CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35431	Soybean	cytosol	97.74	97.74
KRH69078	Soybean	cytosol	90.45	90.64
KRH31645	Soybean	nucleus	87.68	89.99
VIT_05s0020g04190.t01	Wine grape	nucleus	80.18	88.95
PGSC0003DMT400077569	Potato	nucleus, plastid	83.47	84.78
Solyc09g082830.2.1	Tomato	nucleus	85.01	84.32
Bra033698.1-P	Field mustard	plastid	84.29	84.29
CDY22332	Canola	plastid	84.29	84.21
CDX94724	Canola	plastid	84.5	83.89
AT5G43810.3	Thale cress	nucleus	83.98	82.79
KRG99173	Soybean	cytosol	13.04	81.41
KRH03770	Soybean	nucleus	68.07	73.42
KRH56656	Soybean	cytosol	68.28	73.24
KRH63036	Soybean	cytosol	67.66	72.5
KRH54842	Soybean	nucleus	66.74	71.51
KRH38925	Soybean	endoplasmic reticulum	71.87	66.16
KRH09472	Soybean	nucleus	71.36	66.0
KRH25139	Soybean	plastid	50.62	51.3
KRH30536	Soybean	plastid	46.61	51.01
KRH20672	Soybean	nucleus	32.65	34.83
KRH70802	Soybean	nucleus	36.45	34.43
KRG89867	Soybean	nucleus	33.47	34.42
KRH74941	Soybean	nucleus	36.34	34.4
KRH73469	Soybean	nucleus	31.62	34.0
KRH14678	Soybean	nucleus	31.52	33.89
KRH36727	Soybean	nucleus	14.48	31.13
KRG89432	Soybean	nucleus	30.08	30.33
KRH56276	Soybean	cytosol	25.36	29.72
KRH11732	Soybean	nucleus	30.39	28.54

Protein Annotations

EntrezGene:100816999	MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EMBL:ACUP02012681
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:GLYMA_20G151400	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0031047	UniProt:I1NGL2	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	ProteinID:KRG91383.1
EnsemblPlants:KRG91384	ProteinID:KRG91384	ProteinID:KRG91384.1	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF45	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000233DE0E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:39010951..39018916

Molecular Weight (calculated)

109522.0 Da

IEP (calculated)

9.474

GRAVY (calculated)

-0.446

Length

974 amino acids

Sequence
(BLAST)

001: MPVRQMKESS EQHLVIKPHL QNPMNQAKKT TKAAQNGKGP PPQENHNQTL PNSKNKGRRR GRGGRKSDQG DVMMRPSCRP CTAPLTSSAN GNAENGCISD
101: TGFPTSSKSL TFARRPGYGQ VGTKCIVKAN HFFAELPDKD LNQYDVTITP EVSSRTVNRS IIAELVRLYK ESDLGMRLPA YDGRKSLYTA GQLPFAWREF
201: KIKLVDEEDG VNGPKREREY RVVIKFVARA NLYHLGQFLA GKRADAPQEA LQILDIVLRE LSTKRYCPIG RSFFSPDIRT PQRLGEGLES WCGFYQSIRP
301: TQMGLSLNID MASAAFIEPL PVVEFVGQLL GKDVLSRPLS DADRIKIKKA LRGVKVEVTH RGSVRRKYRV SGLTSQPTRE LVFPVDENST MKSVVEYFQE
401: MYGFTIQYTH LPCLQVGNQK KANYLPMEAC KIVEGQRYTK RLNEKQITAL LKVTCQRPRD RENDILRTVQ HNAYDQDPYA KEFGIKISEK LASVEARILP
501: APWLKYHESG KEKNCLPQVG QWNMMNKKMI NGMTVSRWAC INFSRSVQDS VARTFCNELA QMCQVSGMEF NPEPVIPIYN AKPEQVEKAL KHVYHVAGSK
601: TKAKELELLL AILPDNNGSL YGDLKRICET DLGLISQCCL TKHVFKITKQ YLANVSLKIN VKMGGRNTVL LDAVSCRIPL VSDIPTIIFG ADVTHPENGE
701: DSSPSIAAVV ASQDWPEVTK YAGLVCAQAH RQELIQDLYK TWQDPVRGTV SGGMIRDLLV SFRKATGQKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC
801: ASLEPNYQPP VTFIVVQKRH HTRLFANNYR DRSSTDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGI QSLTNNLCYT
901: YARCTRSVSV VPPAYYAHLA AFRARFYMEP DMQDNGSAGD GNGYGAKATR AAGDYSVKPL PDLKENVKRV MFYC

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.