Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P13970_001 | Banana | nucleus | 79.83 | 81.04 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 58.36 | 80.82 |
| GSMUA_Achr1P17950_001 | Banana | nucleus | 77.32 | 78.86 |
| Solyc03g098280.2.1 | Tomato | nucleus | 71.19 | 78.16 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 76.3 | 77.16 |
| GSMUA_Achr1P07120_001 | Banana | cytosol | 75.19 | 76.54 |
| PGSC0003DMT400069313 | Potato | cytosol | 74.91 | 76.47 |
| Solyc06g072300.2.1 | Tomato | nucleus | 74.81 | 76.38 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.75 | 75.51 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 75.93 | 75.3 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 68.49 | 75.2 |
| AT1G48410.2 | Thale cress | nucleus | 71.38 | 73.14 |
| CDY41831 | Canola | nucleus | 70.72 | 72.89 |
| CDY68174 | Canola | nucleus | 71.19 | 72.81 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 16.54 | 71.77 |
| GSMUA_Achr6P05310_001 | Banana | nucleus | 61.62 | 71.44 |
| Bra014136.1-P | Field mustard | nucleus | 71.38 | 71.18 |
| PGSC0003DMT400079716 | Potato | nucleus | 74.54 | 71.16 |
| GSMUA_Achr4P30720_001 | Banana | nucleus | 60.97 | 70.31 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 69.8 | 69.15 |
| Bra032254.1-P | Field mustard | nucleus | 71.38 | 69.13 |
| GSMUA_Achr7P13220_001 | Banana | cytosol | 59.2 | 67.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.47 | 61.84 |
| GSMUA_Achr4P17670_001 | Banana | extracellular, plasma membrane | 17.1 | 51.25 |
| GSMUA_Achr6P04510_001 | Banana | nucleus | 50.46 | 43.9 |
| GSMUA_Achr7P26400_001 | Banana | cytosol | 22.86 | 38.62 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 30.86 | 36.28 |
| GSMUA_Achr9P22630_001 | Banana | nucleus | 30.2 | 36.27 |
| GSMUA_Achr9P27810_001 | Banana | plastid | 27.14 | 33.52 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSMUA_Achr3G27070_001 |
| EnsemblPlants:GSMUA_Achr3P27070_001 | EnsemblPlants:GSMUA_Achr3T27070_001 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | UniProt:M0SI73 |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 |
| PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 |
| PANTHER:PTHR22891:SF102 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 |
| SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI000294C4CF | SEG:seg | : |
Description
Protein argonaute 1B [Source:GMGC_GENE;Acc:GSMUA_Achr3G27070_001]
Coordinates
chr3:+:26673724..26683909
Molecular Weight (calculated)
120417.0 Da
IEP (calculated)
