Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400074020 | Potato | nucleus | 25.46 | 71.85 |
GSMUA_Achr8P20900_001 | Banana | nucleus | 11.55 | 66.67 |
GSMUA_Achr9P04060_001 | Banana | nucleus | 20.47 | 66.67 |
PGSC0003DMT400043578 | Potato | nucleus | 24.67 | 66.67 |
PGSC0003DMT400070382 | Potato | nucleus | 24.67 | 65.28 |
GSMUA_Achr10P... | Banana | nucleus | 11.29 | 65.15 |
TraesCS7B01G394800.1 | Wheat | nucleus | 16.54 | 64.95 |
TraesCS3A01G075800.1 | Wheat | nucleus | 16.27 | 64.58 |
TraesCS6B01G055300.1 | Wheat | nucleus | 16.27 | 64.58 |
TraesCS6B01G055500.1 | Wheat | nucleus | 16.27 | 64.58 |
Os05t0460475-00 | Rice | nucleus | 17.85 | 64.15 |
PGSC0003DMT400070383 | Potato | nucleus | 23.88 | 64.08 |
PGSC0003DMT400022099 | Potato | nucleus | 24.15 | 63.89 |
PGSC0003DMT400018455 | Potato | nucleus | 23.88 | 63.64 |
PGSC0003DMT400018456 | Potato | nucleus | 23.62 | 63.38 |
PGSC0003DMT400060096 | Potato | nucleus | 24.41 | 63.27 |
PGSC0003DMT400022074 | Potato | nucleus | 23.88 | 63.19 |
Bra006685.1-P | Field mustard | nucleus | 23.36 | 63.12 |
CDX71064 | Canola | nucleus | 23.36 | 63.12 |
CDX88732 | Canola | nucleus | 23.36 | 63.12 |
PGSC0003DMT400077939 | Potato | nucleus | 24.15 | 63.01 |
TraesCS7B01G394500.1 | Wheat | nucleus | 15.75 | 62.5 |
TraesCS6D01G046500.1 | Wheat | nucleus | 10.76 | 62.12 |
VIT_13s0019g05370.t01 | Wine grape | nucleus | 23.62 | 62.07 |
Bra002436.1-P | Field mustard | nucleus | 22.83 | 61.7 |
CDY26964 | Canola | nucleus | 22.83 | 61.7 |
KRH29833 | Soybean | nucleus | 23.1 | 61.54 |
CDX71019 | Canola | nucleus | 22.83 | 61.27 |
TraesCS2A01G312400.1 | Wheat | nucleus | 18.9 | 61.02 |
GSMUA_Achr2P19080_001 | Banana | nucleus | 22.83 | 60.84 |
KRH29831 | Soybean | nucleus | 23.62 | 60.81 |
KRH29832 | Soybean | nucleus | 23.62 | 60.81 |
KRH29836 | Soybean | nucleus | 23.62 | 60.81 |
HORVU6Hr1G015790.1 | Barley | nucleus | 21.52 | 60.74 |
TraesCS6A01G086400.1 | Wheat | nucleus | 21.52 | 60.74 |
TraesCS6B01G116000.1 | Wheat | nucleus | 21.52 | 60.74 |
TraesCSU01G077200.1 | Wheat | nucleus | 21.52 | 60.74 |
TraesCSU01G077400.1 | Wheat | nucleus | 21.52 | 60.74 |
AT5G22880.1 | Thale cress | nucleus | 23.1 | 60.69 |
Bra006639.1-P | Field mustard | nucleus | 22.83 | 60.42 |
CDX88779 | Canola | nucleus | 22.83 | 60.42 |
KRH24830 | Soybean | nucleus | 23.62 | 60.4 |
KRH24831 | Soybean | nucleus | 23.62 | 60.4 |
KRH24833 | Soybean | nucleus | 23.62 | 60.4 |
TraesCS3A01G357500.1 | Wheat | nucleus | 21.52 | 60.29 |
TraesCS3D01G075900.1 | Wheat | nucleus | 21.52 | 60.29 |
TraesCS3D01G351300.1 | Wheat | nucleus | 21.52 | 60.29 |
TraesCS3D01G351400.1 | Wheat | nucleus | 21.52 | 60.29 |
TraesCS6A01G040500.1 | Wheat | nucleus | 21.52 | 60.29 |
TraesCS6D01G046200.1 | Wheat | nucleus, unclear | 21.52 | 60.29 |
TraesCS6D01G046600.1 | Wheat | nucleus | 21.52 | 60.29 |
