CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020152.1-P	Field mustard	nucleus	99.56	99.56
CDX92405	Canola	nucleus	84.0	83.17
AT5G21150.1	Thale cress	nucleus	80.46	81.36
CDY72062	Canola	plastid	26.6	81.14
CDY59516	Canola	nucleus	79.36	79.36
CDX92406	Canola	nucleus	79.03	79.2
CDX92417	Canola	nucleus	52.87	74.38
CDY16595	Canola	nucleus	75.5	74.35
CDY16587	Canola	nucleus	71.96	73.92
CDY56413	Canola	nucleus	68.65	67.39
CDY04475	Canola	nucleus	68.54	67.28
CDY48192	Canola	nucleus	67.99	66.81
CDX77061	Canola	nucleus	67.88	66.7
GSMUA_Achr9P05150_001	Banana	nucleus	66.56	65.9
Os01t0275600-01	Rice	nucleus	64.68	64.82
Zm00001d040429_P012	Maize	nucleus	64.46	64.82
Zm00001d008249_P012	Maize	nucleus	64.02	64.44
OQU86696	Sorghum	nucleus	63.91	64.33
Os04t0151800-02	Rice	nucleus	64.35	64.0
TraesCS3A01G188400.1	Wheat	nucleus	64.46	63.76
HORVU3Hr1G038830.1	Barley	nucleus	64.46	63.34
EES18816	Sorghum	nucleus	62.47	62.27
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	64.35	61.76
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	15.89	61.02
Zm00001d039214_P025	Maize	nucleus	61.81	60.61
TraesCS7D01G458800.1	Wheat	nucleus	31.13	60.52
TraesCS1D01G453600.1	Wheat	nucleus	60.93	59.87
TraesCS1A01G445500.1	Wheat	golgi, unclear	61.04	59.78
TraesCS1B01G480100.1	Wheat	nucleus	61.04	59.65
TraesCS7A01G533100.1	Wheat	cytosol	58.17	58.49
TraesCS3D01G191600.5	Wheat	nucleus	64.35	58.18
PGSC0003DMT400039204	Potato	cytosol	9.6	58.0
TraesCS7D01G520400.1	Wheat	nucleus	57.62	57.43
TraesCS7B01G450300.1	Wheat	nucleus	57.84	57.02
CDX84712	Canola	nucleus	53.31	55.71
CDX79495	Canola	nucleus	52.87	55.25
TraesCS7A01G521000.1	Wheat	nucleus	49.34	55.12
TraesCS7B01G437900.1	Wheat	cytosol	48.68	54.65
TraesCS7B01G450200.2	Wheat	nucleus	55.63	54.43
EES00570	Sorghum	nucleus	53.2	53.67
TraesCS7B01G437700.1	Wheat	nucleus	51.77	53.36
Os01t0275200-00	Rice	golgi, peroxisome, plastid	27.04	52.46
TraesCS7B01G373400.1	Wheat	nucleus	43.16	49.75
TraesCS7D01G458900.1	Wheat	mitochondrion	9.38	46.7
Solyc03g111760.2.1	Tomato	mitochondrion	45.92	45.41
HORVU7Hr1G107770.1	Barley	nucleus	28.7	43.48
CDY62055	Canola	nucleus	26.93	42.36
CDY04517	Canola	plastid	34.22	32.39
CDX71410	Canola	nucleus	34.0	32.35
CDX94724	Canola	plastid	34.99	32.31
CDY22332	Canola	plastid	34.66	32.21
CDY04311	Canola	cytosol, nucleus, plastid	34.44	31.84
CDY41831	Canola	nucleus	35.1	30.46
CDY68174	Canola	nucleus	35.32	30.42
CDY23683	Canola	cytosol, nucleus, plastid	34.55	28.82
CDY51501	Canola	nucleus	26.82	27.03
CDY07349	Canola	nucleus	28.48	26.22
CDY70429	Canola	plastid	25.61	26.16
CDY28550	Canola	cytosol, plastid	27.92	25.92
CDY25885	Canola	cytosol	26.49	23.76
CDY02373	Canola	nucleus	26.05	23.07
CDY55876	Canola	cytosol	25.94	22.71

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	GO:A0A078FB79	UniProt:A0A078FB79
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N	EnsemblPlants:CDY09103	ProteinID:CDY09103	ProteinID:CDY09103.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSBRNA2T00001321001	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF20
InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI0004EE9ADE	SEG:seg	:	:	:

Description

BnaA02g05290DBnaA02g05290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB79]

Coordinates

chrLK031993:+:106971..112541

Molecular Weight (calculated)

101341.0 Da

IEP (calculated)

9.676

GRAVY (calculated)

