Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G098970.1 | Barley | nucleus | 61.68 | 78.11 |
| TraesCS3A01G461300.1 | Wheat | cytosol, nucleus, peroxisome | 61.06 | 73.55 |
| TraesCS3B01G504200.1 | Wheat | nucleus | 69.63 | 73.52 |
| TraesCS3A01G461200.1 | Wheat | cytosol, nucleus, peroxisome | 54.52 | 71.72 |
| TraesCS5A01G553300.3 | Wheat | nucleus | 63.4 | 66.72 |
| Os11t0109200-00 | Rice | plastid | 16.98 | 65.27 |
| TraesCS6A01G338800.1 | Wheat | nucleus | 60.9 | 64.63 |
| TraesCS5A01G241800.1 | Wheat | nucleus | 61.99 | 64.4 |
| TraesCS6A01G124200.1 | Wheat | peroxisome | 21.34 | 64.02 |
| PGSC0003DMT400040081 | Potato | mitochondrion | 20.41 | 63.59 |
| TraesCS6A01G163300.1 | Wheat | cytosol, nucleus, peroxisome | 53.74 | 59.69 |
| Zm00001d044187_P001 | Maize | cytosol | 21.96 | 57.55 |
| Os03t0110800-01 | Rice | nucleus | 51.71 | 55.61 |
| TraesCS4A01G267400.1 | Wheat | nucleus | 37.07 | 55.61 |
| EER95283 | Sorghum | nucleus | 49.53 | 55.21 |
| Zm00001d048516_P001 | Maize | nucleus | 50.16 | 53.4 |
| OQU93413 | Sorghum | nucleus | 50.16 | 53.05 |
| EES00541 | Sorghum | nucleus | 49.38 | 52.14 |
| OQU87185 | Sorghum | cytosol | 17.6 | 47.88 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 25.86 | 46.63 |
| Zm00001d027329_P002 | Maize | nucleus | 50.78 | 46.11 |
| Bra023480.1-P | Field mustard | cytosol | 31.93 | 46.07 |
| CDX69571 | Canola | nucleus | 39.88 | 46.04 |
| CDY40934 | Canola | nucleus | 31.0 | 45.96 |
| KRG93258 | Soybean | nucleus | 41.43 | 45.86 |
| CDX85589 | Canola | nucleus | 31.62 | 45.62 |
| CDY09872 | Canola | nucleus | 39.1 | 45.14 |
| KRH69576 | Soybean | nucleus | 37.69 | 45.07 |
| VIT_14s0066g01040.t01 | Wine grape | cytosol | 37.23 | 44.92 |
| CDX85590 | Canola | cytosol | 38.63 | 44.44 |
| KRH56579 | Soybean | nucleus | 40.81 | 44.41 |
| Solyc02g062740.2.1 | Tomato | nucleus | 41.12 | 43.78 |
| TraesCS3A01G067600.1 | Wheat | nucleus | 51.25 | 43.35 |
| CDX91035 | Canola | cytosol | 37.38 | 43.24 |
| Bra008749.1-P | Field mustard | nucleus | 40.34 | 43.09 |
| GSMUA_Achr8P33680_001 | Banana | cytosol | 33.8 | 42.63 |
| Solyc10g078190.1.1 | Tomato | nucleus | 39.72 | 41.87 |
| KRG93790 | Soybean | cytosol | 6.23 | 41.67 |
| PGSC0003DMT400018502 | Potato | nucleus | 39.25 | 41.38 |
| AT5G14620.1 | Thale cress | nucleus | 40.03 | 41.05 |
| PGSC0003DMT400004867 | Potato | nucleus | 38.16 | 40.36 |
| AT5G15380.1 | Thale cress | cytoskeleton, cytosol, nucleus | 39.1 | 40.22 |
| Solyc04g005250.2.1 | Tomato | nucleus | 37.38 | 39.54 |
| GSMUA_Achr11P... | Banana | nucleus | 28.19 | 39.26 |
