Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27040.1 | OQU84386 | AT2G40030.1 | 19410546 |
| AT2G27040.1 | OQU78267 | AT5G04290.1 | 19410546 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008249_P012 | Maize | nucleus | 95.33 | 95.33 |
| Zm00001d040429_P012 | Maize | nucleus | 94.44 | 94.34 |
| Os01t0275600-01 | Rice | nucleus | 83.56 | 83.19 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 82.89 | 81.44 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 82.78 | 80.8 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 83.22 | 79.34 |
| EES18816 | Sorghum | nucleus | 75.22 | 74.48 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 82.89 | 74.45 |
| PGSC0003DMT400070806 | Potato | nucleus | 24.11 | 74.32 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 72.67 | 71.48 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 72.44 | 71.41 |
| Solyc01g008960.2.1 | Tomato | nucleus | 71.78 | 71.07 |
| KRH14678 | Soybean | nucleus | 71.22 | 70.75 |
| PGSC0003DMT400058471 | Potato | nucleus | 71.33 | 70.63 |
| KRH73469 | Soybean | nucleus | 70.67 | 70.2 |
| PGSC0003DMT400069459 | Potato | nucleus | 70.11 | 69.11 |
| Solyc06g073540.2.1 | Tomato | nucleus | 70.11 | 69.11 |
| Solyc01g096750.1.1 | Tomato | nucleus | 67.22 | 68.67 |
| CDY72062 | Canola | plastid | 22.11 | 67.0 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 68.0 | 66.67 |
| KRG89867 | Soybean | nucleus | 69.22 | 65.79 |
| CDX77061 | Canola | nucleus | 66.89 | 65.29 |
| CDY48192 | Canola | nucleus | 66.89 | 65.29 |
| Bra034318.1-P | Field mustard | nucleus | 66.78 | 65.18 |
| CDY04475 | Canola | nucleus | 66.78 | 65.11 |
| CDY56413 | Canola | nucleus | 66.78 | 65.11 |
| AT2G27040.1 | Thale cress | nucleus | 66.67 | 64.94 |
| Solyc06g073530.1.1 | Tomato | nucleus | 65.0 | 64.71 |
| Bra020152.1-P | Field mustard | nucleus | 64.44 | 64.02 |
| CDY09103 | Canola | nucleus | 64.33 | 63.91 |
| AT5G21150.1 | Thale cress | nucleus | 63.11 | 63.39 |
| CDX92417 | Canola | nucleus | 44.44 | 62.11 |
| EES00570 | Sorghum | nucleus | 61.67 | 61.8 |
| Bra002361.1-P | Field mustard | nucleus | 62.0 | 61.25 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 59.78 | 60.79 |
| CDX92405 | Canola | nucleus | 61.22 | 60.22 |
| KXG23356 | Sorghum | nucleus | 58.89 | 60.16 |
| AT5G21030.2 | Thale cress | cytosol | 56.22 | 59.25 |
| CDX92406 | Canola | nucleus | 59.44 | 59.18 |
| CDY59516 | Canola | nucleus | 59.56 | 59.16 |
| CDY16587 | Canola | nucleus | 57.89 | 59.07 |
| PGSC0003DMT400039204 | Potato | cytosol | 9.67 | 58.0 |
| Bra002360.1-P | Field mustard | nucleus | 59.44 | 57.53 |
| KRH56276 | Soybean | cytosol | 50.33 | 54.51 |
| CDY16595 | Canola | nucleus | 54.67 | 53.48 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 47.67 | 46.83 |
| CDY62055 | Canola | nucleus | 28.56 | 44.62 |
| OQU91198 | Sorghum | nucleus | 30.56 | 37.01 |
| EER90726 | Sorghum | cytosol | 34.0 | 36.04 |
| OQU88608 | Sorghum | plastid | 32.89 | 33.6 |
| OQU91197 | Sorghum | plastid | 32.78 | 33.37 |
| KXG20286 | Sorghum | cytosol | 35.11 | 32.21 |
| Bra002349.1-P | Field mustard | nucleus | 56.78 | 30.04 |
| OQU82149 | Sorghum | nucleus | 35.44 | 29.62 |
| KXG20965 | Sorghum | nucleus | 34.44 | 29.58 |