-0.383

Length

906 amino acids

Sequence
(BLAST)

001: MGSDEDKALP LPPPVLPPNL LPEVESIKKN TLLPMARRGT GSKGQRIPLL TNHFKVNFNN ASGQFFHYSV AITYEDGRPV EAKGIGRKIL DKVQQTYKTD
101: LGSKYFAYDG EKTLFTVGPL PSNKLDFSVV LEDAPSSRNN TGNGSPNESN DADRKRSKRP NQSKKFMVEI SYAAKIPMHA IAAALQGKET DSLQDAIRVL
201: DVILRQSAAR QGCLLVRQSF FHNDAQNFVP IGAGVVGVRG FHSSFRTTQG GLSLNIDTST TMVVQPGPVV DFLLANQNVK DPYSVDWNKA RRVLKNLRVK
301: VAPSNREYKI SGLSENRCKE QMFSRNSKND MGEVVEHQTT VFEYFTEFRN IQLQYSGDFP CINVGKPKRP TYIPIEHCEL VSLQRYTKSL TNLQRASLVE
401: KSRQKPLERM TSLTTGLKNS NYNADLVLQE SGVSIGSSFT HVEGRILKAP KLRVGNGEDF QPRNGRWNFN NKKLVEPTTV TRWAVVNFSA RCDTNRLIPD
501: LIRCGNMKGI NVEPPYEVVF QENAQFRSAP PHIRVEKMFE QIQSKLPGKP KFLLCILAER KNSNVYGPWK KKNLAELGIV TQCIAPTARI NDQYLTNVLL
601: KINAKLGGLN SLLTMERSQA MPSVTQVPTI IVGMDVSHGS PGQSDVPSVA AVVSSRQWPL ISKYRACVRT QSRKVEMIDN LFKLVPGKEE KMVDEGIFRS
701: LLVDFYSSSQ KRKPDHIIIF RDGVSESQFN QVLNIELDQM MQACKFLDEK WNPKFTVIIA QKNHHTKFFQ DKGPDNVPPG TIIDSKICHP RNNDFYLCAH
801: AGMIGTTRPT HYHVLYDEIN FTTDDLQELV HSLSYVYQRS TTAISVVAPI CYAHLAAAQM GTVMKFEDLS LSETSSSHGG ITTPGAVPVP PMPKLNPEVA
901: SSMFFC

Best Arabidopsis Sequence Match ( AT5G21150.1 )
(BLAST)

001: MDSDEPNGSG LPPPPPFVPA NLVPEVEPVK KNILLPMARP RGSGSKGQKI PLLTNHFGVK FNKPSGYFFH YSVAINYEDG RPVEAKGIGR KILDKVQETY
101: QSDLGAKYFA YDGEKTLFTV GALPSNKLDF SVVLEEIPSS RNHAGNDTND ADRKRSRRPN QTKKFMVEIS YAAKIPMQAI ASALQGKETE NLQDALRVLD
201: IILRQSAARQ GCLLVRQSFF HNDVKNFVPI GGGVSGCRGF HSSFRTTQGG LSLNIDTSTT MIVQPGPVVD FLLANQNKKD PYGMDWNKAR RVLKNLRVQI
301: TLSNREYKIS GLSEHSCKDQ LFTWRKPNDK GEFEEVEITV LNYYKERNIE VRYSGDFPCI NVGKPKRPTY FPIEFCNLVS LQRYTKSLTN FQRAALVEKS
401: RQKPPERMAS LTKGLKDSNY NADPVLQDSG VSIITNFTQV EGRILPTPML KVGKGENLSP IKGKWNFMRK TLAEPTTVTR WAVVNFSARC DTNTLIRDLI
501: KCGREKGINV EPPFKDVINE NPQFRNAPAT VRVENMFEQI KSKLPKPPLF LLCILAERKN SDVYGPWKKK NLVDLGIVTQ CIAPTRLNDQ YLTNVLLKIN
601: AKLGGLNSLL AMERSPAMPK VTQVPTIIVG MDVSHGSPGQ SDIPSIAAVV SSRQWPLISK YKACVRTQSR KMEMIDNLFK PVNGKDEGMF RELLLDFYYS
701: SENRKPEHII IFRDGVSESQ FNQVLNIELD QMMQACKFLD DTWHPKFTVI VAQKNHHTKF FQSRGPDNVP PGTIIDSQIC HPRNFDFYLC AHAGMIGTTR
801: PTHYHVLYDE IGFATDDLQE LVHSLSYVYQ RSTTAISVVA PVCYAHLAAA QMGTVMKYEE LSETSSSHGG ITTPGAVPVP PMPQLHNNVS TSMFFC

Arabidopsis Description

AGO9Protein argonaute 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84VQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.