Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P20900_001 | Banana | nucleus | 41.72 | 95.45 |
| GSMUA_Achr9P04060_001 | Banana | nucleus | 72.19 | 93.16 |
| CDY15776 | Canola | nucleus | 90.73 | 92.57 |
| GSMUA_Achr10P... | Banana | nucleus | 40.4 | 92.42 |
| CDY71843 | Canola | nucleus | 90.73 | 91.95 |
| Bra011930.1-P | Field mustard | nucleus | 90.07 | 91.28 |
| Bra035677.1-P | Field mustard | nucleus | 90.07 | 91.28 |
| TraesCS6D01G046500.1 | Wheat | nucleus | 39.74 | 90.91 |
| CDX95762 | Canola | nucleus | 90.73 | 90.73 |
| TraesCS6B01G055300.1 | Wheat | nucleus | 57.62 | 90.62 |
| TraesCS6B01G055500.1 | Wheat | nucleus | 57.62 | 90.62 |
| KRH29831 | Soybean | nucleus | 88.74 | 90.54 |
| KRH29832 | Soybean | nucleus | 88.74 | 90.54 |
| KRH29836 | Soybean | nucleus | 88.74 | 90.54 |
| KRH29833 | Soybean | nucleus | 85.43 | 90.21 |
| AT5G59910.1 | Thale cress | nucleus | 89.4 | 90.0 |
| KRH24831 | Soybean | nucleus | 88.74 | 89.93 |
| KRH24833 | Soybean | nucleus | 88.74 | 89.93 |
| TraesCS7B01G394800.1 | Wheat | nucleus | 57.62 | 89.69 |
| AT3G46030.1 | Thale cress | nucleus | 86.09 | 89.66 |
| TraesCS3A01G075800.1 | Wheat | nucleus | 56.95 | 89.58 |
| CDY72471 | Canola | nucleus | 90.73 | 89.54 |
| KRH24830 | Soybean | nucleus | 88.08 | 89.26 |
| AT2G37470.1 | Thale cress | nucleus | 81.46 | 89.13 |
| VIT_13s0019g05370.t01 | Wine grape | nucleus | 85.43 | 88.97 |
| CDX77199 | Canola | nucleus | 90.73 | 88.96 |
| AT5G02570.1 | Thale cress | nucleus | 77.48 | 88.64 |
| Bra000483.1-P | Field mustard | nucleus | 90.73 | 88.39 |
| CDX83300 | Canola | nucleus | 90.73 | 88.39 |
| TraesCS2A01G312400.1 | Wheat | nucleus | 68.87 | 88.14 |
| AT3G45980.1 | Thale cress | nucleus | 87.42 | 88.0 |
| AT1G07790.1 | Thale cress | nucleus | 86.09 | 87.84 |
| AT3G53650.1 | Thale cress | nucleus | 80.13 | 87.68 |
| AT5G22880.1 | Thale cress | nucleus | 83.44 | 86.9 |
| TraesCS3A01G357500.1 | Wheat | nucleus | 78.15 | 86.76 |
| TraesCS3D01G351300.1 | Wheat | nucleus | 78.15 | 86.76 |
| TraesCS3D01G351400.1 | Wheat | nucleus | 78.15 | 86.76 |
| TraesCS7B01G394500.1 | Wheat | nucleus | 54.97 | 86.46 |
| Os01t0839500-00 | Rice | nucleus | 79.47 | 86.33 |
| EES03855 | Sorghum | nucleus | 78.15 | 86.13 |
| Zm00001d012423_P001 | Maize | plastid | 78.15 | 86.13 |
| TraesCS3B01G390000.1 | Wheat | nucleus | 77.48 | 86.03 |
| TraesCS3B01G390100.1 | Wheat | nucleus | 76.82 | 85.93 |
| Os05t0460475-00 | Rice | nucleus | 60.26 | 85.85 |
| TraesCS1B01G294500.1 | Wheat | nucleus | 84.11 | 85.81 |
| AT3G09480.1 | Thale cress | nucleus | 71.52 | 85.71 |
| TraesCS3A01G357400.1 | Wheat | nucleus | 78.15 | 85.51 |
| Zm00001d042930_P001 | Maize | plastid | 77.48 | 85.4 |
| EES00304 | Sorghum | nucleus | 83.44 | 84.56 |
| TraesCS3D01G099000.1 | Wheat | nucleus | 76.16 | 84.56 |
| HORVU6Hr1G015790.1 | Barley | nucleus | 75.5 | 84.44 |
