CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0265600-01	Rice	cytosol, nucleus	23.44	69.26
VIT_12s0059g01430.t01	Wine grape	nucleus	67.25	66.74
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	15.33	64.81
CDX84712	Canola	nucleus	60.68	63.9
Bra022918.1-P	Field mustard	nucleus	60.57	63.78
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	16.43	63.56
CDX79495	Canola	nucleus	60.35	63.55
Solyc07g049500.2.1	Tomato	nucleus	62.65	63.34
KXG23356	Sorghum	nucleus	59.91	62.09
AT2G32940.1	Thale cress	nucleus	59.04	61.39
TraesCS5D01G169500.1	Wheat	cytosol	58.6	60.66
TraesCS5A01G165900.1	Wheat	cytosol	58.6	60.59
HORVU0Hr1G012490.1	Barley	nucleus	58.16	60.14
GSMUA_Achr9P22630_001	Banana	nucleus	58.71	59.82
TraesCS5B01G162300.1	Wheat	mitochondrion	58.6	59.58
Zm00001d019905_P003	Maize	nucleus	59.47	58.96
KRH73469	Soybean	nucleus	56.85	57.28
KRH14678	Soybean	nucleus	56.41	56.84
GSMUA_Achr9P27810_001	Banana	plastid	51.81	54.31
KRG89867	Soybean	nucleus	56.08	54.07
KRH56276	Soybean	cytosol	43.48	47.77
KRG99173	Soybean	cytosol	6.79	39.74
KRH03770	Soybean	nucleus	32.86	33.22
KRH63036	Soybean	cytosol	32.75	32.89
KRH56656	Soybean	cytosol	32.64	32.82
KRG91384	Soybean	cytosol	34.83	32.65
KRH35431	Soybean	cytosol	34.72	32.55
KRH31645	Soybean	nucleus	33.73	32.46
KRH69078	Soybean	cytosol	34.5	32.41
KRH54842	Soybean	nucleus	32.09	32.23
KRH25139	Soybean	plastid	33.3	31.63
KRH30536	Soybean	plastid	29.79	30.56
KRH09472	Soybean	nucleus	33.84	29.34
KRH38925	Soybean	endoplasmic reticulum	33.95	29.3
KRH36727	Soybean	nucleus	13.47	27.15
KRH70802	Soybean	nucleus	28.7	25.41
KRH74941	Soybean	nucleus	28.37	25.17
KRG89432	Soybean	nucleus	26.51	25.05
KRH11732	Soybean	nucleus	26.73	23.53

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EMBL:ACUP02008289	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_N	EnsemblPlantsGene:GLYMA_13G193200	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	UniProt:K7M0M5	EnsemblPlants:KRH20672	ProteinID:KRH20672	ProteinID:KRH20672.1
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF35	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI000296D2A0	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:30651373..30661214

Molecular Weight (calculated)

101865.0 Da

IEP (calculated)

8.770

GRAVY (calculated)

-0.232

Length

913 amino acids

Sequence
(BLAST)

001: MEVAITRAKG GMTEEVPGIV EAAEPPTSSQ SPADVPHNLE TEQMTPTKYS IISRNGVGTT GKHIPLLVNL FEVAVNVPDT VFFQYSVAIT FEDKQAVESK
101: GIGRKVIDRL YQTYSSELGG KRFVYDGGKT LYTVGPLPLN KYEFKVLLEK SFTKRSAKSP GANGSLHEET KRSKHSFQSK TFMVEISFAT KIPLQSIVIS
201: LKEVESDTNS QDALRVLDTI LRQRAANCGC LLVRQSFFHD DSRNFNDVGA GVTAVSGFHS SFRSTQRGLS LNIDVSTTII IKPGPVIDFL LSNQQVKEPR
301: YIDWEKAKKM LKNLRVQATH HNQEFKISGL SEKPCIQQLF SMKVKNDDNN SRGQTVDITV YEYFAKHCGI ELTSSAYLPC LDVGKPKRPV YLPLELCSLV
401: SLQRYTKVLS LMQRASLVEK SRQKPQDRIK ILKSAVGKCY DDDPVLAACG ISIEKQLNLI EGRVLETPKL KVGKNDDCIP HNGRWNFNKK TLLQASHIDY
501: WAVVNFSASC DTSYISRELI RCGMSKGINI ERPYTLIEEE PQLRKSHPVA RVERMFDLLA SKLNREPKLI LCVLPERKIC DIYGPWKKKC LSEIGVVTQC
601: IAPVKITNQY LTNVLLKINS KLGGINSLLA IEHSGHLPLI KDTPTMILGM DVSHNSLGRL DSPSIAAVVG SRHWPLISRY RASVRMQASK VEMIDALYKP
701: LENGSDDGII RELLLDFYDS SNGRKPTQFI VFRDGVSESQ FEQVLTIELN QIIKAYQHLG EVNVPQFTVI VAQKKHHIKL FLPNGPENVP PGTVVDTTIT
801: HPRNYDFYMC AHAGMLGTSR PVHYHVLLDE IGFSADGLQN LIHSLSYVNQ RSTIATSVVA PICYAHHAAA QMGQLLNFDD SSETGSSPAS EGGIPIPELP
901: RLHRNVRSSM FFC

Best Arabidopsis Sequence Match ( AT2G32940.1 )
(BLAST)

001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC

Arabidopsis Description

AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.