TraesCS3A01G357400.1 | Wheat | nucleus | 21.78 | 60.14 |
TraesCS3B01G114600.1 | Wheat | nucleus | 21.26 | 60.0 |
TraesCS3B01G390100.1 | Wheat | nucleus | 21.26 | 60.0 |
TraesCS6A01G086200.1 | Wheat | nucleus | 21.26 | 60.0 |
TraesCS7B01G405800.1 | Wheat | nucleus | 21.78 | 59.71 |
TraesCS3B01G390000.1 | Wheat | nucleus | 21.26 | 59.56 |
TraesCS3D01G099000.1 | Wheat | nucleus | 21.26 | 59.56 |
TraesCS3B01G114400.1 | Wheat | nucleus | 21.0 | 59.26 |
EES18353 | Sorghum | nucleus | 22.83 | 59.18 |
PGSC0003DMT400074994 | Potato | nucleus | 22.83 | 59.18 |
PGSC0003DMT400001108 | Potato | nucleus | 22.05 | 59.15 |
CDX92329 | Canola | nucleus | 22.31 | 59.03 |
HORVU0Hr1G006420.1 | Barley | nucleus | 21.26 | 58.7 |
HORVU3Hr1G034060.1 | Barley | nucleus | 21.26 | 58.7 |
TraesCS3D01G342400.1 | Wheat | nucleus | 21.26 | 58.7 |
TraesCS7A01G490900.1 | Wheat | nucleus | 21.26 | 58.7 |
TraesCS7A01G491000.1 | Wheat | nucleus | 21.26 | 58.7 |
TraesCS7B01G394400.1 | Wheat | nucleus | 21.26 | 58.7 |
TraesCS7B01G394700.1 | Wheat | nucleus | 21.26 | 58.7 |
TraesCS4D01G205300.1 | Wheat | nucleus | 21.78 | 58.45 |
EES00304 | Sorghum | nucleus | 22.83 | 58.39 |
Os01t0839500-00 | Rice | nucleus | 21.26 | 58.27 |
OQU92807 | Sorghum | nucleus | 22.57 | 58.11 |
TraesCS1B01G294500.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G169300.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G169400.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G169500.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G169700.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G169800.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G169900.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G170400.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G170500.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G170600.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G170700.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G170900.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G171000.1 | Wheat | nucleus | 22.57 | 58.11 |
TraesCSU01G171100.1 | Wheat | nucleus | 22.57 | 58.11 |
EES00399 | Sorghum | nucleus | 22.83 | 58.0 |
TraesCS7B01G394100.1 | Wheat | nucleus | 21.0 | 57.97 |
TraesCS7B01G394600.1 | Wheat | nucleus | 21.0 | 57.97 |
Os03t0279000-00 | Rice | nucleus | 23.1 | 57.89 |
HORVU7Hr1G110290.1 | Barley | nucleus | 15.49 | 57.84 |
TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 21.52 | 57.75 |
TraesCS7B01G394900.1 | Wheat | nucleus | 21.52 | 57.75 |
TraesCS7D01G477300.1 | Wheat | nucleus | 21.52 | 57.75 |
EES00305 | Sorghum | nucleus | 22.57 | 57.72 |
TraesCS4A01G099900.1 | Wheat | nucleus | 22.57 | 57.72 |
Zm00001d039821_P001 | Maize | plastid | 22.57 | 57.72 |
TraesCS7D01G485700.1 | Wheat | nucleus | 21.0 | 57.55 |
Zm00001d011236_P001 | Maize | plastid | 22.57 | 57.33 |
TraesCS6A01G040200.1 | Wheat | nucleus | 20.73 | 57.25 |
