Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU6Hr1G015790.1 | Barley | nucleus | 82.82 | 100.0 |
TraesCS6A01G086400.1 | Wheat | nucleus | 82.21 | 99.26 |
TraesCS6B01G116000.1 | Wheat | nucleus | 82.21 | 99.26 |
TraesCSU01G077200.1 | Wheat | nucleus | 82.21 | 99.26 |
TraesCS6A01G086200.1 | Wheat | nucleus | 81.6 | 98.52 |
HORVU0Hr1G006420.1 | Barley | nucleus | 77.91 | 92.03 |
HORVU3Hr1G034060.1 | Barley | nucleus | 77.91 | 92.03 |
HORVU6Hr1G005950.2 | Barley | nucleus | 84.05 | 88.39 |
Bra038267.1-P | Field mustard | nucleus | 73.01 | 86.86 |
GSMUA_Achr9P04060_001 | Banana | nucleus | 61.96 | 86.32 |
HORVU4Hr1G070240.1 | Barley | nucleus | 85.89 | 84.34 |
KRH26542 | Soybean | nucleus | 69.33 | 84.33 |
HORVU7Hr1G110290.1 | Barley | nucleus | 52.76 | 84.31 |
KRH22818 | Soybean | nucleus | 68.71 | 84.21 |
Bra007018.1-P | Field mustard | nucleus | 71.17 | 84.06 |
Bra039810.1-P | Field mustard | nucleus | 71.17 | 84.06 |
KRG95819 | Soybean | nucleus | 70.55 | 83.33 |
KRH67549 | Soybean | nucleus | 70.55 | 83.33 |
EES00304 | Sorghum | nucleus | 76.07 | 83.22 |
Zm00001d039821_P001 | Maize | plastid | 76.07 | 83.22 |
HORVU3Hr1G013530.1 | Barley | nucleus | 83.44 | 82.93 |
AT2G37470.1 | Thale cress | nucleus | 69.94 | 82.61 |
Bra003150.1-P | Field mustard | nucleus | 69.94 | 82.61 |
AT5G02570.1 | Thale cress | nucleus | 66.87 | 82.58 |
EES00305 | Sorghum | nucleus | 75.46 | 82.55 |
AT3G09480.1 | Thale cress | nucleus | 63.8 | 82.54 |
KRG92106 | Soybean | nucleus | 68.71 | 82.35 |
KRH19721 | Soybean | nucleus | 69.94 | 82.01 |
EES00399 | Sorghum | nucleus | 75.46 | 82.0 |
PGSC0003DMT400043578 | Potato | nucleus | 70.55 | 81.56 |
Solyc03g071620.1.1 | Tomato | nucleus | 70.55 | 81.56 |
AT3G46030.1 | Thale cress | nucleus | 72.39 | 81.38 |
HORVU6Hr1G087190.1 | Barley | nucleus | 74.85 | 81.33 |
HORVU3Hr1G013680.1 | Barley | nucleus | 84.66 | 81.18 |
KRH34681 | Soybean | nucleus | 68.1 | 81.02 |
PGSC0003DMT400070383 | Potato | nucleus | 70.55 | 80.99 |
Bra006685.1-P | Field mustard | nucleus | 69.94 | 80.85 |
Solyc11g066430.1.1 | Tomato | nucleus | 69.33 | 80.71 |
Solyc02g038690.1.1 | Tomato | nucleus | 66.26 | 80.6 |
AT3G53650.1 | Thale cress | nucleus | 68.1 | 80.43 |
KRH29833 | Soybean | nucleus | 70.55 | 80.42 |
HORVU1Hr1G049920.1 | Barley | nucleus | 75.46 | 80.39 |
Bra002436.1-P | Field mustard | nucleus | 69.33 | 80.14 |
HORVU7Hr1G110170.1 | Barley | nucleus | 79.75 | 79.75 |
Solyc11g007930.1.1 | Tomato | nucleus | 67.48 | 79.71 |
EES15460 | Sorghum | nucleus | 74.23 | 79.61 |
Bra020275.1-P | Field mustard | nucleus | 69.33 | 79.58 |
