Factsheet for TraesCS7A01G521000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G324800.1
TraesCS1B01G337800.2
TraesCS1D01G325500.1
TraesCS6A01G123800.1
TraesCS6B01G094400.1
TraesCS6B01G151900.1
TraesCS6D01G113900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27040.1	TraesCS6A01G123800.1	AT2G40030.1	19410546
AT2G27040.1	TraesCS6B01G094400.1	AT2G40030.1	19410546
AT2G27040.1	TraesCS6B01G151900.1	AT2G40030.1	19410546
AT2G27040.1	TraesCS6D01G113900.1	AT2G40030.1	19410546
AT2G27040.1	TraesCS1A01G324800.1	AT5G04290.1	19410546
AT2G27040.1	TraesCS1B01G337800.2	AT5G04290.1	19410546
AT2G27040.1	TraesCS1D01G325500.1	AT5G04290.1	19410546

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G437900.1	Wheat	cytosol	90.88	91.33
TraesCS7B01G437700.1	Wheat	nucleus	90.63	83.62
PGSC0003DMT400070806	Potato	nucleus	23.18	64.38
CDY72062	Canola	plastid	22.19	60.61
HORVU7Hr1G107770.1	Barley	nucleus	43.03	58.36
PGSC0003DMT400039204	Potato	cytosol	10.48	56.67
Os01t0275200-00	Rice	golgi, peroxisome, plastid	31.44	54.6
EES00570	Sorghum	nucleus	59.19	53.45
TraesCS3A01G188400.1	Wheat	nucleus	60.17	53.28
CDX92417	Canola	nucleus	42.17	53.11
Solyc01g008960.2.1	Tomato	nucleus	58.69	52.37
VIT_06s0009g01200.t01	Wine grape	nucleus	58.94	52.35
KRH73469	Soybean	nucleus	58.45	52.32
PGSC0003DMT400058471	Potato	nucleus	58.57	52.26
Solyc06g073540.2.1	Tomato	nucleus	58.82	52.25
PGSC0003DMT400069459	Potato	nucleus	58.82	52.25
KRH14678	Soybean	nucleus	58.32	52.21
GSMUA_Achr9P05150_001	Banana	nucleus	58.57	51.91
TraesCS1A01G445500.1	Wheat	golgi, unclear	59.06	51.78
TraesCS7A01G533100.1	Wheat	cytosol	57.21	51.5
Solyc01g096750.1.1	Tomato	nucleus	55.36	50.96
VIT_08s0040g00070.t01	Wine grape	nucleus	57.21	50.54
Solyc06g073530.1.1	Tomato	nucleus	56.1	50.33
Bra034318.1-P	Field mustard	nucleus	56.47	49.67
AT2G27040.1	Thale cress	nucleus	56.47	49.57
CDY48192	Canola	nucleus	56.35	49.57
CDX77061	Canola	nucleus	56.23	49.46
CDY09103	Canola	nucleus	55.12	49.34
Bra020152.1-P	Field mustard	nucleus	54.99	49.23
CDY04475	Canola	nucleus	55.98	49.19
VIT_13s0175g00140.t01	Wine grape	nucleus	53.51	49.04
CDY56413	Canola	nucleus	55.73	48.97
KRG89867	Soybean	nucleus	56.97	48.79
AT5G21150.1	Thale cress	nucleus	53.76	48.66
CDY16587	Canola	nucleus	52.77	48.53
TraesCS5A01G165900.1	Wheat	cytosol	52.4	48.13
Bra002361.1-P	Field mustard	nucleus	54.01	48.08
CDX92405	Canola	nucleus	54.01	47.87
CDX92406	Canola	nucleus	53.27	47.79
CDY59516	Canola	nucleus	53.14	47.57
AT5G21030.2	Thale cress	cytosol	49.94	47.42
Bra002360.1-P	Field mustard	nucleus	52.9	46.13
KRH56276	Soybean	cytosol	46.24	45.13
CDY16595	Canola	nucleus	45.75	40.33
Solyc03g111760.2.1	Tomato	mitochondrion	44.39	39.3
TraesCS4A01G288000.1	Wheat	cytosol	30.7	34.73
TraesCS2A01G258200.1	Wheat	cytosol	27.87	33.93
TraesCS5A01G446000.1	Wheat	cytosol	35.51	33.92
CDY62055	Canola	nucleus	23.92	33.68
TraesCS4A01G288300.1	Wheat	plastid	33.42	31.62
TraesCS7A01G371200.2	Wheat	cytosol	35.88	30.25
TraesCS6A01G178100.2	Wheat	plastid	34.9	29.85
TraesCS7A01G067500.2	Wheat	cytosol	30.7	29.16
TraesCS2A01G258100.1	Wheat	mitochondrion	31.32	29.0
TraesCS7A01G557400.1	Wheat	plastid	35.51	27.91
TraesCS6A01G254600.2	Wheat	plastid	37.24	27.83
TraesCS2A01G403100.4	Wheat	nucleus	37.36	27.05
TraesCS3A01G116800.1	Wheat	nucleus	35.02	26.87
TraesCS2A01G168900.1	Wheat	cytosol	34.03	26.62
TraesCS2A01G414800.1	Wheat	nucleus	29.1	25.27
TraesCS2A01G419800.2	Wheat	nucleus	21.58	24.82
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	36.87	24.71
Bra002349.1-P	Field mustard	nucleus	51.17	24.4
TraesCS2A01G419900.1	Wheat	nucleus	28.24	21.83
TraesCS2A01G419500.1	Wheat	nucleus	24.54	18.69