TraesCS5A01G384300.1 | Wheat | nucleus | 22.83 | 57.24 |
TraesCS5B01G389100.1 | Wheat | nucleus | 22.83 | 57.24 |
Zm00001d007084_P001 | Maize | plastid | 22.83 | 57.24 |
TraesCS1A01G190400.1 | Wheat | nucleus | 21.0 | 57.14 |
TraesCS4B01G204400.1 | Wheat | nucleus | 22.31 | 57.05 |
TraesCS7D01G477400.1 | Wheat | nucleus | 21.26 | 57.04 |
TraesCS1B01G357600.1 | Wheat | nucleus | 21.52 | 56.94 |
EES03855 | Sorghum | nucleus | 20.47 | 56.93 |
Zm00001d012423_P001 | Maize | plastid | 20.47 | 56.93 |
Zm00001d042930_P001 | Maize | plastid | 20.47 | 56.93 |
TraesCS6A01G040400.1 | Wheat | nucleus | 20.73 | 56.83 |
Zm00001d044247_P001 | Maize | plastid | 22.05 | 56.76 |
TraesCS4A01G030500.1 | Wheat | nucleus | 21.0 | 56.74 |
EES15460 | Sorghum | nucleus | 22.57 | 56.58 |
Os05t0574300-00 | Rice | nucleus | 22.57 | 56.58 |
TraesCS2D01G310800.1 | Wheat | nucleus | 22.57 | 56.58 |
TraesCS3D01G088900.1 | Wheat | nucleus | 22.57 | 56.58 |
TraesCS4A01G260400.1 | Wheat | nucleus | 22.57 | 56.58 |
TraesCS4D01G054200.1 | Wheat | nucleus | 22.57 | 56.58 |
Zm00001d051591_P001 | Maize | plastid | 22.83 | 56.49 |
TraesCS6D01G046400.1 | Wheat | nucleus | 20.73 | 56.43 |
EES15092 | Sorghum | nucleus | 22.31 | 56.29 |
TraesCS3A01G088800.1 | Wheat | nucleus | 22.31 | 56.29 |
TraesCS3A01G102500.1 | Wheat | nucleus | 21.26 | 56.25 |
TraesCS6A01G034500.1 | Wheat | nucleus | 21.26 | 56.25 |
TraesCS6A01G035000.1 | Wheat | nucleus | 21.26 | 56.25 |
TraesCS6B01G049300.1 | Wheat | nucleus | 21.26 | 56.25 |
EER96770 | Sorghum | nucleus | 22.57 | 56.21 |
Os01t0149600-01 | Rice | nucleus | 22.57 | 56.21 |
Os01t0152900-00 | Rice | nucleus | 22.57 | 56.21 |
HORVU6Hr1G087190.1 | Barley | nucleus | 22.05 | 56.0 |
TraesCS1D01G396600.1 | Wheat | golgi, nucleus, unclear | 22.05 | 56.0 |
Zm00001d025913_P001 | Maize | plastid | 22.05 | 56.0 |
Zm00001d050100_P001 | Maize | plastid | 22.05 | 56.0 |
GSMUA_Achr7P15260_001 | Banana | nucleus | 22.31 | 55.92 |
TraesCS1A01G228700.1 | Wheat | nucleus | 22.31 | 55.92 |
TraesCS1B01G244900.1 | Wheat | nucleus | 22.31 | 55.92 |
TraesCS1B01G245300.1 | Wheat | nucleus | 22.31 | 55.92 |
TraesCS4B01G054200.1 | Wheat | nucleus | 22.31 | 55.92 |
Zm00001d005789_P001 | Maize | plastid | 22.31 | 55.92 |
EER97675 | Sorghum | nucleus | 22.05 | 55.63 |
TraesCS1B01G416600.1 | Wheat | nucleus | 22.05 | 55.63 |
Zm00001d020580_P001 | Maize | plastid | 22.05 | 55.63 |
HORVU1Hr1G049920.1 | Barley | nucleus | 22.31 | 55.56 |
OQU87075 | Sorghum | nucleus | 22.31 | 55.56 |
Os01t0152300-00 | Rice | nucleus | 22.31 | 55.56 |
Os01t0153100-00 | Rice | nucleus | 22.31 | 55.56 |
TraesCS1B01G192500.1 | Wheat | nucleus | 22.31 | 55.56 |
TraesCS6B01G048800.1 | Wheat | nucleus | 21.0 | 55.56 |
TraesCS6B01G049100.1 | Wheat | nucleus | 21.0 | 55.56 |
TraesCS6B01G082600.1 | Wheat | nucleus | 21.0 | 55.56 |
Os01t0153300-00 | Rice | nucleus | 22.57 | 55.48 |
