.05 | 50.31 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 46.95 | 48.65 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 48.02 | 48.39 |
| HORVU6Hr1G036840.2 | Barley | plastid | 44.24 | 48.16 |
| Solyc06g074730.2.1 | Tomato | nucleus | 46.76 | 47.77 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 48.31 | 46.9 |
| GSMUA_Achr6P04510_001 | Banana | nucleus | 54.79 | 45.76 |
| GSMUA_Achr4P17670_001 | Banana | extracellular, plasma membrane | 15.88 | 45.68 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 48.5 | 41.17 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 41.24 | 40.53 |
| HORVU0Hr1G012490.1 | Barley | nucleus | 30.59 | 35.79 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 29.43 | 32.97 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 31.95 | 32.61 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 7.55 | 31.2 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 30.3 | 29.89 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 25.46 | 25.81 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 14.23 | 24.58 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | UniProt:A0A287MZA3 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:HORVU4Hr1G004030 |
| EnsemblPlants:HORVU4Hr1G004030.1 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF49 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| UniParc:UPI000B478E63 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:8972435..8981437
Molecular Weight (calculated)
114325.0 Da
IEP (calculated)
9.719
GRAVY (calculated)
-0.439
Length
1033 amino acids
Sequence
(BLAST)
(BLAST)
0001: RRFRFRAATS PVAVPTMSTG ARGGGGRRGG RGGDQQGAGG RGRGRGRGGE QHDAHRGRGG GRGQGGGAEV QRGGHRDAGR GHLGAHRGGL GRGGMDVEAV
0101: ERPGGAGRGR PPATAHVEAL SGEMERRLAV SQAVQGSSSS APAPAATGAQ ESSQVAVAVP PRNLPPASSK STEFPARPGY GTVGKRCRVR ANHLLVQVAD
0201: KLEMYHYDVS ISPESMARER NRSIINELVR LHKQYLDGRL PAYDGRKGMF TAAPLPFKTK EFLVKVSNPE RGYQGEKEYK VTIKEVAKLD LYNLQQFLAG
0301: RQRELPQDTL QALDIALRET PTAKFTPISR SFFSKSFGHD GDIGSGVECW RGYYQSLRPT QMGLSLNIDI SATAFYKAQP VMNFALEYLN IRGDAPRRLF
0401: DQDRLKLKKA LKGVRVVATH RPDISIRYKI TGITSAPLNE LTFDLDGTRV SVVQYFKRQY DYSLKYIQWP CLQAGSDSRP TYLPMEVCNI LGGQRYSRKL
0501: NERQVTNILR LACERPERRE GSTVEVINRN NYGIDDNAKE FGIKVMSQLA LVDARVLPPP RLKYHQSGRE QICNPSVGQW NMNNKRMISG GSIRHWACIS
0601: FGSRLHWNDV SVFCNNLVDT CNKMGMQVSE TPCVDIVQAR QVNLEAVKNI YRQSSQVLSQ QGLAGQNLEL LIVVLPEGTP SDCYGRVKRL CETELGLITQ
0701: CCLPKHVQKA GSQYLQNMAL KINVKVGGRN TVLENALLRR IPLLTDKPTI IFGADVTHPS PGEDVSPSIA AVVASMDWPE VSKYTCLVSS QGHREEIIAD
0801: LFTEVKDPQK GVIYGGMIRE LLLSFYKANN SCKPGRIIFY RDGVSEGQFS QVLLYEMDAI YRACSSLENG YLPQVTFVVV QKRHHTRLFP EDHRSGALAD
0901: RSGNVLPGTV VDTKICHPSE FDFYLCSHAG IQGTSRPTHY HVLFDDNNFT ADALQTLTYN LCYTYVRCTR SVSIVPPAYY AHLAASRARH YLDENHSDQG
1001: SSSVGGTLRH DQAVPVKPLP KVKESVRQFM FYC
0101: ERPGGAGRGR PPATAHVEAL SGEMERRLAV SQAVQGSSSS APAPAATGAQ ESSQVAVAVP PRNLPPASSK STEFPARPGY GTVGKRCRVR ANHLLVQVAD
0201: KLEMYHYDVS ISPESMARER NRSIINELVR LHKQYLDGRL PAYDGRKGMF TAAPLPFKTK EFLVKVSNPE RGYQGEKEYK VTIKEVAKLD LYNLQQFLAG
0301: RQRELPQDTL QALDIALRET PTAKFTPISR SFFSKSFGHD GDIGSGVECW RGYYQSLRPT QMGLSLNIDI SATAFYKAQP VMNFALEYLN IRGDAPRRLF
0401: DQDRLKLKKA LKGVRVVATH RPDISIRYKI TGITSAPLNE LTFDLDGTRV SVVQYFKRQY DYSLKYIQWP CLQAGSDSRP TYLPMEVCNI LGGQRYSRKL
0501: NERQVTNILR LACERPERRE GSTVEVINRN NYGIDDNAKE FGIKVMSQLA LVDARVLPPP RLKYHQSGRE QICNPSVGQW NMNNKRMISG GSIRHWACIS
0601: FGSRLHWNDV SVFCNNLVDT CNKMGMQVSE TPCVDIVQAR QVNLEAVKNI YRQSSQVLSQ QGLAGQNLEL LIVVLPEGTP SDCYGRVKRL CETELGLITQ
0701: CCLPKHVQKA GSQYLQNMAL KINVKVGGRN TVLENALLRR IPLLTDKPTI IFGADVTHPS PGEDVSPSIA AVVASMDWPE VSKYTCLVSS QGHREEIIAD
0801: LFTEVKDPQK GVIYGGMIRE LLLSFYKANN SCKPGRIIFY RDGVSEGQFS QVLLYEMDAI YRACSSLENG YLPQVTFVVV QKRHHTRLFP EDHRSGALAD
0901: RSGNVLPGTV VDTKICHPSE FDFYLCSHAG IQGTSRPTHY HVLFDDNNFT ADALQTLTYN LCYTYVRCTR SVSIVPPAYY AHLAASRARH YLDENHSDQG
1001: SSSVGGTLRH DQAVPVKPLP KVKESVRQFM FYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.