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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G058200.1 Wheat nucleus 98.08 96.23
TraesCS5B01G064900.1 Wheat nucleus, unclear 97.44 95.6
TraesCS2A01G312400.1 Wheat nucleus 71.79 94.92
TraesCS1A01G190400.1 Wheat nucleus 84.62 94.29
TraesCS2D01G310800.1 Wheat nucleus 91.03 93.42
TraesCS1A01G228700.1 Wheat nucleus 90.38 92.76
GSMUA_Achr9P04060_001 Banana nucleus 69.23 92.31
TraesCS4A01G030500.1 Wheat nucleus 83.33 92.2
TraesCS3A01G075800.1 Wheat nucleus 56.41 91.67
Zm00001d007084_P001 Maize plastid 89.1 91.45
TraesCS3A01G088800.1 Wheat nucleus 88.46 91.39
TraesCS4A01G030400.1 Wheat nucleus 89.74 90.91
TraesCS4A01G260400.1 Wheat nucleus 88.46 90.79
TraesCS1A01G388600.1 Wheat nucleus 88.46 90.2
TraesCS6A01G040400.1 Wheat nucleus 80.13 89.93
Zm00001d051591_P001 Maize plastid 88.46 89.61
TraesCS3A01G102500.1 Wheat nucleus 82.69 89.58
TraesCS1A01G361600.1 Wheat nucleus 87.82 89.54
TraesCS1A01G367900.1 Wheat nucleus 87.82 89.54
TraesCS1A01G368000.1 Wheat nucleus 87.82 89.54
TraesCS6A01G040500.1 Wheat nucleus 77.56 88.97
TraesCS6A01G034500.1 Wheat nucleus 81.41 88.19
TraesCS6A01G035000.1 Wheat nucleus 81.41 88.19
TraesCS4A01G099900.1 Wheat nucleus 83.97 87.92
TraesCS5A01G384300.1 Wheat nucleus 85.26 87.5
TraesCS6A01G086400.1 Wheat nucleus 75.64 87.41
TraesCS7A01G490900.1 Wheat nucleus 76.92 86.96
TraesCS7A01G491000.1 Wheat nucleus 76.92 86.96
TraesCS3A01G357500.1 Wheat nucleus 75.64 86.76
TraesCS6A01G086200.1 Wheat nucleus 75.0 86.67
TraesCS7A01G491100.1 Wheat extracellular, nucleus, unclear 78.85 86.62
KRH26542 Soybean nucleus 74.36 86.57
TraesCS3A01G357400.1 Wheat nucleus 76.28 86.23
TraesCS6A01G040200.1 Wheat nucleus 76.28 86.23
KRH22818 Soybean nucleus 73.08 85.71
PGSC0003DMT400077939 Potato nucleus 78.85 84.25
KRH19721 Soybean nucleus 75.0 84.17
AT2G37470.1 Thale cress nucleus 74.36 84.06
Bra007018.1-P Field mustard nucleus 74.36 84.06
PGSC0003DMT400043578 Potato nucleus 75.64 83.69
Solyc06g075800.1.1 Tomato nucleus 78.21 83.56
Bra039810.1-P Field mustard nucleus 73.72 83.33
KRG95819 Soybean nucleus 73.72 83.33
KRH67549 Soybean nucleus 73.72 83.33
GSMUA_Achr2P19080_001 Banana nucleus 76.28 83.22
Bra038267.1-P Field mustard nucleus 73.08 83.21
KRH34681 Soybean nucleus 73.08 83.21
Solyc03g071620.1.1 Tomato nucleus 75.0 82.98
VIT_13s0019g05370.t01 Wine grape nucleus 76.92 82.76
PGSC0003DMT400070382 Potato nucleus 76.28 82.64
KRG92106 Soybean nucleus 71.79 82.35
VIT_06s0004g04230.t01 Wine grape nucleus 76.92 82.19
AT3G46030.1 Thale cress nucleus 76.28 82.07
AT5G59910.1 Thale cress nucleus 78.85 82.0
Solyc11g007920.1.1 Tomato nucleus 75.64 81.94
Bra003150.1-P Field mustard nucleus 72.44 81.88
KRH29833 Soybean nucleus 75.0 81.82
KRH29831 Soybean nucleus 77.56 81.76
KRH29832 Soybean nucleus 77.56 81.76
KRH29836 Soybean nucleus 77.56 81.76
Bra006685.1-P Field mustard nucleus 73.72 81.56
Bra002520.1-P Field mustard nucleus 78.21 81.33
KRH24831 Soybean nucleus 77.56 81.21