| TraesCS3B01G114600.1 | Wheat | nucleus | 75.5 | 84.44 |
| TraesCS6A01G086400.1 | Wheat | nucleus | 75.5 | 84.44 |
| TraesCS6B01G116000.1 | Wheat | nucleus | 75.5 | 84.44 |
| TraesCSU01G077200.1 | Wheat | nucleus | 75.5 | 84.44 |
| EES00399 | Sorghum | nucleus | 83.44 | 84.0 |
| GSMUA_Achr2P19080_001 | Banana | nucleus | 79.47 | 83.92 |
| EES00305 | Sorghum | nucleus | 82.78 | 83.89 |
| TraesCS6D01G046600.1 | Wheat | nucleus | 75.5 | 83.82 |
| OQU92807 | Sorghum | nucleus | 82.12 | 83.78 |
| TraesCS3B01G114400.1 | Wheat | nucleus | 74.83 | 83.7 |
| TraesCS6A01G086200.1 | Wheat | nucleus | 74.83 | 83.7 |
| TraesCSU01G077400.1 | Wheat | nucleus | 74.83 | 83.7 |
| EES15460 | Sorghum | nucleus | 84.11 | 83.55 |
| Zm00001d039821_P001 | Maize | plastid | 82.12 | 83.22 |
| TraesCS4D01G205300.1 | Wheat | nucleus | 78.15 | 83.1 |
| TraesCS3D01G075900.1 | Wheat | nucleus | 74.83 | 83.09 |
| TraesCS6A01G040500.1 | Wheat | nucleus | 74.83 | 83.09 |
| TraesCS6D01G046200.1 | Wheat | nucleus, unclear | 74.83 | 83.09 |
| TraesCS2D01G310800.1 | Wheat | nucleus | 83.44 | 82.89 |
| Zm00001d007084_P001 | Maize | plastid | 83.44 | 82.89 |
| Zm00001d011236_P001 | Maize | plastid | 82.12 | 82.67 |
| Zm00001d044247_P001 | Maize | plastid | 80.79 | 82.43 |
| EES18353 | Sorghum | nucleus | 80.13 | 82.31 |
| TraesCS3D01G088900.1 | Wheat | nucleus | 82.78 | 82.24 |
| TraesCS1A01G190400.1 | Wheat | nucleus | 76.16 | 82.14 |
| TraesCS3A01G088800.1 | Wheat | nucleus | 82.12 | 82.12 |
| Zm00001d050100_P001 | Maize | plastid | 81.46 | 82.0 |
| TraesCS3D01G342400.1 | Wheat | nucleus | 74.83 | 81.88 |
| TraesCS7A01G491000.1 | Wheat | nucleus | 74.83 | 81.88 |
| TraesCS7B01G394700.1 | Wheat | nucleus | 74.83 | 81.88 |
| TraesCSU01G169300.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G169400.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G169500.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G169700.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G169800.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G169900.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G170400.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G170500.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G170600.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G170700.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G170900.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G171000.1 | Wheat | nucleus | 80.13 | 81.76 |
| TraesCSU01G171100.1 | Wheat | nucleus | 80.13 | 81.76 |
| EER96770 | Sorghum | nucleus | 82.78 | 81.7 |
| Os01t0153100-00 | Rice | nucleus | 82.78 | 81.7 |
| TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 76.82 | 81.69 |
| TraesCS7B01G394900.1 | Wheat | nucleus | 76.82 | 81.69 |
| TraesCS7D01G477300.1 | Wheat | nucleus | 76.82 | 81.69 |
