Factsheet for Bra023480.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002360.1-P
Bra002361.1-P
Bra002520.1-P
Bra003735.1-P
Bra008231.1-P
Bra009513.1-P
Bra015801.1-P
Bra018814.1-P
Bra020152.1-P
Bra021203.1-P
Bra022181.1-P
Bra031085.1-P
Bra034318.1-P
Bra036717.1-P
Bra040678.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14620.1	Bra018814.1-P	AT1G49590.1	23524848
AT5G14620.1	Bra003735.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra008231.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra015801.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra031085.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra036717.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra040678.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra034318.1-P	AT2G27040.1	24855943
AT5G14620.1	Bra021203.1-P	AT3G16830.1	24855943
AT5G14620.1	Bra022181.1-P	AT3G16830.1	24855943
AT5G14620.1	Bra002520.1-P	AT3G45980.1	24855943
AT5G14620.1	Bra009513.1-P	AT5G03740.1	24855943
AT5G14620.1	Bra002360.1-P	AT5G21150.1	24855943
AT5G14620.1	Bra002361.1-P	AT5G21150.1	24855943
AT5G14620.1	Bra020152.1-P	AT5G21150.1	24855943

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85589	Canola	nucleus	83.6	83.6
HORVU4Hr1G017920.1	Barley	cytosol	12.13	66.67
Os11t0109200-00	Rice	plastid	21.8	58.08
TraesCS6A01G124200.1	Wheat	peroxisome	26.07	54.21
TraesCSU01G224900.1	Wheat	peroxisome	44.49	52.8
Bra008749.1-P	Field mustard	nucleus	64.27	47.59
Zm00001d044187_P001	Maize	cytosol	25.84	46.94
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	45.84	44.84
TraesCS3D01G454900.1	Wheat	peroxisome	45.39	44.79
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	46.29	42.21
AT5G14620.1	Thale cress	nucleus	58.2	41.37
HORVU3Hr1G098970.1	Barley	nucleus	45.17	39.65
HORVU6Hr1G081790.1	Barley	nucleus	46.97	38.7
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	37.3	38.25
Bra023479.1-P	Field mustard	cytosol	28.54	38.14
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	44.72	37.34
KRH69576	Soybean	nucleus	44.49	36.87
EER95283	Sorghum	nucleus	46.97	36.28
TraesCS6A01G338800.1	Wheat	nucleus	47.87	35.21
Os03t0110800-01	Rice	nucleus	46.97	35.01
Zm00001d048516_P001	Maize	nucleus	47.42	34.99
TraesCS6D01G319500.2	Wheat	nucleus	47.19	34.71
TraesCS5A01G241800.1	Wheat	nucleus	48.09	34.63
TraesCSU01G140500.1	Wheat	nucleus	46.74	34.61
EES00541	Sorghum	nucleus	47.19	34.54
TraesCSU01G124200.1	Wheat	nucleus	46.29	34.16
TraesCS5D01G248300.1	Wheat	nucleus	47.42	34.14
TraesCS4A01G267400.1	Wheat	nucleus	32.81	34.11
TraesCS4B01G012300.2	Wheat	cytosol	24.27	33.96
OQU93413	Sorghum	nucleus	46.29	33.94
OQU87185	Sorghum	cytosol	17.98	33.9
GSMUA_Achr11P...	Banana	nucleus	34.83	33.62
TraesCSU01G140600.1	Wheat	nucleus	46.74	33.55
TraesCS5A01G553300.3	Wheat	nucleus	45.62	33.28
GSMUA_Achr8P33680_001	Banana	cytosol	37.53	32.81
HORVU4Hr1G089730.3	Barley	nucleus	26.29	32.77
TraesCS4D01G046800.1	Wheat	nucleus	43.6	32.28
TraesCS3A01G461500.1	Wheat	nucleus	46.07	31.93
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	40.22	30.97
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	40.22	30.76
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	39.33	29.71
Zm00001d027329_P002	Maize	nucleus	47.19	29.7
Os12t0108900-00	Rice	cytosol, nucleus	23.37	29.21
GSMUA_Achr3P23940_001	Banana	nucleus	39.1	28.95
Bra004388.1-P	Field mustard	cytosol	52.81	28.87
TraesCS3A01G067600.1	Wheat	nucleus	44.94	26.35
TraesCS6D01G114500.1	Wheat	mitochondrion	27.42	25.58
Bra031188.1-P	Field mustard	nucleus	22.7	17.66
Bra022208.1-P	Field mustard	plasma membrane, vacuole	28.76	14.29
HORVU7Hr1G000490.1	Barley	cytosol	0.9	12.5

Protein Annotations

KEGG:00270+2.1.1.37	MapMan:12.5.1.11	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra023480	EnsemblPlants:Bra023480.1	EnsemblPlants:Bra023480.1-P
InterPro:C5_MeTfrase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525
InterPro:IPR030380	UniProt:M4E3X7	PFAM:PF00145	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3
InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	UniParc:UPI00025435D1	SEG:seg	:

Description

AT5G14620 (E=4e-147) DRM2, DMT7 | DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2); N-methyltransferase

Coordinates

chrA02:-:3542153..3545822

Molecular Weight (calculated)

50589.0 Da

IEP (calculated)

6.158

GRAVY (calculated)

-0.414

Length

445 amino acids

Sequence
(BLAST)

001: MEENLHRVSR SPDVGTHNQN DSVAEDNRRR RHYNHHTHGV QAKDSADWNA VDDLDFEILN FHSSPSNADD DMDFEIVNFH SSPSSPSPVV TNDEPLRLPI
101: PMLGLGVPNE QLFVTQRSLP ELARGPPYFY YENVVLAPWE TISRHLYDVA PEFVDSSFIC AAARERGYVH NLPISNRYLI QPPPKHTIQE VLPLTKNWWP
201: TWDTRTKLNC IFTVNASSQL TNRIRSALEA SRGEPPEEIK RYVIEQCKKW NLIWVGQNKA VPLEVNEIET LMGFPIYHTR GGGGISRAER LKSLSNSFQV
301: DTLAYHLSVL KPLFPDGINV LSLFTGIGGG EMALHRLQIP MKTVVSVEFS QANKYILRDF WERTNQKGVL IEFEDVQDLT KDIIVELMKQ FGGFDIVIGG
401: SPCNNLAGGN RVTPNGLEGE QSLMFYEYCR VLNVVRQTAK EMRRS

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.