KRH24833 Soybean nucleus 77.56 81.21
AT3G53650.1 Thale cress nucleus 71.79 81.16
AT5G02570.1 Thale cress nucleus 68.59 81.06
Bra020275.1-P Field mustard nucleus 73.72 80.99
PGSC0003DMT400070383 Potato nucleus 73.72 80.99
PGSC0003DMT400060096 Potato nucleus 76.28 80.95
PGSC0003DMT400074994 Potato nucleus 76.28 80.95
Solyc05g055440.1.1 Tomato nucleus 76.28 80.95
Solyc06g005390.1.1 Tomato nucleus 76.28 80.95
Bra002436.1-P Field mustard nucleus 73.08 80.85
AT2G28720.1 Thale cress nucleus 78.21 80.79
AT3G45980.1 Thale cress nucleus 77.56 80.67
KRH24830 Soybean nucleus 76.92 80.54
VIT_06s0004g04250.t01 Wine grape nucleus 76.28 80.41
Solyc06g074790.1.1 Tomato nucleus 73.08 80.28
Solyc11g066430.1.1 Tomato nucleus 71.79 80.0
Bra006639.1-P Field mustard nucleus 73.72 79.86
PGSC0003DMT400022074 Potato nucleus 73.72 79.86
PGSC0003DMT400022099 Potato nucleus 73.72 79.86
AT1G07790.1 Thale cress nucleus 75.64 79.73
Solyc11g007930.1.1 Tomato nucleus 70.51 79.71
VIT_06s0004g04300.t01 Wine grape nucleus 77.56 79.61
AT5G22880.1 Thale cress nucleus 73.72 79.31
Bra011930.1-P Field mustard nucleus 75.64 79.19
Bra035677.1-P Field mustard nucleus 75.64 79.19
Solyc06g074780.1.1 Tomato nucleus 72.44 79.02
PGSC0003DMT400018456 Potato nucleus 71.79 78.87
AT3G09480.1 Thale cress nucleus 63.46 78.57
Solyc12g013510.1.1 Tomato nucleus 69.87 78.42
Solyc02g038690.1.1 Tomato nucleus 67.31 78.36
PGSC0003DMT400018455 Potato nucleus 71.79 78.32
PGSC0003DMT400001108 Potato nucleus 71.15 78.17
HORVU1Hr1G058500.1 Barley nucleus 91.67 78.14
Bra000483.1-P Field mustard nucleus 76.92 77.42
GSMUA_Achr7P15260_001 Banana nucleus 75.0 76.97
PGSC0003DMT400074020 Potato nucleus 62.82 72.59
CDX71015 Canola nucleus 28.21 66.67
Solyc10g044580.1.1 Tomato nucleus 53.85 62.22
TraesCS4A01G311600.1 Wheat mitochondrion 33.33 58.43
VIT_06s0004g04240.t01 Wine grape nucleus 78.21 53.04
GSMUA_Achr6P33320_001 Banana nucleus 66.03 49.76
TraesCS6A01G061400.1 Wheat nucleus 60.9 45.45
PGSC0003DMT400074018 Potato nucleus 54.49 22.31
Protein Annotations
Gene3D:1.10.20.10MapMan:12.1.3GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0046982
InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2BInterPro:IPR009072PFAM:PF00125PRINTS:PR00621
ScanProsite:PS00357PANTHER:PTHR23428PANTHER:PTHR23428:SF175SMART:SM00427SUPFAM:SSF47113EnsemblPlantsGene:TraesCS5A01G051900
EnsemblPlants:TraesCS5A01G051900.1SEG:seg::::
Description
No Description!
Coordinates
chr5A:-:47127855..47128325
Molecular Weight (calculated)
16762.5 Da
IEP (calculated)
10.850
GRAVY (calculated)
-0.663
Length
156 amino acids
Sequence
(BLAST)
001: MAPKAEKKPA AKKPAEEEPA TEKAPAAKKP KAEKRLPAGK TASKEGAGGE AKTRGRKKGS KAKKGVETYK IYIFKVLKQV HPDVGISSKA MSIMNSFIND
101: IFEKLAAEAA KLARYNKKPT ITSREIQTSV RLVLPGELAK HAVSEGTKAV TKFTSS
Best Arabidopsis Sequence Match ( AT1G07790.1 )
(BLAST)
001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
Arabidopsis Description
HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.