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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P20900_001 Banana nucleus 41.89 93.94
TraesCS6D01G046500.1 Wheat nucleus 41.22 92.42
TraesCS6B01G055300.1 Wheat nucleus 59.46 91.67
TraesCS6B01G055500.1 Wheat nucleus 59.46 91.67
GSMUA_Achr9P04060_001 Banana nucleus 72.3 91.45
AT3G45980.1 Thale cress nucleus 92.57 91.33
AT3G46030.1 Thale cress nucleus 89.19 91.03
AT5G22880.1 Thale cress nucleus 89.19 91.03
GSMUA_Achr10P... Banana nucleus 40.54 90.91
TraesCS7B01G394800.1 Wheat nucleus 59.46 90.72
TraesCS3A01G075800.1 Wheat nucleus 58.78 90.62
AT5G59910.1 Thale cress nucleus 91.22 90.0
VIT_13s0019g05370.t01 Wine grape nucleus 87.16 88.97
KRH29833 Soybean nucleus 85.81 88.81
KRH29831 Soybean nucleus 88.51 88.51
KRH29832 Soybean nucleus 88.51 88.51
KRH29836 Soybean nucleus 88.51 88.51
KRH24831 Soybean nucleus 88.51 87.92
KRH24833 Soybean nucleus 88.51 87.92
AT3G53650.1 Thale cress nucleus 81.76 87.68
TraesCS7B01G394500.1 Wheat nucleus 56.76 87.5
KRH24830 Soybean nucleus 87.84 87.25
AT2G37470.1 Thale cress nucleus 81.08 86.96
TraesCS2A01G312400.1 Wheat nucleus 68.92 86.44
AT2G28720.1 Thale cress nucleus 87.84 86.09
TraesCS3A01G357500.1 Wheat nucleus 79.05 86.03
TraesCS3D01G351300.1 Wheat nucleus 79.05 86.03
TraesCS3D01G351400.1 Wheat nucleus 79.05 86.03
HORVU6Hr1G015790.1 Barley nucleus 78.38 85.93
Os05t0460475-00 Rice nucleus 61.49 85.85
AT5G02570.1 Thale cress nucleus 76.35 85.61
TraesCS3B01G390000.1 Wheat nucleus 78.38 85.29
TraesCS3B01G390100.1 Wheat nucleus 77.7 85.19
TraesCS6A01G086400.1 Wheat nucleus 77.7 85.19
TraesCS6B01G116000.1 Wheat nucleus 77.7 85.19
TraesCSU01G077200.1 Wheat nucleus 77.7 85.19
TraesCS3A01G357400.1 Wheat nucleus 79.05 84.78
GSMUA_Achr2P19080_001 Banana nucleus 81.76 84.62
TraesCS3D01G099000.1 Wheat nucleus 77.7 84.56
TraesCS3B01G114600.1 Wheat nucleus 77.03 84.44
TraesCS6A01G086200.1 Wheat nucleus 77.03 84.44
TraesCSU01G077400.1 Wheat nucleus 77.03 84.44
Os01t0839500-00 Rice nucleus 79.05 84.17
AT3G09480.1 Thale cress nucleus 71.62 84.13
EES03855 Sorghum nucleus 77.7 83.94
Zm00001d012423_P001 Maize plastid 77.7 83.94
TraesCS3D01G075900.1 Wheat nucleus 77.03 83.82
TraesCS6D01G046200.1 Wheat nucleus, unclear 77.03 83.82
TraesCS6D01G046600.1 Wheat nucleus 77.03 83.82
TraesCS1B01G294500.1 Wheat nucleus 83.78 83.78
TraesCS3B01G114400.1 Wheat nucleus 76.35 83.7
Zm00001d042930_P001 Maize plastid 77.03 83.21
TraesCS6A01G040500.1 Wheat nucleus 76.35 83.09
TraesCS7B01G405800.1 Wheat nucleus 77.7 82.73
TraesCS7A01G491100.1 Wheat extracellular, nucleus, unclear 79.05 82.39
TraesCS7B01G394900.1 Wheat nucleus 79.05 82.39
TraesCS7D01G477300.1 Wheat nucleus 79.05 82.39
TraesCS7A01G491000.1 Wheat nucleus 76.35 81.88
TraesCS7B01G394700.1 Wheat nucleus 76.35 81.88
EES00304 Sorghum nucleus 82.43 81.88
TraesCS4D01G205300.1 Wheat nucleus 78.38 81.69
