Factsheet for Zm00001d051591_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007084_P001	Maize	plastid	94.81	96.05
TraesCS2A01G312400.1	Wheat	nucleus	73.38	95.76
Zm00001d050100_P001	Maize	plastid	92.86	95.33
Zm00001d011236_P001	Maize	plastid	92.21	94.67
Zm00001d039821_P001	Maize	plastid	91.56	94.63
Zm00001d005789_P001	Maize	plastid	92.86	94.08
Zm00001d012423_P001	Maize	plastid	83.12	93.43
Zm00001d020580_P001	Maize	plastid	91.56	93.38
Zm00001d025913_P001	Maize	plastid	90.91	93.33
GSMUA_Achr9P04060_001	Banana	nucleus	70.78	93.16
TraesCS4A01G030500.1	Wheat	nucleus	85.06	92.91
TraesCS1A01G190400.1	Wheat	nucleus	84.42	92.86
TraesCS4B01G275400.1	Wheat	nucleus	92.86	92.86
TraesCS1B01G192500.1	Wheat	nucleus	92.21	92.81
TraesCS1B01G244900.1	Wheat	nucleus	91.56	92.76
TraesCS1B01G245300.1	Wheat	nucleus	91.56	92.76
TraesCS2D01G310800.1	Wheat	nucleus	91.56	92.76
Zm00001d042930_P001	Maize	plastid	82.47	92.7
Zm00001d032070_P001	Maize	plastid	90.26	92.67
TraesCSU01G169300.1	Wheat	nucleus	88.96	92.57
TraesCSU01G169400.1	Wheat	nucleus	88.96	92.57
TraesCSU01G169500.1	Wheat	nucleus	88.96	92.57
TraesCSU01G169700.1	Wheat	nucleus	88.96	92.57
TraesCSU01G169800.1	Wheat	nucleus	88.96	92.57
TraesCSU01G169900.1	Wheat	nucleus	88.96	92.57
TraesCSU01G170400.1	Wheat	nucleus	88.96	92.57
TraesCSU01G170500.1	Wheat	nucleus	88.96	92.57
TraesCSU01G170600.1	Wheat	nucleus	88.96	92.57
TraesCSU01G170700.1	Wheat	nucleus	88.96	92.57
TraesCSU01G170900.1	Wheat	nucleus	88.96	92.57
TraesCSU01G171000.1	Wheat	nucleus	88.96	92.57
TraesCSU01G171100.1	Wheat	nucleus	88.96	92.57
TraesCS4A01G030400.1	Wheat	nucleus	92.21	92.21
HORVU1Hr1G049920.1	Barley	nucleus	91.56	92.16
TraesCS1A01G228700.1	Wheat	nucleus	90.91	92.11
TraesCS1D01G233300.1	Wheat	nucleus	90.91	92.11
Zm00001d044247_P001	Maize	plastid	88.31	91.89
EES07386	Sorghum	nucleus	92.21	91.61
TraesCS1D01G194600.1	Wheat	nucleus	90.26	90.85
TraesCS5B01G058200.1	Wheat	nucleus	93.51	90.57
TraesCS5B01G064900.1	Wheat	nucleus, unclear	93.51	90.57
TraesCS5A01G051900.1	Wheat	nucleus	89.61	88.46
TraesCS1B01G416600.1	Wheat	nucleus	86.36	88.08
TraesCS1A01G388600.1	Wheat	nucleus	86.36	86.93
TraesCS6B01G048500.1	Wheat	unclear	81.82	86.9
TraesCS1B01G357600.1	Wheat	nucleus	81.17	86.81
TraesCS1D01G396600.1	Wheat	golgi, nucleus, unclear	84.42	86.67
TraesCS1A01G361600.1	Wheat	nucleus	85.71	86.27
TraesCS1A01G367900.1	Wheat	nucleus	85.71	86.27
TraesCS1A01G368000.1	Wheat	nucleus	85.71	86.27
TraesCS1B01G386200.1	Wheat	nucleus	85.71	86.27
TraesCS1B01G386400.1	Wheat	nucleus	85.71	86.27
TraesCS1B01G386700.1	Wheat	nucleus	85.71	86.27
TraesCS1D01G366300.1	Wheat	nucleus	85.71	86.27
TraesCS1D01G373800.1	Wheat	nucleus	85.71	86.27
TraesCS1D01G373900.1	Wheat	nucleus	85.71	86.27
Bra007018.1-P	Field mustard	nucleus	77.27	86.23
TraesCS6B01G376900.1	Wheat	nucleus	85.06	86.18
TraesCS3A01G102500.1	Wheat	nucleus	80.52	86.11
TraesCS6A01G034500.1	Wheat	nucleus	80.52	86.11
TraesCS6A01G035000.1	Wheat	nucleus	80.52	86.11
TraesCS6B01G048800.1	Wheat	nucleus	80.52	86.11
TraesCS6B01G049100.1	Wheat	nucleus	80.52	86.11
TraesCS6B01G049300.1	Wheat	nucleus	80.52	86.11
KRH26542	Soybean	nucleus	74.68	85.82
KRH22818	Soybean	nucleus	74.03	85.71
TraesCS1B01G378300.1	Wheat	nucleus	85.06	85.62
TraesCS1B01G386500.1	Wheat	nucleus	85.06	85.62
TraesCS1B01G386600.1	Wheat	nucleus	85.06	85.62
Bra039810.1-P	Field mustard	nucleus	76.62	85.51
TraesCS6B01G082600.1	Wheat	nucleus	79.87	85.42
PGSC0003DMT400077939	Potato	nucleus	80.52	84.93
Solyc06g075800.1.1	Tomato	nucleus	80.52	84.93
KRH19721	Soybean	nucleus	76.62	84.89
AT3G46030.1	Thale cress	nucleus	79.87	84.83
