Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g082830.2.1 | Tomato | nucleus | 98.75 | 96.44 |
| VIT_05s0020g04190.t01 | Wine grape | nucleus | 78.31 | 85.54 |
| KRG91384 | Soybean | cytosol | 84.78 | 83.47 |
| KRH35431 | Soybean | cytosol | 84.25 | 82.96 |
| KRH69078 | Soybean | cytosol | 83.0 | 81.89 |
| Bra033698.1-P | Field mustard | plastid | 83.11 | 81.83 |
| CDY22332 | Canola | plastid | 83.11 | 81.74 |
| CDX94724 | Canola | plastid | 83.21 | 81.35 |
| KRH31645 | Soybean | nucleus | 80.29 | 81.14 |
| AT5G43810.3 | Thale cress | nucleus | 82.69 | 80.26 |
| PGSC0003DMT400053301 | Potato | nucleus | 67.36 | 70.22 |
| PGSC0003DMT400069313 | Potato | cytosol | 72.47 | 65.94 |
| PGSC0003DMT400079716 | Potato | nucleus | 71.22 | 60.6 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 53.08 | 49.66 |
| PGSC0003DMT400039204 | Potato | cytosol | 7.51 | 48.0 |
| PGSC0003DMT400070806 | Potato | nucleus | 13.97 | 45.89 |
| PGSC0003DMT400058471 | Potato | nucleus | 33.37 | 35.2 |
| PGSC0003DMT400069459 | Potato | nucleus | 32.95 | 34.61 |
| PGSC0003DMT400054667 | Potato | cytosol | 25.65 | 33.7 |
| PGSC0003DMT400062439 | Potato | nucleus | 34.93 | 33.43 |
| PGSC0003DMT400054669 | Potato | cytosol | 32.22 | 29.4 |
| PGSC0003DMT400054661 | Potato | nucleus | 27.11 | 26.53 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009653 | GO:GO:0009934 | GO:GO:0009987 | GO:GO:0010586 | GO:GO:0031047 |
| GO:GO:0035019 | GO:GO:0035198 | GO:GO:0051607 | GO:GO:1902183 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | UniProt:M1CYK3 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | EnsemblPlantsGene:PGSC0003DMG400030166 | PGSC:PGSC0003DMG400030166 |
| EnsemblPlants:PGSC0003DMT400077569 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF45 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI000294B835 | SEG:seg | : | : | : |
Description
Eukaryotic translation initiation factor 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400030166]
Coordinates
chr9:-:54566890..54573860
Molecular Weight (calculated)
107838.0 Da
IEP (calculated)
9.518
GRAVY (calculated)
-0.434
Length
959 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPVQKTPKT PQNGKGPPNQ EPQNNKIHNQ TSPPSRNRGR RRGRGGRKSD QGETFMRPSS RPCTAASKPV IAASVEATNV SGVENNGSSS GFPSSSKSLC
101: FAPRPGYGQL GTKCIVKANH FLADLPDKEL NQYDVTVIPE VSSRTVNRAI MAELVKLYKE SHLGMRLPAY DGRKSLYTAG ELPFKWKEFT IKLIDEDDVI
201: NGPKREREYK VVIKFVARAN LHHLSEFLAG KRADGPKEAL QILDIVLREL SIKRYCPVGR SFFSPDIRKP QPLGDGLEAW CGFYQSIRPT QMGLSLNIDM
301: ASAAFIEALP VMEFVAQLLG KDVSSRPLSD SDRVKIKKAL RGVKVEVTHR GNVRRKYRVS GLTTQPTREL VFPVDDNLTM KSVVEYFQEM YGFTIKNTHL
401: PCLQVGNQKK ANYLPMEACK IVEGQRYTKR LSEKQITSLL KVTCQRPRDR ENSILQTVQH NDYNEDPYAK EFGIKISEKQ ASVEARVLPA PWLKYHETGK
501: EKDCLPQVGQ WNMMNKKMIN GMTVNRWACI NFSRSVQESV ARGFCNELAQ MCQVSGMEFN PEPIIPIYMA RPDQVEKALK HVYHSCVNKL KGKELELLLV
601: ILPDNNGSLY GDIKRICETD LGLITQCCLT KHVFKISKQY LANVSLKINV KMGGRNTVLL DAISCRIPLV SDIPTIIFGA DVTHPENGED SSPSIAAVVA
701: SQDWPEVTKY AGLVCAQAHR QELIQDLYKT WHDPARGTVS GGMIRDLLIS FRKATGQKPQ RIIFYRDGVS EGQFYQVLLF ELDAIRKACA SLEPNYQPPV
801: TFIVVQKRHH TRLFANNHKD RSSIDRSGNI LPGTVVDTKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENNFTADGIQ SLTNNLCYTY ARCTRSVSVV
901: PPAYYAHLAA FRARFYMEPD MPENNSGSPH QGSSKAIRET GVRPLPALKE NVKRVMFYC
101: FAPRPGYGQL GTKCIVKANH FLADLPDKEL NQYDVTVIPE VSSRTVNRAI MAELVKLYKE SHLGMRLPAY DGRKSLYTAG ELPFKWKEFT IKLIDEDDVI
201: NGPKREREYK VVIKFVARAN LHHLSEFLAG KRADGPKEAL QILDIVLREL SIKRYCPVGR SFFSPDIRKP QPLGDGLEAW CGFYQSIRPT QMGLSLNIDM
301: ASAAFIEALP VMEFVAQLLG KDVSSRPLSD SDRVKIKKAL RGVKVEVTHR GNVRRKYRVS GLTTQPTREL VFPVDDNLTM KSVVEYFQEM YGFTIKNTHL
401: PCLQVGNQKK ANYLPMEACK IVEGQRYTKR LSEKQITSLL KVTCQRPRDR ENSILQTVQH NDYNEDPYAK EFGIKISEKQ ASVEARVLPA PWLKYHETGK
501: EKDCLPQVGQ WNMMNKKMIN GMTVNRWACI NFSRSVQESV ARGFCNELAQ MCQVSGMEFN PEPIIPIYMA RPDQVEKALK HVYHSCVNKL KGKELELLLV
601: ILPDNNGSLY GDIKRICETD LGLITQCCLT KHVFKISKQY LANVSLKINV KMGGRNTVLL DAISCRIPLV SDIPTIIFGA DVTHPENGED SSPSIAAVVA
701: SQDWPEVTKY AGLVCAQAHR QELIQDLYKT WHDPARGTVS GGMIRDLLIS FRKATGQKPQ RIIFYRDGVS EGQFYQVLLF ELDAIRKACA SLEPNYQPPV
801: TFIVVQKRHH TRLFANNHKD RSSIDRSGNI LPGTVVDTKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENNFTADGIQ SLTNNLCYTY ARCTRSVSVV
901: PPAYYAHLAA FRARFYMEPD MPENNSGSPH QGSSKAIRET GVRPLPALKE NVKRVMFYC
001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC
Arabidopsis Description
AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.