| TraesCS1A01G228700.1 | Wheat | nucleus | 82.12 | 81.58 |
| TraesCS1B01G244900.1 | Wheat | nucleus | 82.12 | 81.58 |
| TraesCS1B01G245300.1 | Wheat | nucleus | 82.12 | 81.58 |
| TraesCS4A01G260400.1 | Wheat | nucleus | 82.12 | 81.58 |
| TraesCS4D01G054200.1 | Wheat | nucleus | 82.12 | 81.58 |
| EES15092 | Sorghum | nucleus | 81.46 | 81.46 |
| HORVU6Hr1G087190.1 | Barley | nucleus | 80.79 | 81.33 |
| Zm00001d025913_P001 | Maize | plastid | 80.79 | 81.33 |
| Zm00001d032070_P001 | Maize | plastid | 80.79 | 81.33 |
| TraesCS7B01G405800.1 | Wheat | nucleus | 74.83 | 81.3 |
| TraesCS4A01G099900.1 | Wheat | nucleus | 80.13 | 81.21 |
| HORVU0Hr1G006420.1 | Barley | nucleus | 74.17 | 81.16 |
| HORVU3Hr1G034060.1 | Barley | nucleus | 74.17 | 81.16 |
| TraesCS7A01G490900.1 | Wheat | nucleus | 74.17 | 81.16 |
| TraesCS7B01G394600.1 | Wheat | nucleus | 74.17 | 81.16 |
| HORVU1Hr1G049920.1 | Barley | nucleus | 82.12 | 81.05 |
| TraesCS1B01G192500.1 | Wheat | nucleus | 82.12 | 81.05 |
| TraesCS7D01G477400.1 | Wheat | nucleus | 76.16 | 80.99 |
| Os05t0574300-00 | Rice | nucleus | 81.46 | 80.92 |
| TraesCS1D01G233300.1 | Wheat | nucleus | 81.46 | 80.92 |
| TraesCS4B01G054200.1 | Wheat | nucleus | 81.46 | 80.92 |
| TraesCS5A01G384300.1 | Wheat | nucleus | 81.46 | 80.92 |
| Zm00001d005789_P001 | Maize | plastid | 81.46 | 80.92 |
| TraesCS4A01G030500.1 | Wheat | nucleus | 75.5 | 80.85 |
| EER97675 | Sorghum | nucleus | 80.79 | 80.79 |
| TraesCS6D01G046400.1 | Wheat | nucleus | 74.83 | 80.71 |
| TraesCS6A01G040400.1 | Wheat | nucleus | 74.17 | 80.58 |
| TraesCS4B01G204400.1 | Wheat | nucleus | 79.47 | 80.54 |
| TraesCS4B01G275400.1 | Wheat | nucleus | 82.12 | 80.52 |
| Zm00001d051591_P001 | Maize | plastid | 82.12 | 80.52 |
| TraesCS3D01G351500.1 | Wheat | nucleus | 65.56 | 80.49 |
| TraesCS6A01G040200.1 | Wheat | nucleus | 73.51 | 80.43 |
| TraesCS7B01G394100.1 | Wheat | nucleus | 73.51 | 80.43 |
| TraesCS7B01G394400.1 | Wheat | nucleus | 73.51 | 80.43 |
| TraesCS5B01G389100.1 | Wheat | nucleus | 80.79 | 80.26 |
| Zm00001d020580_P001 | Maize | plastid | 80.13 | 80.13 |
| EES07386 | Sorghum | nucleus | 82.12 | 80.0 |
| TraesCS4A01G030400.1 | Wheat | nucleus | 81.46 | 79.87 |
| OQU87075 | Sorghum | nucleus | 80.79 | 79.74 |
| Os01t0149600-01 | Rice | nucleus | 80.79 | 79.74 |
| Os01t0152900-00 | Rice | nucleus | 80.79 | 79.74 |
| Os03t0279000-00 | Rice | nucleus | 80.13 | 79.61 |
| HORVU7Hr1G110290.1 | Barley | nucleus | 53.64 | 79.41 |
| Os01t0153300-00 | Rice | nucleus | 81.46 | 79.35 |
| TraesCS1D01G396600.1 | Wheat | golgi, nucleus, unclear | 78.81 | 79.33 |
| TraesCS5D01G020000.1 | Wheat | nucleus | 82.12 | 78.98 |
| TraesCS1B01G416600.1 | Wheat | nucleus | 78.81 | 78.81 |
| TraesCS5B01G058200.1 | Wheat | nucleus | 82.78 | 78.62 |
| TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 82.78 | 78.62 |