PGSC0003DMT400001108 | Potato | nucleus | 69.33 | 79.58 |
Solyc06g074790.1.1 | Tomato | nucleus | 69.33 | 79.58 |
Bra002520.1-P | Field mustard | nucleus | 73.01 | 79.33 |
AT5G22880.1 | Thale cress | nucleus | 70.55 | 79.31 |
VIT_06s0004g04250.t01 | Wine grape | nucleus | 71.78 | 79.05 |
PGSC0003DMT400074994 | Potato | nucleus | 71.17 | 78.91 |
Solyc06g005390.1.1 | Tomato | nucleus | 71.17 | 78.91 |
PGSC0003DMT400018456 | Potato | nucleus | 68.71 | 78.87 |
PGSC0003DMT400077939 | Potato | nucleus | 70.55 | 78.77 |
Solyc06g075800.1.1 | Tomato | nucleus | 70.55 | 78.77 |
VIT_06s0004g04230.t01 | Wine grape | nucleus | 70.55 | 78.77 |
Bra006639.1-P | Field mustard | nucleus | 69.33 | 78.47 |
PGSC0003DMT400022099 | Potato | nucleus | 69.33 | 78.47 |
PGSC0003DMT400070382 | Potato | nucleus | 69.33 | 78.47 |
Solyc11g007920.1.1 | Tomato | nucleus | 69.33 | 78.47 |
AT1G07790.1 | Thale cress | nucleus | 71.17 | 78.38 |
KRH29831 | Soybean | nucleus | 71.17 | 78.38 |
KRH29832 | Soybean | nucleus | 71.17 | 78.38 |
KRH29836 | Soybean | nucleus | 71.17 | 78.38 |
HORVU6Hr1G008320.1 | Barley | nucleus | 75.46 | 78.34 |
GSMUA_Achr2P19080_001 | Banana | nucleus | 68.71 | 78.32 |
PGSC0003DMT400060096 | Potato | nucleus | 70.55 | 78.23 |
Solyc05g055440.1.1 | Tomato | nucleus | 70.55 | 78.23 |
AT3G45980.1 | Thale cress | nucleus | 71.78 | 78.0 |
AT5G59910.1 | Thale cress | nucleus | 71.78 | 78.0 |
KRH24830 | Soybean | nucleus | 71.17 | 77.85 |
KRH24831 | Soybean | nucleus | 71.17 | 77.85 |
KRH24833 | Soybean | nucleus | 71.17 | 77.85 |
PGSC0003DMT400022074 | Potato | nucleus | 68.71 | 77.78 |
Solyc12g013510.1.1 | Tomato | nucleus | 66.26 | 77.7 |
HORVU1Hr1G091370.1 | Barley | nucleus | 75.46 | 77.36 |
VIT_13s0019g05370.t01 | Wine grape | nucleus | 68.71 | 77.24 |
Bra035677.1-P | Field mustard | nucleus | 70.55 | 77.18 |
Bra011930.1-P | Field mustard | nucleus | 69.33 | 75.84 |
VIT_06s0004g04300.t01 | Wine grape | nucleus | 70.55 | 75.66 |
PGSC0003DMT400018455 | Potato | nucleus | 66.26 | 75.52 |
Solyc06g074780.1.1 | Tomato | nucleus | 66.26 | 75.52 |
AT2G28720.1 | Thale cress | nucleus | 69.94 | 75.5 |
HORVU7Hr1G110130.1 | Barley | nucleus | 54.6 | 75.42 |
HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 79.75 | 75.14 |
HORVU7Hr1G110330.2 | Barley | nucleus | 53.99 | 73.95 |
Bra000483.1-P | Field mustard | nucleus | 69.94 | 73.55 |
HORVU7Hr1G110190.1 | Barley | nucleus | 59.51 | 73.48 |
GSMUA_Achr7P15260_001 | Banana | nucleus | 68.1 | 73.03 |
HORVU4Hr1G009040.2 | Barley | nucleus | 76.69 | 72.67 |
HORVU1Hr1G078480.6 | Barley | nucleus | 78.53 | 71.11 |
