Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G419500.1 | Wheat | nucleus | 96.12 | 95.4 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 92.81 | 91.77 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 48.34 | 48.76 |
| KRH36727 | Soybean | nucleus | 17.31 | 40.4 |
| PGSC0003DMT400054667 | Potato | cytosol | 26.87 | 38.9 |
| KRG89432 | Soybean | nucleus | 33.11 | 36.23 |
| Solyc02g069270.2.1 | Tomato | cytosol | 32.83 | 35.52 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 31.22 | 34.81 |
| PGSC0003DMT400054669 | Potato | cytosol | 34.25 | 34.44 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 31.69 | 34.22 |
| Solyc02g069260.2.1 | Tomato | nucleus | 33.68 | 34.17 |
| CDY70429 | Canola | plastid | 28.57 | 34.05 |
| Solyc02g069280.2.1 | Tomato | nucleus | 31.88 | 33.73 |
| Bra040815.1-P | Field mustard | cytosol | 32.07 | 33.6 |
| CDY25885 | Canola | cytosol | 32.07 | 33.56 |
| CDY55876 | Canola | cytosol | 32.73 | 33.43 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 31.41 | 33.4 |
| CDY02373 | Canola | nucleus | 31.88 | 32.94 |
| TraesCS4D01G024300.1 | Wheat | cytosol | 17.12 | 32.91 |
| Bra023172.1-P | Field mustard | nucleus | 32.17 | 32.79 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 14.1 | 32.75 |
| AT1G31280.1 | Thale cress | nucleus | 31.41 | 32.74 |
| KRH11732 | Soybean | nucleus | 32.07 | 32.69 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 14.29 | 31.52 |
| PGSC0003DMT400054661 | Potato | nucleus | 28.76 | 31.02 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 13.15 | 29.83 |
| AT1G31290.1 | Thale cress | nucleus | 32.45 | 28.73 |
| TraesCS5D01G454600.1 | Wheat | cytosol | 19.77 | 28.21 |
| TraesCS4D01G024100.1 | Wheat | plastid | 22.71 | 28.0 |
| TraesCS1D01G151300.3 | Wheat | plastid | 22.42 | 27.92 |
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 21.38 | 26.9 |
| TraesCS7D01G351700.1 | Wheat | cytosol | 24.22 | 26.89 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 25.83 | 26.48 |
| TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 13.15 | 26.38 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 25.45 | 25.94 |
| TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 25.54 | 25.64 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 26.4 | 25.39 |
| TraesCS6D01G166300.1 | Wheat | plastid | 22.71 | 25.24 |
| TraesCS6D01G403900.1 | Wheat | plastid | 24.88 | 24.93 |
| TraesCS2D01G412100.1 | Wheat | plastid | 26.02 | 24.62 |
| TraesCS5D01G169500.1 | Wheat | cytosol | 19.77 | 23.7 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 20.62 | 23.64 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 27.06 | 23.64 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 24.88 | 23.63 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 19.77 | 22.99 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 20.25 | 21.36 |