TraesCS7D01G477400.1 Wheat nucleus 78.38 81.69
EES00399 Sorghum nucleus 82.43 81.33
EES00305 Sorghum nucleus 81.76 81.21
Zm00001d039821_P001 Maize plastid 81.76 81.21
HORVU0Hr1G006420.1 Barley nucleus 75.68 81.16
HORVU3Hr1G034060.1 Barley nucleus 75.68 81.16
TraesCS3D01G342400.1 Wheat nucleus 75.68 81.16
TraesCS7B01G394600.1 Wheat nucleus 75.68 81.16
OQU92807 Sorghum nucleus 81.08 81.08
TraesCSU01G169300.1 Wheat nucleus 81.08 81.08
TraesCSU01G169400.1 Wheat nucleus 81.08 81.08
TraesCSU01G169500.1 Wheat nucleus 81.08 81.08
TraesCSU01G169700.1 Wheat nucleus 81.08 81.08
TraesCSU01G169800.1 Wheat nucleus 81.08 81.08
TraesCSU01G169900.1 Wheat nucleus 81.08 81.08
TraesCSU01G170400.1 Wheat nucleus 81.08 81.08
TraesCSU01G170500.1 Wheat nucleus 81.08 81.08
TraesCSU01G170600.1 Wheat nucleus 81.08 81.08
TraesCSU01G170700.1 Wheat nucleus 81.08 81.08
TraesCSU01G170900.1 Wheat nucleus 81.08 81.08
TraesCSU01G171000.1 Wheat nucleus 81.08 81.08
TraesCSU01G171100.1 Wheat nucleus 81.08 81.08
EES18353 Sorghum nucleus 80.41 80.95
TraesCS5A01G384300.1 Wheat nucleus 83.11 80.92
TraesCS7A01G490900.1 Wheat nucleus 75.0 80.43
TraesCS7B01G394100.1 Wheat nucleus 75.0 80.43
TraesCS7B01G394400.1 Wheat nucleus 75.0 80.43
TraesCS2D01G310800.1 Wheat nucleus 82.43 80.26
TraesCS5B01G389100.1 Wheat nucleus 82.43 80.26
Zm00001d011236_P001 Maize plastid 81.08 80.0
TraesCS4A01G099900.1 Wheat nucleus 80.41 79.87
TraesCS7D01G485700.1 Wheat nucleus 75.0 79.86
Zm00001d044247_P001 Maize plastid 79.73 79.73
TraesCS6A01G040200.1 Wheat nucleus 74.32 79.71
TraesCS3D01G351500.1 Wheat nucleus 66.22 79.67
EES15460 Sorghum nucleus 81.76 79.61
Os03t0279000-00 Rice nucleus 81.76 79.61
TraesCS3D01G088900.1 Wheat nucleus 81.76 79.61
TraesCS4A01G260400.1 Wheat nucleus 81.76 79.61
TraesCS4D01G054200.1 Wheat nucleus 81.76 79.61
TraesCS4A01G030500.1 Wheat nucleus 75.68 79.43
HORVU7Hr1G110290.1 Barley nucleus 54.73 79.41
TraesCS1A01G190400.1 Wheat nucleus 75.0 79.29
TraesCS6D01G046400.1 Wheat nucleus 75.0 79.29
TraesCS4B01G204400.1 Wheat nucleus 79.73 79.19
TraesCS6A01G040400.1 Wheat nucleus 74.32 79.14
EER96770 Sorghum nucleus 81.76 79.08
Zm00001d007084_P001 Maize plastid 81.08 78.95
Zm00001d020580_P001 Maize plastid 80.41 78.81
TraesCS1B01G357600.1 Wheat nucleus 76.35 78.47
OQU87075 Sorghum nucleus 81.08 78.43
Os01t0153100-00 Rice nucleus 81.08 78.43
TraesCS1B01G244900.1 Wheat nucleus 80.41 78.29
TraesCS1B01G245300.1 Wheat nucleus 80.41 78.29
EES15092 Sorghum nucleus 79.73 78.15
TraesCS3A01G088800.1 Wheat nucleus 79.73 78.15
HORVU6Hr1G087190.1 Barley nucleus 79.05 78.0
TraesCS1D01G396600.1 Wheat golgi, nucleus, unclear 79.05 78.0
Zm00001d025913_P001 Maize plastid 79.05 78.0
Zm00001d050100_P001 Maize plastid 79.05 78.0
Zm00001d051591_P001 Maize plastid 81.08 77.92
HORVU1Hr1G049920.1 Barley nucleus 80.41 77.78
Os01t0149600-01 Rice nucleus 80.41 77.78