| EES18841 | Sorghum | nucleus | 34.89 | 28.31 |
| EER91156 | Sorghum | nucleus | 29.11 | 28.02 |
| OQU86027 | Sorghum | plastid | 33.78 | 27.54 |
| EER97198 | Sorghum | nucleus | 31.89 | 27.49 |
| EER92100 | Sorghum | cytosol | 28.33 | 24.69 |
| KXG27113 | Sorghum | nucleus | 28.89 | 23.81 |
| EER93271 | Sorghum | cytosol | 22.33 | 19.86 |
| OQU89939 | Sorghum | endoplasmic reticulum, plasma membrane | 20.22 | 18.07 |
Protein Annotations
| MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A1B6Q2W1 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | ProteinID:KXG32254.1 | ProteinID:KXG32255.1 | EnsemblPlants:OQU86696 | ProteinID:OQU86696 | ProteinID:OQU86696.1 |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF56 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | EnsemblPlantsGene:SORBI_3003G129500 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI0002207130 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:12107926..12117384
Molecular Weight (calculated)
100678.0 Da
IEP (calculated)
9.259
GRAVY (calculated)
-0.394
Length
900 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHNGEADD LPPPPPLNAG VEPLKADETK VPLKHRTLVQ RNGFGRKGQQ IKLLTNHFKV SLMNAADYFY HYYVNLKYED DTPVDRKGSG RKVIEKLQQT
101: YAAELANKDF AYDGEKSLFT IGALPQVKNE FTVVVDDVST GKTPANGSPG NDSPPGSDRK RIRRPYNTKT YKVELSFAAR IPMSAISQAL RGQESEHTQE
201: AIRVIDIILR QHSAKQGCLL VRQSFFHNNP SNFVDLGGGV VGCRGFHSSF RATQSGLSLN IDVSTTMIVK PGPVIDFLLA NQKVNHPGMI DWAKAKRSLK
301: NLRIKTSPAN QEQKIVGLSD RPCCEQLFTL KHKNGNGDSE EITVYDYFVK NRGIELQYSG DLPCINVGKP KRPTYFPVEL CSLLPLQRYT KALSTLQRSS
401: LVEKSRQKPQ ERIGVLSDVL QRSNYDAEPM LKACGITIAR SFTEVDGRIL QPPKLKAGNG EDIFTRNGRW NFNNKRLIKG SSVEKWAVVN FSARCNVRDL
501: VRDLIKCGGM KGIMVEAPFD VFEENPSMRR SPAVRRVEDM FEQVKTKLPG APKFLLCVLA ERKNSDIYGP WKKKCLAEFG IVTQCVAPTR VNDQYLTNVL
601: LKINAKLGGM NSLLQIETSP AIPQVSKVPT IILGMDVSHG SPGHSDVPSI AAVVSSREWP LISKYRASVR TQSPKMEMID SLFKPRETED DGLIRECLID
701: FYTSSGKKKP DQVIIFRDGV SESQFNQVLN IELQQIIEAC KFLDEKWNPK FTLIIAQKNH HTKFFIPGKT ENVPAGTVVD NKVCHPRNFD FYMCSHAGMI
801: GTTRPTHYHI LHDEIGFNPD DLQELVHSLS YVYQRSTTAI SVVAPICYAH LAAAQVGQFI KFDEMSETSS SHGGHTSAGS VPVQELPRLH EKVRSSMFFC
101: YAAELANKDF AYDGEKSLFT IGALPQVKNE FTVVVDDVST GKTPANGSPG NDSPPGSDRK RIRRPYNTKT YKVELSFAAR IPMSAISQAL RGQESEHTQE
201: AIRVIDIILR QHSAKQGCLL VRQSFFHNNP SNFVDLGGGV VGCRGFHSSF RATQSGLSLN IDVSTTMIVK PGPVIDFLLA NQKVNHPGMI DWAKAKRSLK
301: NLRIKTSPAN QEQKIVGLSD RPCCEQLFTL KHKNGNGDSE EITVYDYFVK NRGIELQYSG DLPCINVGKP KRPTYFPVEL CSLLPLQRYT KALSTLQRSS
401: LVEKSRQKPQ ERIGVLSDVL QRSNYDAEPM LKACGITIAR SFTEVDGRIL QPPKLKAGNG EDIFTRNGRW NFNNKRLIKG SSVEKWAVVN FSARCNVRDL
501: VRDLIKCGGM KGIMVEAPFD VFEENPSMRR SPAVRRVEDM FEQVKTKLPG APKFLLCVLA ERKNSDIYGP WKKKCLAEFG IVTQCVAPTR VNDQYLTNVL
601: LKINAKLGGM NSLLQIETSP AIPQVSKVPT IILGMDVSHG SPGHSDVPSI AAVVSSREWP LISKYRASVR TQSPKMEMID SLFKPRETED DGLIRECLID
701: FYTSSGKKKP DQVIIFRDGV SESQFNQVLN IELQQIIEAC KFLDEKWNPK FTLIIAQKNH HTKFFIPGKT ENVPAGTVVD NKVCHPRNFD FYMCSHAGMI
801: GTTRPTHYHI LHDEIGFNPD DLQELVHSLS YVYQRSTTAI SVVAPICYAH LAAAQVGQFI KFDEMSETSS SHGGHTSAGS VPVQELPRLH EKVRSSMFFC
001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
Arabidopsis Description
AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.