Factsheet for Bra020152.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09103	Canola	nucleus	99.56	99.56
Bra002361.1-P	Field mustard	nucleus	84.44	83.97
AT5G21150.1	Thale cress	nucleus	80.35	81.25
Bra002360.1-P	Field mustard	nucleus	78.81	76.77
Bra034318.1-P	Field mustard	nucleus	67.88	66.7
GSMUA_Achr9P05150_001	Banana	nucleus	66.67	66.01
Os01t0275600-01	Rice	nucleus	64.79	64.93
Zm00001d040429_P012	Maize	nucleus	64.57	64.93
Zm00001d008249_P012	Maize	nucleus	64.13	64.56
OQU86696	Sorghum	nucleus	64.02	64.44
Os04t0151800-02	Rice	nucleus	64.46	64.11
TraesCS3A01G188400.1	Wheat	nucleus	64.57	63.86
HORVU3Hr1G038830.1	Barley	nucleus	64.57	63.45
EES18816	Sorghum	nucleus	62.58	62.38
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	64.46	61.86
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	14.68	61.57
Zm00001d039214_P025	Maize	nucleus	61.92	60.71
TraesCS7D01G458800.1	Wheat	nucleus	31.13	60.52
TraesCS1D01G453600.1	Wheat	nucleus	60.93	59.87
TraesCS1A01G445500.1	Wheat	golgi, unclear	61.04	59.78
TraesCS1B01G480100.1	Wheat	nucleus	61.04	59.65
TraesCS7A01G533100.1	Wheat	cytosol	58.17	58.49
TraesCS3D01G191600.5	Wheat	nucleus	64.46	58.28
TraesCS7D01G520400.1	Wheat	nucleus	57.62	57.43
PGSC0003DMT400039204	Potato	cytosol	9.49	57.33
TraesCS7B01G450300.1	Wheat	nucleus	57.95	57.13
Bra022918.1-P	Field mustard	nucleus	53.53	55.94
TraesCS7A01G521000.1	Wheat	nucleus	49.23	54.99
TraesCS7B01G450200.2	Wheat	nucleus	55.85	54.64
TraesCS7B01G437900.1	Wheat	cytosol	48.57	54.52
EES00570	Sorghum	nucleus	53.31	53.79
TraesCS7B01G437700.1	Wheat	nucleus	51.66	53.24
Os01t0275200-00	Rice	golgi, peroxisome, plastid	27.04	52.46
TraesCS7B01G373400.1	Wheat	nucleus	43.16	49.75
TraesCS7D01G458900.1	Wheat	mitochondrion	9.38	46.7
Solyc03g111760.2.1	Tomato	mitochondrion	45.92	45.41
HORVU7Hr1G107770.1	Barley	nucleus	28.7	43.48
Bra002349.1-P	Field mustard	nucleus	69.76	37.15
Bra033698.1-P	Field mustard	plastid	34.66	32.24
Bra011993.1-P	Field mustard	plastid	34.33	32.19
Bra014136.1-P	Field mustard	nucleus	35.43	29.75
Bra032254.1-P	Field mustard	nucleus	35.87	29.25
Bra003999.1-P	Field mustard	nucleus	28.92	26.71
Bra040815.1-P	Field mustard	cytosol	26.49	23.79
Bra023172.1-P	Field mustard	nucleus	26.49	23.14

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	EnsemblPlantsGene:Bra020152	EnsemblPlants:Bra020152.1	EnsemblPlants:Bra020152.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M4DUF9	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488
PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF20	InterPro:Piwi	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0002543420
SEG:seg	:	:	:	:	:

Description

AT5G21150 (E=0.0) | PAZ domain-containing protein / piwi domain-containing protein

Coordinates

chrA02:+:5283965..5288590

Molecular Weight (calculated)

101337.0 Da

IEP (calculated)

9.585

GRAVY (calculated)

-0.383

Length

906 amino acids

Sequence
(BLAST)