Os01t0152900-00 Rice nucleus 80.41 77.78
TraesCS1B01G192500.1 Wheat nucleus 80.41 77.78
TraesCS3A01G102500.1 Wheat nucleus 75.68 77.78
TraesCS6A01G034500.1 Wheat nucleus 75.68 77.78
TraesCS6A01G035000.1 Wheat nucleus 75.68 77.78
TraesCS6B01G049300.1 Wheat nucleus 75.68 77.78
TraesCS5D01G020000.1 Wheat nucleus 82.43 77.71
Os05t0574300-00 Rice nucleus 79.73 77.63
TraesCS1A01G228700.1 Wheat nucleus 79.73 77.63
TraesCS1D01G233300.1 Wheat nucleus 79.73 77.63
TraesCS4B01G054200.1 Wheat nucleus 79.73 77.63
Zm00001d005789_P001 Maize plastid 79.73 77.63
TraesCS1B01G416600.1 Wheat nucleus 79.05 77.48
EES07386 Sorghum nucleus 81.08 77.42
Zm00001d032070_P001 Maize plastid 78.38 77.33
TraesCS4B01G275400.1 Wheat nucleus 80.41 77.27
TraesCS6B01G048500.1 Wheat unclear 75.68 77.24
Os01t0152300-00 Rice nucleus 79.73 77.12
TraesCS6B01G048800.1 Wheat nucleus 75.0 77.08
TraesCS6B01G049100.1 Wheat nucleus 75.0 77.08
TraesCS6B01G082600.1 Wheat nucleus 75.0 77.08
EER97675 Sorghum nucleus 78.38 76.82
TraesCS4A01G030400.1 Wheat nucleus 79.73 76.62
TraesCS6D01G040600.1 Wheat nucleus 75.0 76.55
GSMUA_Achr7P15260_001 Banana nucleus 78.38 76.32
Os01t0153300-00 Rice nucleus 79.73 76.13
TraesCS3B01G390300.1 Wheat nucleus 68.92 76.12
TraesCS6D01G040200.1 Wheat nucleus 74.32 75.86
TraesCS1A01G367900.1 Wheat nucleus 78.38 75.82
TraesCS1A01G368000.1 Wheat nucleus 78.38 75.82
TraesCS1A01G388600.1 Wheat nucleus 78.38 75.82
TraesCS1B01G386200.1 Wheat nucleus 78.38 75.82
TraesCS1B01G386400.1 Wheat nucleus 78.38 75.82
TraesCS1B01G386700.1 Wheat nucleus 78.38 75.82
TraesCS1D01G366300.1 Wheat nucleus 78.38 75.82
TraesCS1D01G373800.1 Wheat nucleus 78.38 75.82
TraesCS1D01G373900.1 Wheat nucleus 78.38 75.82
TraesCS5A01G051900.1 Wheat nucleus 79.73 75.64
TraesCS5B01G058200.1 Wheat nucleus 81.08 75.47
TraesCS5B01G064900.1 Wheat nucleus, unclear 81.08 75.47
TraesCS1A01G361600.1 Wheat nucleus 77.7 75.16
TraesCS1B01G378300.1 Wheat nucleus 77.7 75.16
TraesCS1B01G386500.1 Wheat nucleus 77.7 75.16
TraesCS1B01G386600.1 Wheat nucleus 77.7 75.16
TraesCS1D01G194600.1 Wheat nucleus 77.7 75.16
TraesCS6B01G084900.1 Wheat nucleus 77.7 74.68
TraesCS6B01G376900.1 Wheat nucleus 76.35 74.34
HORVU6Hr1G005950.2 Barley nucleus 77.7 74.19
TraesCS1D01G232900.1 Wheat nucleus 78.38 73.89
HORVU7Hr1G110130.1 Barley nucleus 58.78 73.73
TraesCS6D01G326800.1 Wheat nucleus, unclear 76.35 73.38
TraesCSU01G081100.1 Wheat nucleus 75.68 72.73
HORVU6Hr1G008320.1 Barley nucleus 77.03 72.61
HORVU7Hr1G110330.2 Barley nucleus 57.43 71.43
HORVU6Hr1G015760.1 Barley nucleus, plastid 78.38 71.17
HORVU1Hr1G072190.4 Barley nucleus 83.78 70.45
TraesCS5D01G393900.1 Wheat nucleus 77.7 70.12
HORVU4Hr1G070240.1 Barley nucleus 78.38 69.88
HORVU1Hr1G091370.1 Barley nucleus 75.0 69.81
HORVU7Hr1G110190.1 Barley nucleus 62.16 69.7
HORVU3Hr1G013530.1 Barley nucleus 77.03 69.51
HORVU7Hr1G110170.1 Barley nucleus 75.68 68.71
