Factsheet for TraesCS5A01G165900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G169500.1	Wheat	cytosol	98.75	98.87
HORVU0Hr1G012490.1	Barley	nucleus	98.07	98.07
TraesCS5B01G162300.1	Wheat	mitochondrion	98.19	96.55
Os07t0265600-01	Rice	cytosol, nucleus	30.46	87.06
KXG23356	Sorghum	nucleus	85.62	85.81
Zm00001d019905_P003	Maize	nucleus	84.82	81.32
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	17.55	65.68
GSMUA_Achr9P22630_001	Banana	nucleus	66.25	65.29
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	15.97	65.28
VIT_12s0059g01430.t01	Wine grape	nucleus	67.16	64.46
Solyc07g049500.2.1	Tomato	nucleus	63.19	61.79
CDX84712	Canola	nucleus	60.25	61.36
Bra022918.1-P	Field mustard	nucleus	60.25	61.36
CDX79495	Canola	nucleus	59.68	60.78
AT2G32940.1	Thale cress	nucleus	59.0	59.34
KRH20672	Soybean	nucleus	60.59	58.6
TraesCS3A01G188400.1	Wheat	nucleus	59.46	57.31
GSMUA_Achr9P27810_001	Banana	plastid	54.25	54.99
TraesCS1A01G445500.1	Wheat	golgi, unclear	57.53	54.92
TraesCS7A01G533100.1	Wheat	cytosol	55.72	54.61
TraesCS7A01G521000.1	Wheat	nucleus	48.13	52.4
TraesCS5A01G446000.1	Wheat	cytosol	34.65	36.04
TraesCS4A01G288000.1	Wheat	cytosol	28.54	35.15
TraesCS4A01G288300.1	Wheat	plastid	33.41	34.42
TraesCS2A01G258200.1	Wheat	cytosol	25.82	34.23
TraesCS6A01G178100.2	Wheat	plastid	34.65	32.28
TraesCS7A01G371200.2	Wheat	cytosol	34.77	31.91
TraesCS7A01G557400.1	Wheat	plastid	36.13	30.91
TraesCS7A01G067500.2	Wheat	cytosol	29.78	30.8
TraesCS2A01G258100.1	Wheat	mitochondrion	29.9	30.14
TraesCS6A01G254600.2	Wheat	plastid	36.35	29.59
TraesCS2A01G403100.4	Wheat	nucleus	36.47	28.75
TraesCS2A01G168900.1	Wheat	cytosol	33.52	28.54
TraesCS3A01G116800.1	Wheat	nucleus	32.84	27.44
TraesCS2A01G419800.2	Wheat	nucleus	21.63	27.09
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	36.81	26.86
TraesCS2A01G414800.1	Wheat	nucleus	27.29	25.8
TraesCS2A01G419900.1	Wheat	nucleus	29.67	24.98
TraesCS2A01G419500.1	Wheat	nucleus	23.22	19.25

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0006342	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016043	GO:GO:0030422	GO:GO:0035197
GO:GO:0040029	GO:GO:0051607	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488
PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF35	InterPro:Piwi	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS5A01G165900
EnsemblPlants:TraesCS5A01G165900.1	TIGR:cd02846	TIGR:cd04657	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:-:354535062..354546075

Molecular Weight (calculated)

98296.8 Da

IEP (calculated)

9.619

GRAVY (calculated)

-0.276

Length

883 amino acids

Sequence
(BLAST)

001: MAAKTGGAVQ VHKNDTVKRT AMARNGLGRE GKPIRLLSNH FAVKLSGIDA VFYQYSVSIK SDDDQVVEGK GIGRKVIDKM LQTYSSELAG KDFAYDGEKC
101: LFTVGPLPQN NFEFTVIMEE TSARAVGGSP GHESPGPGDK KRVKRSHLPK QFIVGISYAA RIPLRSVALA LQGSDLDHAQ DALRVLDIVL RQQQAKRGCL
201: LVRQSFFSDD SRNVVDLTGG VSGCRGLHSS FRTTMNGLSL NMDVSTTMIV TPGPVVNFLL TNQNVRDIRD IDWPKAKRML KNLRVKATHN NMEFKIIRLS
301: DQPCSRQTFP MKVRSGSSEG QTVDITVEEY FKSKQVFLEK PYLPCLDVGK PKRPNYLPIE LANMISLQRY TKALSSQQRT TLVEKSRQKP QDRMRVVTDA
401: VKSNRYDDDP IFSSCGIKID SQLTRVEGRV LSAPMLVVGN SQDCVPFKGR WNYNNKKLFE PVRIERWAIV NFSARCDMSR ISRELINCGR TKGIIIEGPY
501: SLVDEDNQAR RCAPIVRVER MFEKVKANLP GPPEFLLCVL PERKNCDIYG PWKKKNLHEM GIVTQCIVPS AKMNDQYFTN VLLKINAKLG GMNSKLALEH
601: SRKIPVINKI PTIILGMDVS HGSPGRSDIP SIAAVVGSRC WPLISRYRAS VRTQSPKVEM IDSLFKPLDN GKDDGIIREL LLDFYTTSQQ RKPEQIIIFR
701: DGVSESQFSQ VLNLEVDQII KAYQNMGQGP PPKITVIIAQ KNHHTKLFQA DAPDNVPAGT VVDSGIVHPK QYDFYMCAHA GPIGTSRPTH YHVLLDQIGF
801: TADELQSLVL SLSYVYQRST TAISVVAPIC YAHLAAAQMS QFIKFEEFAD TSSGSGVPSS STAATVPELP RLHADVCSSM FFC

Best Arabidopsis Sequence Match ( AT2G32940.1 )
(BLAST)

001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC

Arabidopsis Description

AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.