| TraesCS1B01G357600.1 | Wheat | nucleus | 74.83 | 78.47 |
| Os01t0152300-00 | Rice | nucleus | 79.47 | 78.43 |
| TraesCS1D01G194600.1 | Wheat | nucleus | 79.47 | 78.43 |
| TraesCS7D01G485700.1 | Wheat | nucleus | 72.19 | 78.42 |
| TraesCS5A01G051900.1 | Wheat | nucleus | 80.79 | 78.21 |
| TraesCS6B01G048500.1 | Wheat | unclear | 74.83 | 77.93 |
| TraesCS3A01G102500.1 | Wheat | nucleus | 74.17 | 77.78 |
| TraesCS6A01G034500.1 | Wheat | nucleus | 74.17 | 77.78 |
| TraesCS6A01G035000.1 | Wheat | nucleus | 74.17 | 77.78 |
| TraesCS6B01G048800.1 | Wheat | nucleus | 74.17 | 77.78 |
| TraesCS6B01G049100.1 | Wheat | nucleus | 74.17 | 77.78 |
| TraesCS6B01G049300.1 | Wheat | nucleus | 74.17 | 77.78 |
| GSMUA_Achr7P15260_001 | Banana | nucleus | 78.15 | 77.63 |
| TraesCS6B01G084900.1 | Wheat | nucleus | 78.81 | 77.27 |
| TraesCS1A01G388600.1 | Wheat | nucleus | 78.15 | 77.12 |
| TraesCS6B01G082600.1 | Wheat | nucleus | 73.51 | 77.08 |
| TraesCS3B01G390300.1 | Wheat | nucleus | 68.21 | 76.87 |
| TraesCS6D01G040600.1 | Wheat | nucleus | 73.51 | 76.55 |
| TraesCS1A01G361600.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS1A01G367900.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS1A01G368000.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS1B01G386200.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS1B01G386400.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS1B01G386700.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS1D01G366300.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS1D01G373800.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS1D01G373900.1 | Wheat | nucleus | 77.48 | 76.47 |
| TraesCS6B01G376900.1 | Wheat | nucleus | 76.82 | 76.32 |
| TraesCS6D01G040200.1 | Wheat | nucleus | 72.85 | 75.86 |
| TraesCS1B01G378300.1 | Wheat | nucleus | 76.82 | 75.82 |
| TraesCS1B01G386500.1 | Wheat | nucleus | 76.82 | 75.82 |
| TraesCS1B01G386600.1 | Wheat | nucleus | 76.82 | 75.82 |
| TraesCS1D01G232900.1 | Wheat | nucleus | 78.15 | 75.16 |
| TraesCS6D01G326800.1 | Wheat | nucleus, unclear | 76.16 | 74.68 |
| HORVU6Hr1G005950.2 | Barley | nucleus | 76.16 | 74.19 |
| TraesCSU01G081100.1 | Wheat | nucleus | 75.5 | 74.03 |
| HORVU7Hr1G110130.1 | Barley | nucleus | 57.62 | 73.73 |
| HORVU6Hr1G008320.1 | Barley | nucleus | 75.5 | 72.61 |
| HORVU1Hr1G072190.4 | Barley | nucleus | 84.11 | 72.16 |
| HORVU1Hr1G091370.1 | Barley | nucleus | 75.5 | 71.7 |
| HORVU7Hr1G110330.2 | Barley | nucleus | 56.29 | 71.43 |
| HORVU4Hr1G009040.2 | Barley | nucleus | 80.79 | 70.93 |
| TraesCS5D01G393900.1 | Wheat | nucleus | 76.16 | 70.12 |
| HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 75.5 | 69.94 |
| HORVU2Hr1G077630.1 | Barley | nucleus | 82.78 | 69.06 |
| HORVU7Hr1G110190.1 | Barley | nucleus | 60.26 | 68.94 |
| HORVU7Hr1G110170.1 | Barley | nucleus | 74.17 | 68.71 |