| GSMUA_Achr3P23940_001 | Banana | nucleus | 35.83 | 38.27 |
| CDY40933 | Canola | cytosol | 37.85 | 38.21 |
| Bra023479.1-P | Field mustard | cytosol | 19.78 | 38.14 |
| Bra004388.1-P | Field mustard | cytosol | 37.07 | 29.24 |
| TraesCS4A01G495700.1 | Wheat | cytosol | 20.87 | 26.8 |
| CDX95928 | Canola | golgi | 38.16 | 26.06 |
| TraesCS7A01G002900.3 | Wheat | plastid | 22.59 | 23.27 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 22.74 | 20.39 |
Protein Annotations
| KEGG:00270+2.1.1.37 | Gene3D:1.10.8.10 | MapMan:12.5.1.11 | Gene3D:2.20.70.90 | Gene3D:3.40.50.150 | InterPro:C5_MeTfrase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 |
| InterPro:IPR001525 | InterPro:IPR015940 | InterPro:IPR030380 | PFAM:PF00145 | PFscan:PS50030 | PFscan:PS51680 |
| PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF46934 | SUPFAM:SSF53335 |
| EnsemblPlantsGene:TraesCS3A01G461500 | EnsemblPlants:TraesCS3A01G461500.1 | InterPro:UBA | InterPro:UBA-like_sf | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:+:697368583..697376181
Molecular Weight (calculated)
71458.1 Da
IEP (calculated)
5.551
GRAVY (calculated)
-0.485
Length
642 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIVFWLTRQ GFRNDSDGRD KGKSDVESEP SRAPDLRNLY APGPSTLVPQ RSDRDGRDKG ISDDDVEPSW ALDLWNFDAP SPSSLSSNGW ANGQGSSPSL
101: VKRYVAMGFP KEMVVTSIKE IGHSDENALL ELLLTYKAIG DEDTLGNVST SGCTLHRVED GDDLDFESSD GDDDAGDTEP NFGDYSDEDF LQEMSEKDEK
201: INSLVDMGFS EDEANMAIIR CVDGDLFVLV DSISASRVAG NLDLSNHQVT GRCFDSLEGE RKQRLVEERK KKRKRCGCTG QSNQPSLDCN HDEQMLLPNP
301: MVGFNLPNYS PSSVRVTRTI LEQDMGRPYF YYENVARALT GVWATISRSL YDIQPEFVDS KHLCAAARKR GYIHNLPIEN RAPLLPSPPM TIFEAFPRYK
401: KWWPSWDQRT QFNCLLTGVA GPTLTGKIGR ALASAGTPPS QSIQKYVIDQ CKRYNLVWVG KNKVARLEPQ EIEYLLGFPK DHTRGLGDTN RYKSLGNSFH
501: VDTVAYHLSV LKGMFPNGVN VLSLFTGIGG GEVALHRLGM NMRTVVSVEI DKASKRIFRD WWNQTQTGTL IEIDDVKSLT DDQVATYVTT FGGFDLVIGG
601: SPCNNLAGCN RSSRHGLEGK QSVLFHHYVR ILNVVKSAMA RK
101: VKRYVAMGFP KEMVVTSIKE IGHSDENALL ELLLTYKAIG DEDTLGNVST SGCTLHRVED GDDLDFESSD GDDDAGDTEP NFGDYSDEDF LQEMSEKDEK
201: INSLVDMGFS EDEANMAIIR CVDGDLFVLV DSISASRVAG NLDLSNHQVT GRCFDSLEGE RKQRLVEERK KKRKRCGCTG QSNQPSLDCN HDEQMLLPNP
301: MVGFNLPNYS PSSVRVTRTI LEQDMGRPYF YYENVARALT GVWATISRSL YDIQPEFVDS KHLCAAARKR GYIHNLPIEN RAPLLPSPPM TIFEAFPRYK
401: KWWPSWDQRT QFNCLLTGVA GPTLTGKIGR ALASAGTPPS QSIQKYVIDQ CKRYNLVWVG KNKVARLEPQ EIEYLLGFPK DHTRGLGDTN RYKSLGNSFH
501: VDTVAYHLSV LKGMFPNGVN VLSLFTGIGG GEVALHRLGM NMRTVVSVEI DKASKRIFRD WWNQTQTGTL IEIDDVKSLT DDQVATYVTT FGGFDLVIGG
601: SPCNNLAGCN RSSRHGLEGK QSVLFHHYVR ILNVVKSAMA RK
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.