Factsheet for Os03t0449200-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G414800.1	Wheat	nucleus	72.42	81.26
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	77.58	80.34
TraesCS2B01G434000.1	Wheat	nucleus	79.58	79.43
EER92100	Sorghum	cytosol	77.39	78.51
Zm00001d029573_P001	Maize	cytosol	76.43	77.62
TraesCS2D01G412100.1	Wheat	plastid	78.82	73.95
GSMUA_Achr7P26400_001	Banana	cytosol	43.8	72.06
VIT_03s0038g00830.t01	Wine grape	nucleus	59.73	62.54
VIT_01s0113g00500.t01	Wine grape	nucleus	58.97	61.62
KRH74941	Soybean	nucleus	58.87	59.96
KRH70802	Soybean	nucleus	58.87	59.84
PGSC0003DMT400062439	Potato	nucleus	55.92	58.48
Solyc01g010970.2.1	Tomato	nucleus	55.73	58.4
CDY51501	Canola	nucleus	48.76	56.84
Bra003999.1-P	Field mustard	nucleus	52.67	56.27
CDY07349	Canola	nucleus	52.29	55.69
CDY28550	Canola	cytosol, plastid	51.72	55.53
AT1G69440.1	Thale cress	cytosol	52.0	55.05
Os03t0682200-00	Rice	nucleus	19.94	44.95
Os07t0265600-01	Rice	cytosol, nucleus	12.02	40.78
Os07t0471300-01	Rice	nucleus	25.86	36.47
Os03t0682600-00	Rice	nucleus	25.29	35.48
Os06t0597400-01	Rice	cytosol	32.73	35.04
Os02t0831600-01	Rice	extracellular	32.82	34.03
Os06t0729300-01	Rice	nucleus	32.54	32.85
Os02t0672200-01	Rice	cytosol	33.21	32.16
Os04t0566500-04	Rice	nucleus	33.68	32.06
Os03t0800200-01	Rice	plasma membrane	32.25	31.95
Os04t0615700-01	Rice	nucleus, plasma membrane	30.82	31.24
Os07t0188000-01	Rice	nucleus	30.73	30.61
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	13.26	30.42
Os02t0169400-01	Rice	nucleus	24.9	29.79
Os01t0275600-01	Rice	nucleus	24.43	28.32
Os04t0151800-02	Rice	nucleus	24.52	28.21
Os01t0275200-00	Rice	golgi, peroxisome, plastid	10.59	23.77
Os02t0616300-00	Rice	vacuole	7.16	22.66
Os03t0789500-01	Rice	cytosol	0.29	1.32
Os04t0615800-01	Rice	nucleus	0.19	0.38

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	EntrezGene:4333232	ProteinID:AAS01930.1
EMBL:AB353924	ProteinID:ABF96954.1	InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N	ProteinID:BAF12387.2
ProteinID:BAS84901.1	EMBL:EF486281	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009791
GO:GO:0009987	GO:GO:0010050	GO:GO:0010267	GO:GO:0010492	GO:GO:0010599	GO:GO:0016246
GO:GO:0031047	GO:GO:0040029	GO:GO:0040034	GO:GO:0051607	GO:GO:0060145	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	EnsemblPlantsGene:Os03g0449200	EnsemblPlants:Os03t0449200-00	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF9	InterPro:Piwi	UniProt:Q75HC2	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098
UniParc:UPI0001503228	RefSeq:XP_015629412.1	SEG:seg	:	:	:

Description

SHOOTLESS 4Similar to Protein argonaute 7. (Os03t0449200-00)

Coordinates

chr3:+:19244015..19248324

Molecular Weight (calculated)

117505.0 Da

IEP (calculated)

9.788

GRAVY (calculated)

-0.380

Length

1048 amino acids

Sequence
(BLAST)

0001: MEGEREGVVA KNEDNAGGGG GGLGTGGNGG GGGGGSANGR RRWRGGGSSG YRQHPIIQAY PALLPLPING ATGHAHINGA VSLPLPLPPP VLLYLQPPPP
0101: PPLLPLLPKV AAATFYGKPP KAADAAPRGS MWKHRPSKKP PPHAITAALL PLPRDGKALQ EKIFFANERK TSEKEVNHVD THEKFTVAPL DNAIARRPDM
0201: GGVEGAEIPL SANHFLVQFD PGQKIFHYNV DISPRPSKET ARMIKKKLVE ENPSVLSGSQ PAFDGRKNLY SPVRFQEDRV EFFVSLPVAL ARCSVVKEDT
0301: GHMLDKQKLK TFKVNVRLVS KLCGEDLNKY LNEDKDGIPL PQDYLHALDV VLREGAMESS ILVGRSLYAR SMGEARDIGG GAVGLRGFFQ RLRPTKQGLA
0401: LNVDLSLSAF HESTGIISYL QKRCDFLKDL PQKKTRALAE EEHREVEKAL KNIRVFVCHR ETNQRYHVHS LTKETTENLK FRDRSGKDLM VVDYFKEHYN
0501: HDIQFRNLPC LQIGRSKPCY VPMELCVVCE GQKFLGKLSD EQTSKILKMG CERPSERKGI IKGVVKGAFH ARSDTYADQF SLQVSKHMTK LSGRVLLPPK
0601: LKLGSSGRIK DITPDRFDRQ WSFLDSHVAE GSKIKSWALI SFGGTPEQHF CITKFVNQLS NRCEQLGILL NKKTIISPIF ERIQLLNNVG ILEGKLKKIQ
0701: EAASGNLQLL ICVMERRHQG YADLKRIAET SIGVVTQCCL YSNLSKLTSQ FLTNLALKIN AKLGGCNIAL YSSFPCQIPR IFLSEEPVMF MGADVTHPHP
0801: LDDSSPSVVA VVASMNWPSA NKYISRMRSQ THRKEIIEQL DVMAGELLEE FLKEVGKLPS RIIFFRDGVS ETQFYKVLKE EMHAVRTTCS RYPGYKPLIT
0901: FIVVQKRHHT RLFHRERNGS SSHYSDQNIP PGTVVDTVIT HPREFDFYLC SHWGTKGTSR PTHYHVLWDE NNFRSDEVQQ LIHNLCYTFA RCTRPVSLVP
1001: PAYYAHLAAY RGRLYLERSD TTMYRVSPLQ TVPLPKLRDN VKRLMFYC

Best Arabidopsis Sequence Match ( AT1G69440.1 )
(BLAST)

001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC

Arabidopsis Description

AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.