TraesCS6D01G040200.1	Wheat	nucleus	79.87	84.83
TraesCS6D01G040600.1	Wheat	nucleus	79.87	84.83
Bra038267.1-P	Field mustard	nucleus	75.32	84.67
TraesCS6D01G326800.1	Wheat	nucleus, unclear	84.42	84.42
PGSC0003DMT400043578	Potato	nucleus	77.27	84.4
Solyc03g071620.1.1	Tomato	nucleus	77.27	84.4
VIT_06s0004g04230.t01	Wine grape	nucleus	79.87	84.25
AT2G37470.1	Thale cress	nucleus	75.32	84.06
KRG95819	Soybean	nucleus	75.32	84.06
KRH67549	Soybean	nucleus	75.32	84.06
AT5G59910.1	Thale cress	nucleus	81.82	84.0
GSMUA_Achr2P19080_001	Banana	nucleus	77.92	83.92
Bra020275.1-P	Field mustard	nucleus	77.27	83.8
VIT_06s0004g04250.t01	Wine grape	nucleus	80.52	83.78
TraesCSU01G081100.1	Wheat	nucleus	83.77	83.77
Bra006685.1-P	Field mustard	nucleus	76.62	83.69
VIT_13s0019g05370.t01	Wine grape	nucleus	78.57	83.45
Bra002520.1-P	Field mustard	nucleus	81.17	83.33
PGSC0003DMT400070382	Potato	nucleus	77.92	83.33
KRH34681	Soybean	nucleus	74.03	83.21
PGSC0003DMT400070383	Potato	nucleus	76.62	83.1
KRG92106	Soybean	nucleus	73.38	83.09
AT3G45980.1	Thale cress	nucleus	80.52	82.67
Bra003150.1-P	Field mustard	nucleus	74.03	82.61
KRH29833	Soybean	nucleus	76.62	82.52
Solyc11g066430.1.1	Tomato	nucleus	74.68	82.14
AT2G28720.1	Thale cress	nucleus	80.52	82.12
Solyc11g007920.1.1	Tomato	nucleus	76.62	81.94
AT3G53650.1	Thale cress	nucleus	73.38	81.88
Solyc11g007930.1.1	Tomato	nucleus	73.38	81.88
Bra011930.1-P	Field mustard	nucleus	79.22	81.88
Bra035677.1-P	Field mustard	nucleus	79.22	81.88
AT5G02570.1	Thale cress	nucleus	70.13	81.82
KRH29831	Soybean	nucleus	78.57	81.76
KRH29832	Soybean	nucleus	78.57	81.76
KRH29836	Soybean	nucleus	78.57	81.76
Solyc06g074790.1.1	Tomato	nucleus	75.32	81.69
PGSC0003DMT400074994	Potato	nucleus	77.92	81.63
Solyc06g005390.1.1	Tomato	nucleus	77.92	81.63
Bra002436.1-P	Field mustard	nucleus	74.68	81.56
PGSC0003DMT400022099	Potato	nucleus	75.97	81.25
KRH24831	Soybean	nucleus	78.57	81.21
KRH24833	Soybean	nucleus	78.57	81.21
AT1G07790.1	Thale cress	nucleus	77.92	81.08
AT3G09480.1	Thale cress	nucleus	66.23	80.95
PGSC0003DMT400060096	Potato	nucleus	77.27	80.95
AT5G22880.1	Thale cress	nucleus	75.97	80.69
Solyc02g038690.1.1	Tomato	nucleus	70.13	80.6
Solyc12g013510.1.1	Tomato	nucleus	72.73	80.58
PGSC0003DMT400022074	Potato	nucleus	75.32	80.56
KRH24830	Soybean	nucleus	77.92	80.54
PGSC0003DMT400001108	Potato	nucleus	74.03	80.28
PGSC0003DMT400018456	Potato	nucleus	74.03	80.28
Solyc05g055440.1.1	Tomato	nucleus	76.62	80.27
VIT_06s0004g04300.t01	Wine grape	nucleus	79.22	80.26
Bra006639.1-P	Field mustard	nucleus	74.68	79.86
PGSC0003DMT400018455	Potato	nucleus	74.03	79.72
Solyc06g074780.1.1	Tomato	nucleus	74.03	79.72
Bra000483.1-P	Field mustard	nucleus	79.87	79.35
HORVU4Hr1G073130.1	Barley	nucleus, plastid	92.86	78.14
HORVU1Hr1G058500.1	Barley	nucleus	92.21	77.6
HORVU2Hr1G077630.1	Barley	nucleus	90.91	77.35
GSMUA_Achr7P15260_001	Banana	nucleus	75.97	76.97
HORVU1Hr1G078480.6	Barley	nucleus	86.36	73.89
HORVU1Hr1G078530.3	Barley	nucleus	86.36	73.89
PGSC0003DMT400074020	Potato	nucleus	64.29	73.33
HORVU1Hr1G085540.1	Barley	nucleus	84.42	72.63
HORVU1Hr1G056530.1	Barley	nucleus, plastid	91.56	66.82
CDX71015	Canola	nucleus	28.57	66.67
HORVU3Hr1G015810.1	Barley	nucleus, plastid	90.26	66.51
Solyc10g044580.1.1	Tomato	nucleus	55.84	63.7
Zm00001d048491_P001	Maize	plastid	92.86	60.08
HORVU1Hr1G066130.1	Barley	nucleus	90.26	57.2
VIT_06s0004g04240.t01	Wine grape	nucleus	80.52	53.91
GSMUA_Achr6P33320_001	Banana	nucleus	68.18	50.72
Zm00001d005322_P001	Maize	nucleus	40.91	24.05
PGSC0003DMT400074018	Potato	nucleus	56.49	22.83