HORVU1Hr1G078530.3 | Barley | nucleus | 77.91 | 70.56 |
PGSC0003DMT400074020 | Potato | nucleus | 58.28 | 70.37 |
HORVU2Hr1G077630.1 | Barley | nucleus | 77.91 | 70.17 |
HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 78.53 | 69.95 |
HORVU1Hr1G072190.4 | Barley | nucleus | 75.46 | 69.89 |
HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 49.08 | 68.38 |
HORVU1Hr1G058500.1 | Barley | nucleus | 76.07 | 67.76 |
HORVU1Hr1G085540.1 | Barley | nucleus | 72.39 | 65.92 |
CDX71015 | Canola | nucleus | 26.38 | 65.15 |
HORVU6Hr1G083110.1 | Barley | nucleus | 68.1 | 64.91 |
HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 79.75 | 62.2 |
Solyc10g044580.1.1 | Tomato | nucleus | 50.92 | 61.48 |
HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 77.3 | 59.72 |
HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 76.69 | 58.96 |
HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 65.03 | 57.61 |
Zm00001d048491_P001 | Maize | plastid | 77.3 | 52.94 |
HORVU3Hr1G086610.2 | Barley | nucleus | 68.1 | 52.86 |
HORVU1Hr1G066130.1 | Barley | nucleus | 78.53 | 52.67 |
VIT_06s0004g04240.t01 | Wine grape | nucleus | 71.78 | 50.87 |
GSMUA_Achr6P33320_001 | Banana | nucleus | 61.35 | 48.31 |
HORVU4Hr1G000750.1 | Barley | nucleus | 36.2 | 33.15 |
PGSC0003DMT400074018 | Potato | nucleus | 50.92 | 21.78 |
Protein Annotations
Gene3D:1.10.20.10 | MapMan:12.1.3 | UniProt:A0A287TEP4 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0005694 | GO:GO:0046982 | EnsemblPlantsGene:HORVU6Hr1G015760 | EnsemblPlants:HORVU6Hr1G015760.1 | InterPro:Histone-fold |
InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 | PFAM:PF00125 | PRINTS:PR00621 | ScanProsite:PS00357 |
PANTHER:PTHR23428 | PANTHER:PTHR23428:SF62 | SMART:SM00427 | SUPFAM:SSF47113 | UniParc:UPI000B48719B | SEG:seg |
Description
Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A287TEP4]
Coordinates
chrchr6H:-:35101858..35102754
Molecular Weight (calculated)
17734.7 Da
IEP (calculated)
10.879
GRAVY (calculated)
-0.625
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: NPSPLSVSLL LLQPTQTSLS PSKKQQQSMA PKAAEKKPVE KTPAGKKPKA EKKVPASKEG GDKKGKKKSK KSVETYKIYI FKVLKQVHPD IGISSKAMSI
101: MNSFINDIFE KLAGESAKLA RYNKKPTITS REIQTSVRLV LPGELAKHAV SEGTKAVTKF TSS
101: MNSFINDIFE KLAGESAKLA RYNKKPTITS REIQTSVRLV LPGELAKHAV SEGTKAVTKF TSS
001: MAPKAAEKKP AEKKPAGKAP AEKLPKAEKK ISKDAGGSEK KKKKSKKSVE TYKIYIFKVL KQVHPDVGIS GKAMGIMNSF INDIFEKLAQ ESSKLARYNK
101: KPTITSREIQ TAVRLVLPGE LAKHAVSEGT KAVTKFTS
101: KPTITSREIQ TAVRLVLPGE LAKHAVSEGT KAVTKFTS
Arabidopsis Description
Histone H2B.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.