9.691
GRAVY (calculated)
-0.465
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKRRTELP GSRENIETRE SIGSSQPAVP THRLETNPTS QQQRAGAGHG WVPSNPLLPQ QAGRGSAGYQ GHGGWRPHGV PAPQQPGAPA HDVPGRSGVS
0101: PSAAGPSRPP APELHQAMQA PYQVAQASLS QGRSPWHHET SSAQTATSFE QLSVQDTATS SQDIQPVVSP PSSSKSIRFP LRPGKGSFGD KCVVKANHFL
0201: AELPDRDLHQ YDVSITPEVA SRGVNRAVME QLVRLYRESY LGGRLPAYDG RKSLYTAGPL PFASREFHIT LTDGEDGTDI KRHQRTFRVV IKFAARADLH
0301: HLEMFLTGRQ PDAPQEALQV LDIVLRELPT ARYLPVGRSF YSPDLGRRQS LTEGLESWRG FYQSIRPTQM GLSLNIGIIL LNTKMDMCST AFIEPLHVID
0401: YVTQLLNRDV RSRPLSDADR VKIKKALRGV KVEVTHRGNM RRKYRISGLT LQATRELTFP VDERGTMKYV VQYFQDTYGF TIQHTNLPCL QVGNTQRPNY
0501: LPMEVCKIVD GQRYSKRLNE KQITALLRVT CQRPHERERD IIQARPERLA SFPSDTLQRG TVHQNAYHED PYAKEFGIKI SQKLASVEAR ILPAPWLKYH
0601: DTGREKDCLP RIGQWNMMNK KMVNGGRVNN WTCINFSRNV YENVAHGFCH ELAKMCQISG MEFALEPVLP PLSARPDQVE RALKSCYHDA MNILQPLGKE
0701: LDLLIVILPD NNGPLYGDLK RICETDLGLV SQCCLTKHVF KKNKQYLANV ALKINVKVGG RNTVLMDALS RRIPLVSDRP TIIFGADVTH PHPGEDSSPS
0801: IAAVVASQDW PEITKYAGLV SAQAHRQELI QDLFKVWQDP HRGTITGGMI KDLLISFKRS TGIKPQRIIF YRDGVSEGQF YQVLLYELDA IRKACASLEP
0901: NYQPPVTFVV VQKRHHTRLF ANNYNDQRSI DKSGNILPGT VVDSKICHPT EFDFYLCSHA GIQGTSRPAH YHVLWDENKF TADALQTLTN NLCYTYARCT
1001: RSVSIVPPAY YAHLAAFRAR FYMEPETSDS GSRASGPAGR GSLASGPRSS TRVHGSGSVR PLPALKDNVK KVMFYC
0101: PSAAGPSRPP APELHQAMQA PYQVAQASLS QGRSPWHHET SSAQTATSFE QLSVQDTATS SQDIQPVVSP PSSSKSIRFP LRPGKGSFGD KCVVKANHFL
0201: AELPDRDLHQ YDVSITPEVA SRGVNRAVME QLVRLYRESY LGGRLPAYDG RKSLYTAGPL PFASREFHIT LTDGEDGTDI KRHQRTFRVV IKFAARADLH
0301: HLEMFLTGRQ PDAPQEALQV LDIVLRELPT ARYLPVGRSF YSPDLGRRQS LTEGLESWRG FYQSIRPTQM GLSLNIGIIL LNTKMDMCST AFIEPLHVID
0401: YVTQLLNRDV RSRPLSDADR VKIKKALRGV KVEVTHRGNM RRKYRISGLT LQATRELTFP VDERGTMKYV VQYFQDTYGF TIQHTNLPCL QVGNTQRPNY
0501: LPMEVCKIVD GQRYSKRLNE KQITALLRVT CQRPHERERD IIQARPERLA SFPSDTLQRG TVHQNAYHED PYAKEFGIKI SQKLASVEAR ILPAPWLKYH
0601: DTGREKDCLP RIGQWNMMNK KMVNGGRVNN WTCINFSRNV YENVAHGFCH ELAKMCQISG MEFALEPVLP PLSARPDQVE RALKSCYHDA MNILQPLGKE
0701: LDLLIVILPD NNGPLYGDLK RICETDLGLV SQCCLTKHVF KKNKQYLANV ALKINVKVGG RNTVLMDALS RRIPLVSDRP TIIFGADVTH PHPGEDSSPS
0801: IAAVVASQDW PEITKYAGLV SAQAHRQELI QDLFKVWQDP HRGTITGGMI KDLLISFKRS TGIKPQRIIF YRDGVSEGQF YQVLLYELDA IRKACASLEP
0901: NYQPPVTFVV VQKRHHTRLF ANNYNDQRSI DKSGNILPGT VVDSKICHPT EFDFYLCSHA GIQGTSRPAH YHVLWDENKF TADALQTLTN NLCYTYARCT
1001: RSVSIVPPAY YAHLAAFRAR FYMEPETSDS GSRASGPAGR GSLASGPRSS TRVHGSGSVR PLPALKDNVK KVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.