HORVU4Hr1G009040.2 Barley nucleus 79.05 68.02
HORVU3Hr1G013680.1 Barley nucleus 77.7 67.65
HORVU6Hr1G006110.1 Barley nucleus, plastid 52.7 66.67
HORVU2Hr1G077630.1 Barley nucleus 81.08 66.3
HORVU1Hr1G058500.1 Barley nucleus 81.08 65.57
HORVU4Hr1G073130.1 Barley nucleus, plastid 80.41 65.03
HORVU7Hr1G110090.1 Barley nucleus, plastid 75.68 64.74
HORVU1Hr1G078480.6 Barley nucleus 78.38 64.44
HORVU1Hr1G078530.3 Barley nucleus 78.38 64.44
HORVU1Hr1G085540.1 Barley nucleus 77.7 64.25
HORVU6Hr1G083110.1 Barley nucleus 71.62 61.99
HORVU5Hr1G094500.1 Barley nucleus, plastid 81.76 57.08
HORVU3Hr1G015810.1 Barley nucleus, plastid 80.41 56.94
HORVU1Hr1G056530.1 Barley nucleus, plastid 80.41 56.4
Os08t0490900-00 Rice nucleus 80.41 56.13
HORVU3Hr1G086580.1 Barley nucleus, plastid 66.89 53.8
HORVU3Hr1G086610.2 Barley nucleus 72.97 51.43
GSMUA_Achr6P33320_001 Banana nucleus 70.95 50.72
Zm00001d048491_P001 Maize plastid 81.08 50.42
HORVU1Hr1G066130.1 Barley nucleus 81.76 49.79
TraesCS6B01G081700.1 Wheat nucleus 53.38 48.17
TraesCS6D01G063200.1 Wheat nucleus 55.41 41.41
TraesCS6A01G061400.1 Wheat nucleus 54.73 38.76
AT1G08170.1 Thale cress nucleus 44.59 27.16
Protein Annotations
Gene3D:1.10.20.10MapMan:12.1.3EntrezGene:28719403EntrezGene:823741EntrezGene:823746EntrezGene:832352
EntrezGene:836113EntrezGene:837293ProteinID:AAF75074.1ProteinID:AED93093.1ProteinID:AED97250.1ProteinID:AEE28184.1
ProteinID:AEE78097.1ProteinID:AEE78103.1ProteinID:AEE79123.1EMBL:AF332446EMBL:AK227670ArrayExpress:AT1G07790
EnsemblPlantsGene:AT1G07790RefSeq:AT1G07790TAIR:AT1G07790RefSeq:AT1G07790-TAIR-GEnsemblPlants:AT1G07790.1TAIR:AT1G07790.1
EMBL:AY057643EMBL:AY070760EMBL:AY084352EMBL:AY086049EMBL:AY087219EMBL:AY088636
EMBL:AY133638ProteinID:BAB08359.1ProteinID:BAB10609.1EMBL:BT006400EMBL:BT020297EMBL:BT025505
EMBL:BT025507EMBL:BT025512ProteinID:CAB67672.1ProteinID:CAB82822.1ProteinID:CAB88327.1GO:GO:0000786
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005694GO:GO:0005730GO:GO:0005737
GO:GO:0009506GO:GO:0009507GO:GO:0009534GO:GO:0009536GO:GO:0009570GO:GO:0009579
GO:GO:0046982Symbol:HTB1InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2BInterPro:IPR009072
RefSeq:NP_001319739.1RefSeq:NP_172258.1RefSeq:NP_190184.1RefSeq:NP_190189.1RefSeq:NP_197679.1RefSeq:NP_200799.1
ProteinID:OAO89990.1ProteinID:OAP02526.1ProteinID:OAP05637.1PFAM:PF00125PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00621ScanProsite:PS00357
PANTHER:PTHR23428PANTHER:PTHR23428:SF172UniProt:Q9LQQ4SMART:SM00427SUPFAM:SSF47113UniParc:UPI00000A4225
EMBL:Y07745EMBL:Y12576EMBL:Z18202SEG:seg::
Description
HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
Coordinates
chr1:+:2412938..2413790
Molecular Weight (calculated)
16403.1 Da
IEP (calculated)
10.794
GRAVY (calculated)
-0.810
Length
148 amino acids
Sequence
(BLAST)
001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.