TraesCS1D01G233300.1 | Wheat | nucleus | 22.05 | 55.26 |
TraesCS4B01G275400.1 | Wheat | nucleus | 22.31 | 55.19 |
TraesCS6B01G048500.1 | Wheat | unclear | 21.0 | 55.17 |
TraesCS1A01G388600.1 | Wheat | nucleus | 22.05 | 54.9 |
TraesCS1D01G194600.1 | Wheat | nucleus | 22.05 | 54.9 |
EES07386 | Sorghum | nucleus | 22.31 | 54.84 |
Solyc10g044580.1.1 | Tomato | nucleus | 19.42 | 54.81 |
TraesCS5D01G020000.1 | Wheat | nucleus | 22.57 | 54.78 |
TraesCS5B01G058200.1 | Wheat | nucleus | 22.83 | 54.72 |
TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 22.83 | 54.72 |
Zm00001d032070_P001 | Maize | plastid | 21.52 | 54.67 |
TraesCS4A01G030400.1 | Wheat | nucleus | 22.05 | 54.55 |
TraesCS5A01G051900.1 | Wheat | nucleus | 22.31 | 54.49 |
TraesCS6D01G040200.1 | Wheat | nucleus | 20.73 | 54.48 |
TraesCS6D01G040600.1 | Wheat | nucleus | 20.73 | 54.48 |
TraesCS1A01G361600.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1A01G367900.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1A01G368000.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1B01G386200.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1B01G386400.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1B01G386500.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1B01G386600.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1B01G386700.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1D01G366300.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1D01G373800.1 | Wheat | nucleus | 21.78 | 54.25 |
TraesCS1D01G373900.1 | Wheat | nucleus | 21.78 | 54.25 |
HORVU7Hr1G110330.2 | Barley | nucleus | 16.8 | 53.78 |
HORVU3Hr1G013530.1 | Barley | nucleus | 23.1 | 53.66 |
TraesCS1B01G378300.1 | Wheat | nucleus | 21.52 | 53.59 |
TraesCS6B01G376900.1 | Wheat | nucleus | 21.26 | 53.29 |
TraesCS6B01G084900.1 | Wheat | nucleus | 21.52 | 53.25 |
TraesCS5D01G393900.1 | Wheat | nucleus | 22.83 | 53.05 |
TraesCS3D01G351500.1 | Wheat | nucleus | 17.06 | 52.85 |
TraesCS6D01G326800.1 | Wheat | nucleus, unclear | 21.26 | 52.6 |
TraesCSU01G081100.1 | Wheat | nucleus | 21.26 | 52.6 |
HORVU6Hr1G005950.2 | Barley | nucleus | 21.26 | 52.26 |
TraesCS3B01G390300.1 | Wheat | nucleus | 18.37 | 52.24 |
HORVU6Hr1G008320.1 | Barley | nucleus | 21.52 | 52.23 |
TraesCS1D01G232900.1 | Wheat | nucleus | 21.52 | 52.23 |
HORVU7Hr1G110130.1 | Barley | nucleus | 16.01 | 51.69 |
HORVU7Hr1G110190.1 | Barley | nucleus | 17.85 | 51.52 |
HORVU1Hr1G091370.1 | Barley | nucleus | 21.26 | 50.94 |
HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 21.78 | 50.92 |
HORVU4Hr1G009040.2 | Barley | nucleus | 22.83 | 50.58 |
HORVU7Hr1G110170.1 | Barley | nucleus | 21.52 | 50.31 |
HORVU1Hr1G072190.4 | Barley | nucleus | 23.1 | 50.0 |
HORVU3Hr1G013680.1 | Barley | nucleus | 22.31 | 50.0 |
HORVU4Hr1G070240.1 | Barley | nucleus | 21.78 | 50.0 |
HORVU2Hr1G077630.1 | Barley | nucleus | 23.36 | 49.17 |