001: MGSDEDKALP LPPPVLPPNL LPEVESIKKN TLLPMARRGT GSKGQRIPLL TNHFKVNFNN ANGQFFHYSV AITYEDGRPV EAKGIGRKIL DKVQQTYKTD
101: LGSKYFAYDG EKTLFTVGPL PSNKLDFSVV LEDAPSSRNN TGNGSPNESN DADRKRSKRP NQSKKFMVEI SYAAKIPMHA IAAALQGKET DSLQDAIRVL
201: DVILRQSAAR QGCLLVRQSF FHNDAQNFVP IGAGVVGVRG FHSSFRTTQG GLSLNIDTST TMVVQPGPVV DFLLANQNVK DPYSVDWNKA RRVLKNLRVK
301: VAPSNREYKI SGLSENRCKE QMFSRNSKND MGEVVEHQTT VFEYFTEFRN IQLQYSGDFP CINVGKPKRP TYIPIEHCEL VSLQRYTKSL TNLQRASLVE
401: KSRQKPLERM TSLTTGLKNS NYNADLVLQE SGVSIGSSFT HVEGRILQAP KLRVGNGEDF QPRNGRWNFN NKKLVEPTTV TRWAVVNFSA RCDTNRLIPD
501: LIRCGNMKGI NVEPPYEVVF QENAQFRSAP PHIRVEKMFE QIQSKLPGKP KFLLCILAER KNSNVYGPWK KKNLAELGIV TQCIAPTARI NDQYLTNVLL
601: KINAKLGGLN SLLTMERSQA MPSVTQVPTI IVGMDVSHGS PGQSDVPSVA AVVSSRQWPL ISKYRACVRT QSRKVEMIDN LFKLVPGKEE KMVDEGIFRE
701: LLVDFYSSSQ KRKPDHIIIF RDGVSESQFN QVLNIELDQM MQACKFLDEK LNPKFTVIIA QKNHHTKFFQ DKGPDNVPPG TIIDSKICHP RNNDFYLCAH
801: AGMIGTTRPT HYHVLYDEIN FTTDDLQELV HSLSYVYQRS TTAISVVAPI CYAHLAAAQM GTVMKFEDLS LSETSSSHGG ITTPGAVPVP PMPKLNPEVA
901: SSMFFC

Best Arabidopsis Sequence Match ( AT5G21150.1 )
(BLAST)

001: MDSDEPNGSG LPPPPPFVPA NLVPEVEPVK KNILLPMARP RGSGSKGQKI PLLTNHFGVK FNKPSGYFFH YSVAINYEDG RPVEAKGIGR KILDKVQETY
101: QSDLGAKYFA YDGEKTLFTV GALPSNKLDF SVVLEEIPSS RNHAGNDTND ADRKRSRRPN QTKKFMVEIS YAAKIPMQAI ASALQGKETE NLQDALRVLD
201: IILRQSAARQ GCLLVRQSFF HNDVKNFVPI GGGVSGCRGF HSSFRTTQGG LSLNIDTSTT MIVQPGPVVD FLLANQNKKD PYGMDWNKAR RVLKNLRVQI
301: TLSNREYKIS GLSEHSCKDQ LFTWRKPNDK GEFEEVEITV LNYYKERNIE VRYSGDFPCI NVGKPKRPTY FPIEFCNLVS LQRYTKSLTN FQRAALVEKS
401: RQKPPERMAS LTKGLKDSNY NADPVLQDSG VSIITNFTQV EGRILPTPML KVGKGENLSP IKGKWNFMRK TLAEPTTVTR WAVVNFSARC DTNTLIRDLI
501: KCGREKGINV EPPFKDVINE NPQFRNAPAT VRVENMFEQI KSKLPKPPLF LLCILAERKN SDVYGPWKKK NLVDLGIVTQ CIAPTRLNDQ YLTNVLLKIN
601: AKLGGLNSLL AMERSPAMPK VTQVPTIIVG MDVSHGSPGQ SDIPSIAAVV SSRQWPLISK YKACVRTQSR KMEMIDNLFK PVNGKDEGMF RELLLDFYYS
701: SENRKPEHII IFRDGVSESQ FNQVLNIELD QMMQACKFLD DTWHPKFTVI VAQKNHHTKF FQSRGPDNVP PGTIIDSQIC HPRNFDFYLC AHAGMIGTTR
801: PTHYHVLYDE IGFATDDLQE LVHSLSYVYQ RSTTAISVVA PVCYAHLAAA QMGTVMKYEE LSETSSSHGG ITTPGAVPVP PMPQLHNNVS TSMFFC

Arabidopsis Description

AGO9Protein argonaute 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84VQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.