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF20	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS7A01G521000	EnsemblPlants:TraesCS7A01G521000.1	TIGR:cd02846	TIGR:cd04657
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:705135411..705141773

Molecular Weight (calculated)

90756.9 Da

IEP (calculated)

9.048

GRAVY (calculated)

-0.348

Length

811 amino acids

Sequence
(BLAST)

001: MKQLHETYAS LLDGKQFAYD GDKSLFTSGP LPFATNDFDV VIDGDALSRK IATSQSPGAD GSPGPSDKKR MKQAGQSKRF KVDITFTAKV PISAIALVLG
101: GGQESENSQE VLRVLDIILR QHAARQNRLL VRQSFFRRDS DCIKLGGGVL GCQGFHSSIR PTQSGLLLNC DLSTTMVVEP GPVIAFLLSN QGVKDTSSID
201: WGKAKRALNK LRIETTHTKA EFRIVGLSEN SCYNQTFPLK QKDGNGTVDV TVYDYFMDRW SMKLEKSAHM PCLNVGKPNR PTYLPLEVCR LVPLQRYKRS
301: LSTSQRSKLV EASRQRPDQR MSKLYGELRA NNYDSEPMMK ECGISIVPDF TQVQGRVLEA PQLSAADGRQ LYTPNGRWNF NKNRFFRPID FKKTWPWGVV
401: DFSTRRDVEH LVEHPLQSGS EKGISMEKYS AVIQEIHKMK HQSPAKRVED MFRQVNIAFG GNNPEFLLCF LPEKNSDIYG PWKRECLAQR GIVTQCLVPP
501: PNVKDQYLTN VLLKINAKLG GLNSLLKKEI THAIPHVSRI PTIIFGMDVS HGSPGRDVPS VAAVVSSLEW PIISKYRASV CTLPPRQEMI KTLFKQDGDT
601: DHGLIKDSLV AFLGKNNKPK PEQIIIFRDG VSESQFDQVL NDELGQIMEA CKFFGDKHFG GNWFPKFTVI VAQKNHHTRF FLRNGVNNVP PGTVVDGVIC
701: HPRNYDFYMC AHAGIIGTTR PTHYHVLHDE IGFSTDDLQE LVHSLSYTYQ RSTTAISVVA PIYYAHLAAA HVAKFTKLDD GMSETSSQAE AAPVPELPFL
801: HPNVASSMFF C

Best Arabidopsis Sequence Match ( AT2G27040.1 )
(BLAST)

001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC

Arabidopsis Description

AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.