Protein Annotations

Gene3D:1.10.20.10	MapMan:12.1.3	EntrezGene:542301	ProteinID:AQK54610.1	UniProt:B4FE18	EMBL:BT035356
GO:GO:0000786	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0046982
InterPro:Histone-fold	InterPro:Histone_H2A/H2B/H3	InterPro:Histone_H2B	InterPro:IPR009072	UniProt:P54348	PFAM:PF00125
PRINTS:PR00621	ScanProsite:PS00357	PANTHER:PTHR23428	PANTHER:PTHR23428:SF60	SMART:SM00427	SUPFAM:SSF47113
EMBL:U08226	UniParc:UPI000012BFAA	EnsemblPlantsGene:Zm00001d051591	EnsemblPlants:Zm00001d051591_P001	EnsemblPlants:Zm00001d051591_T001	SEG:seg

Description

histone 2B5 histone 2B5

Coordinates

chr4:+:163976517..163976981

Molecular Weight (calculated)

16618.3 Da

IEP (calculated)

10.768

GRAVY (calculated)

-0.662

Length

154 amino acids

Sequence
(BLAST)

001: MAPKAEKKPA AKKVAEEEPS EKAAPAEKAP AGKKPKAEKR LPAGKSAGKE GGDKKGRKKA KKSVETYKIY IFKVLKQVHP DIGISSKAMS IMNSFINDIF
101: EKLAAEAAKL ARYNKKPTIT SREIQTSVRL VLPGELAKHA VSEGTKAVTK FTSS

Best Arabidopsis Sequence Match ( AT1G07790.1 )
(BLAST)

001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS

Arabidopsis Description

HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.