Factsheet for Solyc03g111760.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039204	Potato	cytosol	15.94	97.33
CDY72062	Canola	plastid	16.48	50.84
GSMUA_Achr9P05150_001	Banana	nucleus	49.78	49.84
Solyc01g096750.1.1	Tomato	nucleus	47.16	49.04
Solyc01g008960.2.1	Tomato	nucleus	48.58	48.95
Os04t0151800-02	Rice	nucleus	48.58	48.85
Solyc06g073540.2.1	Tomato	nucleus	48.25	48.41
TraesCS7A01G533100.1	Wheat	cytosol	47.49	48.28
Os01t0275600-01	Rice	nucleus	47.49	48.12
Zm00001d040429_P012	Maize	nucleus	47.27	48.06
Zm00001d008249_P012	Maize	nucleus	46.94	47.78
OQU86696	Sorghum	nucleus	46.83	47.67
CDX92417	Canola	nucleus	33.41	47.52
EES18816	Sorghum	nucleus	46.83	47.19
Solyc06g073530.1.1	Tomato	nucleus	46.51	47.12
TraesCS3A01G188400.1	Wheat	nucleus	46.94	46.94
TraesCS1A01G445500.1	Wheat	golgi, unclear	47.27	46.81
TraesCS7D01G458800.1	Wheat	nucleus	23.8	46.78
TraesCS1D01G453600.1	Wheat	nucleus	47.05	46.75
Zm00001d039214_P025	Maize	nucleus	47.05	46.65
HORVU3Hr1G038830.1	Barley	nucleus	46.94	46.64
TraesCS1B01G480100.1	Wheat	nucleus	47.16	46.6
AT5G21150.1	Thale cress	nucleus	45.52	46.54
TraesCS7D01G520400.1	Wheat	nucleus	46.18	46.53
Bra020152.1-P	Field mustard	nucleus	45.41	45.92
CDY09103	Canola	nucleus	45.41	45.92
CDY16587	Canola	nucleus	43.89	45.58
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	46.83	45.44
TraesCS7B01G450300.1	Wheat	nucleus	45.31	45.16
AT5G21030.2	Thale cress	cytosol	42.03	45.08
CDY59516	Canola	nucleus	44.21	44.7
CDX92406	Canola	nucleus	44.1	44.69
Bra002361.1-P	Field mustard	nucleus	44.32	44.57
TraesCS7A01G521000.1	Wheat	nucleus	39.3	44.39
TraesCS7B01G450200.2	Wheat	nucleus	44.54	44.06
TraesCS7B01G437900.1	Wheat	cytosol	38.54	43.74
CDX92405	Canola	nucleus	43.67	43.72
EES00570	Sorghum	nucleus	42.58	43.43
TraesCS7B01G437700.1	Wheat	nucleus	41.48	43.23
Bra002360.1-P	Field mustard	nucleus	43.78	43.12
Solyc07g049500.2.1	Tomato	nucleus	42.36	42.97
TraesCS3D01G191600.5	Wheat	nucleus	46.83	42.81
Os01t0275200-00	Rice	golgi, peroxisome, plastid	21.62	42.4
TraesCS7B01G373400.1	Wheat	nucleus	33.73	39.31
CDY16595	Canola	nucleus	39.19	39.02
HORVU7Hr1G107770.1	Barley	nucleus	23.03	35.28
TraesCS7D01G458900.1	Wheat	mitochondrion	6.66	33.52
Solyc12g006790.1.1	Tomato	nucleus	29.59	29.05
Solyc09g082830.2.1	Tomato	nucleus	29.37	27.39
Solyc03g098280.2.1	Tomato	nucleus	29.26	27.35
Solyc06g072300.2.1	Tomato	nucleus	29.04	25.24
Solyc06g074730.2.1	Tomato	nucleus	27.84	25.22
Solyc01g010970.2.1	Tomato	nucleus	25.44	23.3
Solyc02g069270.2.1	Tomato	cytosol	24.67	23.13
Bra002349.1-P	Field mustard	nucleus	42.25	22.75
Solyc02g069260.2.1	Tomato	nucleus	24.56	21.59
Solyc02g069280.2.1	Tomato	nucleus	22.38	20.52

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397
UniProt:K4BK38	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF20
InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	EnsemblPlantsGene:Solyc03g111760.2	EnsemblPlants:Solyc03g111760.2.1	UniParc:UPI00027690EE	:	:

Description

No Description!

Coordinates

chr3:-:62394005..62399968

Molecular Weight (calculated)

104690.0 Da

IEP (calculated)

10.049

GRAVY (calculated)

-0.270

Length

916 amino acids

Sequence
(BLAST)

001: MRNIVWRLIT VLSLIKKQSM VSKELFPYLP NFNQMNRPRP GVKGKKIRLL TNYFRVCFQG GISQLYSYNV NILYENGDPV TGSNLIRKVI HKLWEIYSSE
101: LGEQVFASDG QQSLFTTSLL PQQKLDFTVV LDAATSKRWK TDGNLSGDGE LSEGDQKRQK IISRFKTFRI QINFVSIIPF KTMPDGKHGV KSRNNEVLIA
201: LDTILQHSNA KRCILHTDPQ KNSLLLRQSY FPNEMKNFMD LTGGILGCRG FHSSFQSVQG GLYFNLDTST TTLIQPGPLV NFLMANQNVE IPFKIDWTKA
301: KILKNLRIKL LHSNREHKIT GLSNRTCKEE KFLLRLRGSN NQNDNGQTVE ITVYEYFVRR CGIELGYSSN LPCINVGSQH KPQFIPVELC SLVPLQRFKK
401: ELSLHQRSLL VNNSSQKPIE LMKHLNEELK ANDYNTDPML RACGISINKS YTEVEGRVLF PPQLRVGNKE YLASRFSRWS FNGKKFADPK SIEFWAVVNF
501: STGHDIRAFC IEMAKLGAMR GMHIHPPSFV FEENAKHKKK PGSVRVNKMF EQIIPKFRKD PPRFLLCFLP AKFSNLYGPW KKKCLMTFGI RNQCIAKNKV
601: DETYLANVML KINAKVWDTN RFFTYMLITH KNSKSLVVLQ LGGLNSMLSA EVSQTIPLVS KVPTMILAMG LTHAPSSRSD LPSVAAVVGS RQWPMISYYR
701: ASTCIQPPKT ETIHSLFRPV SDREDTGMIR ELLMDFHASS GNRKPEQIII FRQGLGESQF NHIFSEMEEI IKACKFLDET WSPKFTLIVA QRRHHTKLFQ
801: PNSSDNIPPG TVVDTKICHP LYNNNFYICA HAARVGTSRP IHYFVLLDEI GFSSDTVQEL VHCLCYVSQR CTSAISEVAP IRYARLVSAQ MLEIMKTEGP
901: ELPMLHKNVR DTMFFC

Best Arabidopsis Sequence Match ( AT2G27040.1 )
(BLAST)

001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC

Arabidopsis Description

AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.