Factsheet for GSMUA_Achr1P07120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P13970_001	Banana	nucleus	80.23	80.0
GSMUA_AchrUn_...	Banana	mitochondrion	80.42	79.89
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	58.66	79.79
GSMUA_Achr1P17950_001	Banana	nucleus	77.01	77.16
Solyc03g098280.2.1	Tomato	nucleus	70.29	75.82
Solyc06g072300.2.1	Tomato	nucleus	75.31	75.52
PGSC0003DMT400069313	Potato	cytosol	75.12	75.33
GSMUA_Achr3P27070_001	Banana	nucleus	76.54	75.19
VIT_17s0053g00680.t01	Wine grape	nucleus	76.82	74.84
GSMUA_AchrUn_...	Banana	cytosol	13.81	74.49
CDY04311	Canola	cytosol, nucleus, plastid	67.17	72.45
AT1G48410.2	Thale cress	nucleus	71.81	72.29
CDY68174	Canola	nucleus	71.14	71.48
CDY41831	Canola	nucleus	70.29	71.17
GSMUA_Achr7P04100_001	Banana	extracellular	16.56	70.56
PGSC0003DMT400079716	Potato	nucleus	74.65	70.01
GSMUA_Achr6P05310_001	Banana	nucleus	61.31	69.83
Bra014136.1-P	Field mustard	nucleus	70.96	69.51
GSMUA_Achr4P30720_001	Banana	nucleus	60.93	69.02
Bra032254.1-P	Field mustard	nucleus	70.58	67.15
CDY23683	Canola	cytosol, nucleus, plastid	68.87	67.03
GSMUA_Achr7P13220_001	Banana	cytosol	59.32	66.28
GSMUA_AchrUn_...	Banana	cytosol	17.88	62.17
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	17.03	50.14
GSMUA_Achr6P04510_001	Banana	nucleus	50.61	43.25
GSMUA_Achr7P26400_001	Banana	cytosol	22.52	37.36
GSMUA_Achr9P05150_001	Banana	nucleus	31.22	36.07
GSMUA_Achr9P22630_001	Banana	nucleus	30.18	35.6
GSMUA_Achr9P27810_001	Banana	plastid	27.44	33.3

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSMUA_Achr1G07120_001	EnsemblPlants:GSMUA_Achr1P07120_001
EnsemblPlants:GSMUA_Achr1T07120_001	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M0RXS0	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI000295F3F5	SEG:seg	:	:	:

Description

Protein argonaute 1A [Source:GMGC_GENE;Acc:GSMUA_Achr1G07120_001]

Coordinates

chr1:-:5633224..5641557

Molecular Weight (calculated)

118318.0 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.410

Length

1057 amino acids

Sequence
(BLAST)

0001: MVRNHRIELP DAGDSSIFHE TSGGSGRVFR QHLPERATAS QQRVRGSGRD WGPAIPLHSQ QGCGFGSYYR RRGSGQPHGA SVPQQPCGPS PGYDGLGLPL
0101: RRRGMPPQQQ YGHRGGASLS SGHVADPSAA GPLRLPAPDL HQASSQASSS WHSEDSSTEK FQQCFVEDGV TTQAIQTVIP VAPSSKSLRF PLRPGKGSCG
0201: VKCVVKANHF VAELPDKDLH QYDVSITPEV ISRGVNRAVM EQLVRQHRKS CLGGRLPVYD GRKSLYTAGP LPFTFREFQI ILVDEDDGSG KERKQRPFKV
0301: VIKFAARVDL HHLEMFLSGR QADAPQEALQ VLDIVLRERP TTRYFPVGRS FYSPDLGRRQ PLGDGLESWR GFYQSIRPTQ MGLSLNIDMS SSAFIEPLPV
0401: IDFVTQLINR DVRARQLSDA DRVKIKKALR GVKVEVTHRG NMRRKYRISG LTSQATRELT FPVDERGTMK FVVEYFQETY GFTIKHTNLP CLQVGSQQRS
0501: NYLPLEVCKI VEGQRYSKRL NEKQITALLK VTCQRPHDRV LDILQTVHHN AYHEDPYARE FGIKISDRLA SVEARVLPAP WLKYHDNGRE RDCLPRIGQW
0601: NMMNKKVVNG GIVNNWTCIN FARNVQESVA RDFCHELALM CQTSGMVFSL EPVLHPLSAR PDQVVRALKA LCHDARSILQ PQGKELDLLI VILPDNNGSL
0701: YGDLKRICET ELGLISQCCL TKHVSRMNKQ QYLANVALKI NVKVGGRNTV LVDALSGRIP LVSDRPTIIF GADVTHPHPG EDTSPSIAAV VASQDWPEIT
0801: KYAGLVSAQA HRQELIQDLF KVWQDPQRGT VTGGMIKELL ISFKRATGQK PQRIIFYRDG VSEGQFYQVL LYELDAIRKA CASLEPNYQP PVTFIVVQKR
0901: HHTRLFASNH KDQRSFDKNE NILPGTVVDS KICHPTEFDF YLCSHAGIQG TSRPAHYHVL WDENKFTADT LQTLTNNLCY TYARCTRSVS IVPPAYYAHL
1001: AAFRARFYME PETSDNGSMA SGAVGRAQRG GRLLGGGAPV RPLPALKENI KKVMFYC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.