| TraesCS5D01G192700.2 | Wheat | nucleus | 14.66 | 16.44 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 2.37 | 13.74 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:ArgoL1 | InterPro:Argonaute_N |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF16486 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS2D01G416500 |
| EnsemblPlants:TraesCS2D01G416500.1 | TIGR:cd02846 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:530258595..530264928
Molecular Weight (calculated)
117031.0 Da
IEP (calculated)
9.302
GRAVY (calculated)
-0.648
Length
1057 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANRRGGGGS GGRDGARDSG DKRGGGGGRS RGRGGGRAAP PAGGRGPRDE VDETRGGGSA PVGDQNRGGG ASRGLGQYRG GGGVDRDRGA SSYARGGDRR
0101: AGGEDYGRVD NSYGRYQSPG GGGGDPSGSR GRGGRGSGSN GPRDPYHHGG EQGRGAGGGP YGGYQGRGGG DDYYPSRWHG GGRGYHPAPQ EERRRDKYPQ
0201: QYAATPSAKK IPSKEVASPS RPGVRKNGPI EEVEVKLWVN HFSIKFGEST VFHYGVKLAQ VSPEASGGLE LSMADQNFVN AQLLKMLQKS PHSLVASDGK
0301: GNLYSFAKLP EGLSLPVSVG SRAYNASVEF KDELPLRSDQ HVPRNVLQAL DVIVRQASSY EKIIIGQTLY SPHWLVLEGS NHVHVQALGG TKQTLKPTKQ
0401: GLVLCVDYSV MDFCKPESRV LDLVEHLLKR FGRRNHLNVR SPPLEKEEWE YLKSQLRGLC ITVSYQKKSS EEKRDAPTVR KYKVQNLTAE NAEQITFKEF
0501: KVDKSWELVQ YYRQQYGEDI QYKMLPCLVL SKRPDKPNYV PIELCRLHRC QKYPKDSSQE PRRPPPSDER KIMIERMVND GLDGPCRGGN RGEQFKISLD
0601: TQMTEVTGRI LLPPVLKLGD SKELSIRLAN RQWNLQDHKI FEGQSLKCWG VLDFSGQETR FRDAFITKIV SKCNNLGITM SCEPSLVHKS AMLVLSDPDK
0701: LRSELSKAKE AAEEKGQKLQ LLFCPMSELH PGYKTLKLIC EIELGIQTQC LLTQLANKEG KGQDQYLSNL ALKINSKLGG SNMQLSRELP MVTGTRFMFI
0801: GADVNHPPPG DTVSLSIAAV VASMDCPSAS QYVPRIRAQR HRTEEIDNLG TMCKELIQVY MERNGGFKPD KIIYFRDGVS DEQFKMVLDK ELVSMEKGIC
0901: EDDYSPTITV VVAKKRHNTR LFPKDENELQ TTNGNVLPGT VVDTVVVDGS HDDFFLCSHD GLHGTSRPTH YYMLKNGHGF QSVDLQKLVY SMCFVFARCT
1001: KPVSLTAPIK YADITAYRGR DYYDSRMASL QFQAQLQAVE FPELRVHPDL RDKMFFV
0101: AGGEDYGRVD NSYGRYQSPG GGGGDPSGSR GRGGRGSGSN GPRDPYHHGG EQGRGAGGGP YGGYQGRGGG DDYYPSRWHG GGRGYHPAPQ EERRRDKYPQ
0201: QYAATPSAKK IPSKEVASPS RPGVRKNGPI EEVEVKLWVN HFSIKFGEST VFHYGVKLAQ VSPEASGGLE LSMADQNFVN AQLLKMLQKS PHSLVASDGK
0301: GNLYSFAKLP EGLSLPVSVG SRAYNASVEF KDELPLRSDQ HVPRNVLQAL DVIVRQASSY EKIIIGQTLY SPHWLVLEGS NHVHVQALGG TKQTLKPTKQ
0401: GLVLCVDYSV MDFCKPESRV LDLVEHLLKR FGRRNHLNVR SPPLEKEEWE YLKSQLRGLC ITVSYQKKSS EEKRDAPTVR KYKVQNLTAE NAEQITFKEF
0501: KVDKSWELVQ YYRQQYGEDI QYKMLPCLVL SKRPDKPNYV PIELCRLHRC QKYPKDSSQE PRRPPPSDER KIMIERMVND GLDGPCRGGN RGEQFKISLD
0601: TQMTEVTGRI LLPPVLKLGD SKELSIRLAN RQWNLQDHKI FEGQSLKCWG VLDFSGQETR FRDAFITKIV SKCNNLGITM SCEPSLVHKS AMLVLSDPDK
0701: LRSELSKAKE AAEEKGQKLQ LLFCPMSELH PGYKTLKLIC EIELGIQTQC LLTQLANKEG KGQDQYLSNL ALKINSKLGG SNMQLSRELP MVTGTRFMFI
0801: GADVNHPPPG DTVSLSIAAV VASMDCPSAS QYVPRIRAQR HRTEEIDNLG TMCKELIQVY MERNGGFKPD KIIYFRDGVS DEQFKMVLDK ELVSMEKGIC
0901: EDDYSPTITV VVAKKRHNTR LFPKDENELQ TTNGNVLPGT VVDTVVVDGS HDDFFLCSHD GLHGTSRPTH YYMLKNGHGF QSVDLQKLVY SMCFVFARCT
1001: KPVSLTAPIK YADITAYRGR DYYDSRMASL QFQAQLQAVE FPELRVHPDL RDKMFFV
0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
Arabidopsis Description
AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.