HORVU1Hr1G058500.1 | Barley | nucleus | 23.1 | 48.09 |
HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 23.1 | 48.09 |
HORVU6Hr1G083110.1 | Barley | nucleus | 21.52 | 47.95 |
HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 14.7 | 47.86 |
HORVU1Hr1G078480.6 | Barley | nucleus | 22.57 | 47.78 |
HORVU1Hr1G085540.1 | Barley | nucleus | 22.31 | 47.49 |
HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 21.52 | 47.4 |
HORVU1Hr1G078530.3 | Barley | nucleus | 22.05 | 46.67 |
HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 24.93 | 45.45 |
Os08t0490900-00 | Rice | nucleus | 24.15 | 43.4 |
HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 23.88 | 42.92 |
HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 19.95 | 41.3 |
HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 22.57 | 40.76 |
HORVU1Hr1G066130.1 | Barley | nucleus | 25.98 | 40.74 |
HORVU3Hr1G086610.2 | Barley | nucleus | 22.31 | 40.48 |
GSMUA_Achr6P33320_001 | Banana | nucleus | 21.78 | 40.1 |
Zm00001d048491_P001 | Maize | plastid | 24.93 | 39.92 |
TraesCS6B01G081700.1 | Wheat | nucleus | 14.7 | 34.15 |
TraesCS6D01G063200.1 | Wheat | nucleus | 14.44 | 27.78 |
TraesCS6A01G061400.1 | Wheat | nucleus | 14.17 | 25.84 |
PGSC0003DMT400018366 | Potato | mitochondrion, nucleus | 15.75 | 21.98 |
Protein Annotations
Gene3D:1.10.20.10 | MapMan:12.1.3 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0005694 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 |
UniProt:M1CT05 | PFAM:PF00125 | EnsemblPlantsGene:PGSC0003DMG400028770 | PGSC:PGSC0003DMG400028770 | EnsemblPlants:PGSC0003DMT400074018 | PRINTS:PR00621 |
PANTHER:PTHR23428 | PANTHER:PTHR23428:SF155 | SMART:SM00427 | SUPFAM:SSF47113 | UniParc:UPI000294D77B | : |
Description
Histone H2B [Source:PGSC_GENE;Acc:PGSC0003DMG400028770]
Coordinates
chr10:-:33311747..33319944
Molecular Weight (calculated)
43899.2 Da
IEP (calculated)
10.240
GRAVY (calculated)
-0.993
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSRRTTERI NDLDLDRLKS QNPKDKNPRQ TGDGMEQWAH HRHGWNREID DGWKDRDREW RDHGTNWNER DGDKEEYVPP HERQNPKEQM ADPENFNTED
101: ILGRILNKLE GSEKVEKLKF WENGSWRDKG PVGDSPKSNS PKAPSDRPSA PYFLKLFCNI RRATFSSPSG FGDPPIGFGH RRPMIIFKSF YFGTFGEPDL
201: ARQMDSVREF YSAYGKLVPK GKKKSSAFKP VDFVVIRGKK VKCSCMEINE KPTKKKSSAE KAPTTATEKS KSGKKLPKDA TRDKKIKGLK NYVNTYKIYI
301: FKVLKQVHPD IEIASKAMGI MNNFINDIFE RLAEEFSRLS RYNRKPTITF RVIQSSLQLV LPSELAKHIV SEGTKGGCQI H
101: ILGRILNKLE GSEKVEKLKF WENGSWRDKG PVGDSPKSNS PKAPSDRPSA PYFLKLFCNI RRATFSSPSG FGDPPIGFGH RRPMIIFKSF YFGTFGEPDL
201: ARQMDSVREF YSAYGKLVPK GKKKSSAFKP VDFVVIRGKK VKCSCMEINE KPTKKKSSAE KAPTTATEKS KSGKKLPKDA TRDKKIKGLK NYVNTYKIYI
301: FKVLKQVHPD IEIASKAMGI MNNFINDIFE RLAEEFSRLS RYNRKPTITF RVIQSSLQLV LPSELAKHIV SEGTKGGCQI H
001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
Arabidopsis Description
HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.