Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G178100.2 | Wheat | plastid | 96.53 | 96.84 |
| TraesCS6B01G206700.1 | Wheat | plastid | 96.11 | 96.41 |
| HORVU6Hr1G036840.2 | Barley | plastid | 95.37 | 95.57 |
| TraesCS7D01G351700.1 | Wheat | cytosol | 78.55 | 78.47 |
| GSMUA_Achr6P05310_001 | Banana | nucleus | 74.03 | 75.86 |
| GSMUA_Achr4P30720_001 | Banana | nucleus | 74.34 | 75.78 |
| GSMUA_Achr7P13220_001 | Banana | cytosol | 70.56 | 70.93 |
| VIT_11s0016g04620.t01 | Wine grape | cytosol | 66.46 | 69.83 |
| KRH03770 | Soybean | nucleus | 65.51 | 68.99 |
| KRH54842 | Soybean | nucleus | 65.51 | 68.54 |
| KRH63036 | Soybean | cytosol | 65.51 | 68.54 |
| KRH56656 | Soybean | cytosol | 65.4 | 68.5 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 32.18 | 67.25 |
| Solyc12g006790.1.1 | Tomato | nucleus | 65.83 | 67.1 |
| PGSC0003DMT400053301 | Potato | nucleus | 63.72 | 65.87 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 33.02 | 65.55 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 61.72 | 56.94 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 65.62 | 56.78 |
| TraesCS6D01G403900.1 | Wheat | plastid | 62.15 | 56.02 |
| TraesCS4D01G024300.1 | Wheat | cytosol | 32.28 | 55.82 |
| TraesCS4D01G024100.1 | Wheat | plastid | 49.53 | 54.96 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 63.62 | 54.36 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 65.72 | 51.65 |
| TraesCS5D01G454600.1 | Wheat | cytosol | 39.64 | 50.88 |
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 44.16 | 50.0 |
| TraesCS1D01G151300.3 | Wheat | plastid | 44.37 | 49.71 |
| TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 50.68 | 45.77 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 49.63 | 45.52 |
| TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 23.13 | 41.75 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 18.4 | 37.55 |
| TraesCS5D01G169500.1 | Wheat | cytosol | 32.18 | 34.69 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 32.07 | 33.08 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 31.55 | 33.0 |
| TraesCS5D01G192700.2 | Wheat | nucleus | 31.65 | 31.92 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 31.97 | 30.34 |
| TraesCS2D01G412100.1 | Wheat | plastid | 33.33 | 28.38 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 5.26 | 27.47 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 30.18 | 27.39 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 25.24 | 22.71 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF45 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS6D01G166300 |
| EnsemblPlants:TraesCS6D01G166300.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6D:+:147875568..147882078
Molecular Weight (calculated)
106262.0 Da
IEP (calculated)
9.640
GRAVY (calculated)
-0.322
Length
951 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEVLEVPWT VVGGKAAGGC PGPPRRQALQ SSLAQPKAAA RSPGAGGKKC NSGASGPRRN GARARSKEEA VVPAACTGVV AVAPAEPPPV SSKGLELCRR
101: PGFGRAGTRC VVKANHFLAE VADKDLTQYD VKITPEVRSR SMNRAIVAEL VRLYRASDLG MRLPAYDGRS NLYTAGRLPF DAREFVIRLA VDDDGVSGAT
201: ARCTCREKEY KVAIKFAAGA DLRHLREFMA GRQPDEPQGA LQVLDVVLRE VASQRYLSVR RSFYSPDIRT PQRLGDGLQS WFGFYQSIRP TQMGLSLNID
301: MSSTAFVEPL PVIDFAAQIV GKDVMSRPLS DANRVRIKKA LRDLKVEITH RGSLRRKYRV FGLTAQPTHE LIFPIDDEMK SVVEYFTEMY GFTIKQPHLP
401: CLLVGNQKKP NYLPMEACKI VEGQRYKKRL NEKQITSLLK VTCQRPGDKE MDIRRTVHQN GYDQDPYAKE FGINISDKLT SIEARVLPAP WLKYHDTGKE
501: SECLPRVGQW DMKNKKVVNG CIVNHWASIN FSRSVQESTA SGFCQELAQT CKLLGMEFNS EPAIPMYSAR PEQAVQVLKH VYNAALKKLK GKELELLLVI
601: LPDNNGALYG DIKRICETEL GLMSQCCLAK HVFKICKRYL ANVSLKINVK MGGRNTILLD AVSRRIPLVS DIPTIIFGAD VTHPETREDN SPSIAAVVAS
701: QDWPEVTKYA GLVCAQAYRQ ELIQDLYKTW HDPQRGTVTG GMIRELLISF RKATGQKPLR IIFYRDGISA GQFHQVLLYE LDAIRKACAS LEPNYQPPVT
801: FVIVQKRHHT KLFANNHNDK SNTDKSGNIL PGTVVDSKIC HPTQFDFYLC SHAGIQGTSK PAHYHVLWDE NNFTADEMQT LTNNLCYTYA RCTRSVSVVP
901: PVYYAHLAAF RARFYMDQDS LSVKNANRTN GSAMKTMPAV KERVKRVMFY C
101: PGFGRAGTRC VVKANHFLAE VADKDLTQYD VKITPEVRSR SMNRAIVAEL VRLYRASDLG MRLPAYDGRS NLYTAGRLPF DAREFVIRLA VDDDGVSGAT
201: ARCTCREKEY KVAIKFAAGA DLRHLREFMA GRQPDEPQGA LQVLDVVLRE VASQRYLSVR RSFYSPDIRT PQRLGDGLQS WFGFYQSIRP TQMGLSLNID
301: MSSTAFVEPL PVIDFAAQIV GKDVMSRPLS DANRVRIKKA LRDLKVEITH RGSLRRKYRV FGLTAQPTHE LIFPIDDEMK SVVEYFTEMY GFTIKQPHLP
401: CLLVGNQKKP NYLPMEACKI VEGQRYKKRL NEKQITSLLK VTCQRPGDKE MDIRRTVHQN GYDQDPYAKE FGINISDKLT SIEARVLPAP WLKYHDTGKE
501: SECLPRVGQW DMKNKKVVNG CIVNHWASIN FSRSVQESTA SGFCQELAQT CKLLGMEFNS EPAIPMYSAR PEQAVQVLKH VYNAALKKLK GKELELLLVI
601: LPDNNGALYG DIKRICETEL GLMSQCCLAK HVFKICKRYL ANVSLKINVK MGGRNTILLD AVSRRIPLVS DIPTIIFGAD VTHPETREDN SPSIAAVVAS
701: QDWPEVTKYA GLVCAQAYRQ ELIQDLYKTW HDPQRGTVTG GMIRELLISF RKATGQKPLR IIFYRDGISA GQFHQVLLYE LDAIRKACAS LEPNYQPPVT
801: FVIVQKRHHT KLFANNHNDK SNTDKSGNIL PGTVVDSKIC HPTQFDFYLC SHAGIQGTSK PAHYHVLWDE NNFTADEMQT LTNNLCYTYA RCTRSVSVVP
901: PVYYAHLAAF RARFYMDQDS LSVKNANRTN GSAMKTMPAV KERVKRVMFY C
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.