| HORVU4Hr1G070240.1 | Barley | nucleus | 75.5 | 68.67 |
| HORVU1Hr1G058500.1 | Barley | nucleus | 82.78 | 68.31 |
| HORVU3Hr1G013530.1 | Barley | nucleus | 74.17 | 68.29 |
| HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 82.12 | 67.76 |
| HORVU3Hr1G013680.1 | Barley | nucleus | 74.83 | 66.47 |
| HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 50.99 | 65.81 |
| HORVU1Hr1G078480.6 | Barley | nucleus | 78.15 | 65.56 |
| HORVU1Hr1G078530.3 | Barley | nucleus | 78.15 | 65.56 |
| HORVU1Hr1G085540.1 | Barley | nucleus | 76.82 | 64.8 |
| HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 74.17 | 64.74 |
| HORVU6Hr1G083110.1 | Barley | nucleus | 70.86 | 62.57 |
| HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 81.46 | 58.85 |
| HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 82.12 | 58.77 |
| HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 80.79 | 57.55 |
| Os08t0490900-00 | Rice | nucleus | 80.79 | 57.55 |
| HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 66.23 | 54.35 |
| Zm00001d048491_P001 | Maize | plastid | 83.44 | 52.94 |
| HORVU3Hr1G086610.2 | Barley | nucleus | 72.19 | 51.9 |
| HORVU1Hr1G066130.1 | Barley | nucleus | 83.44 | 51.85 |
| GSMUA_Achr6P33320_001 | Banana | nucleus | 70.2 | 51.21 |
| TraesCS6B01G081700.1 | Wheat | nucleus | 54.97 | 50.61 |
| TraesCS6D01G063200.1 | Wheat | nucleus | 56.95 | 43.43 |
| TraesCS6A01G061400.1 | Wheat | nucleus | 56.29 | 40.67 |
| AT1G08170.1 | Thale cress | nucleus | 45.7 | 28.4 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.3 | EntrezGene:817421 | UniProt:A0A178VZH7 | ProteinID:AAD24363.1 | ProteinID:AEC08163.1 |
| EMBL:AF325075 | ArrayExpress:AT2G28720 | EnsemblPlantsGene:AT2G28720 | RefSeq:AT2G28720 | TAIR:AT2G28720 | RefSeq:AT2G28720-TAIR-G |
| EnsemblPlants:AT2G28720.1 | TAIR:AT2G28720.1 | EMBL:AY057605 | EMBL:AY085391 | EMBL:AY124835 | GO:GO:0000786 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0046982 | InterPro:Histone-fold |
| InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 | RefSeq:NP_180440.1 | ProteinID:OAP11667.1 | PFAM:PF00125 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00621 | ScanProsite:PS00357 | PANTHER:PTHR23428 | PANTHER:PTHR23428:SF106 | UniProt:Q9SI96 | SMART:SM00427 |
| SUPFAM:SSF47113 | UniParc:UPI000009CF6E | SEG:seg | : | : | : |
Description
Histone H2B.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI96]
Coordinates
chr2:+:12326808..12327808
Molecular Weight (calculated)
16530.3 Da
IEP (calculated)
10.743
GRAVY (calculated)
-0.677
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKAGKKPA EKKPAEKAPA EEEKVAEKAP AEKKPKAGKK LPKEAVTGGV EKKKKRVKKS TETYKIYIFK VLKQVHPDIG ISSKAMGIMN SFINDIFEKL
101: AQEASKLARY NKKPTITSRE IQTAVRLVLP GELAKHAVSE GTKAVTKFTS S
101: AQEASKLARY NKKPTITSRE IQTAVRLVLP GELAKHAVSE GTKAVTKFTS S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.