Factsheet for GSMUA_AchrUn_randomP09260_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	60.62	83.01
GSMUA_Achr3P13970_001	Banana	nucleus	82.14	82.45
GSMUA_Achr1P07120_001	Banana	cytosol	79.89	80.42
GSMUA_Achr1P17950_001	Banana	nucleus	78.38	79.05
Solyc03g098280.2.1	Tomato	nucleus	72.65	78.88
Solyc06g072300.2.1	Tomato	nucleus	76.03	76.76
PGSC0003DMT400069313	Potato	cytosol	75.94	76.66
VIT_17s0053g00680.t01	Wine grape	nucleus	77.91	76.41
GSMUA_Achr3P27070_001	Banana	nucleus	77.16	76.3
GSMUA_AchrUn_...	Banana	cytosol	14.0	76.02
CDY04311	Canola	cytosol, nucleus, plastid	69.74	75.71
GSMUA_Achr7P04100_001	Banana	extracellular	17.01	72.98
AT1G48410.2	Thale cress	nucleus	71.71	72.67
CDY68174	Canola	nucleus	71.52	72.34
GSMUA_Achr6P05310_001	Banana	nucleus	63.06	72.31
CDY41831	Canola	nucleus	70.68	72.03
GSMUA_Achr4P30720_001	Banana	nucleus	62.41	71.17
Bra014136.1-P	Field mustard	nucleus	71.33	70.34
PGSC0003DMT400079716	Potato	nucleus	74.34	70.19
GSMUA_Achr7P13220_001	Banana	cytosol	60.9	68.5
Bra032254.1-P	Field mustard	nucleus	71.43	68.41
CDY23683	Canola	cytosol, nucleus, plastid	69.55	68.14
GSMUA_AchrUn_...	Banana	cytosol	17.86	62.5
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	17.2	50.97
GSMUA_Achr6P04510_001	Banana	nucleus	50.0	43.01
GSMUA_Achr7P26400_001	Banana	cytosol	22.84	38.15
GSMUA_Achr9P05150_001	Banana	nucleus	30.55	35.52
GSMUA_Achr9P22630_001	Banana	nucleus	29.79	35.38
GSMUA_Achr9P27810_001	Banana	plastid	27.07	33.07

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSMUA_AchrUn_randomG09260_001
EnsemblPlants:GSMUA_AchrUn_randomP09260_001	EnsemblPlants:GSMUA_AchrUn_randomT09260_001	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M0U7N6
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486
PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF102
InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0002950005	SEG:seg	:	:

Description

Protein argonaute 1B [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09260_001]

Coordinates

chrchrUn_random:+:43037280..43048055

Molecular Weight (calculated)

119734.0 Da

IEP (calculated)

9.533

GRAVY (calculated)

-0.385

Length

1064 amino acids

Sequence
(BLAST)

0001: MLSLRDSITR LALTSRLEAV LDAFYRRCHF LGVFSRADSS SSLLLTFPFP TLPLWIQQIE RKGVSEAVFG GDKQICYPVV WSSDHVANMV RKRRTELPSA
0101: GESSESQESS GRSGRAGPQR PLERAPAMQQ QGRGAGRGWV QHGQQSRASS QASSSQQSEA SSIQQQFQQL SIEGETASQT IQPVVPVAPS SKSLRFPLRP
0201: GKGSYGVKCV VKANHFFAEL PDKDLHQYDV SIIPEVTSRG VNRAVMEQLV KLHRESYLGG RLPAYDGRKS LYTAGPLPFT SREFQILLVD EDDGSGTERR
0301: QRTFRVVIKL AARVDLHHLD MFLSGRQADA PQEALQVLDI VLRELPTTRY FPVGRSFYSP DLGRRQPLGD GLESWRGFYQ SIRPTQMGLS LNIDMSSTAF
0401: IEPLPVIDFV TQLLSRDVRA RPLSDADRVK IKKALRGVKV EVTHRGNMRR KYRISGLTSQ ATRELTFPVD ERGTMKSVVQ YFQETYGFTI QHTNLPCLQV
0501: GNQQRPNYLP MEVCKIVEGQ RYSKRLNERQ ITALLKVTCQ RPQERELDIL QTVHHNAYHE DPYAREFGIK ISEKLASVEA RILPAPWLKY HDTGREKDCL
0601: PRIGQWNMMN KKMVNGGRVN NWTCINFARN VQERVAREFC HEVALMCQTS GMDFSLEPVL PPLSARPDQV ERALKAQYHD AMSLLQPHGK ELDLLIVILP
0701: DNNGSLYGDL KRICETELGL ISQCCLTKHV FRMSKQYLAN VALKINVKVG GRNTVLMDAL SRRIPLVSDR PTIIFGADVT HPHPGEDSSP SIAAVVASQD
0801: WPEVTKYAGL VSAQLHRQEL IQDLFKVWQD PQRGTVTGGM IKELLISFKK ATGQKPQRII FYRDGVSEGQ FYQVLLYELD AIRKACASLE PNYQPPVTFI
0901: VVQKRHHTRL FANNHNDHHS IDKSGNILPG TVVDSKICHP TEFDFYLCSH AGIQGTSRPA HYHVLWDENK FTADALQTLT NNLCYTYARC TRSVSIVPPA
1001: YYAHLAAFRA RFYMEPETSD SGSMVSGAVG RGAPTQRSTR VPGGAAVRPL PALKENVKKV MFYC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.