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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G046600.1 Wheat nucleus 98.53 98.53
TraesCS3A01G075800.1 Wheat nucleus 68.38 96.88
HORVU0Hr1G006420.1 Barley nucleus 95.59 94.2
HORVU3Hr1G034060.1 Barley nucleus 95.59 94.2
TraesCS7A01G490900.1 Wheat nucleus 95.59 94.2
TraesCS6A01G086400.1 Wheat nucleus 93.38 94.07
TraesCS6A01G086200.1 Wheat nucleus 92.65 93.33
TraesCS2A01G312400.1 Wheat nucleus 80.88 93.22
TraesCS7A01G491000.1 Wheat nucleus 94.12 92.75
TraesCS6A01G040200.1 Wheat nucleus 93.38 92.03
TraesCS6A01G040400.1 Wheat nucleus 93.38 91.37
TraesCS7A01G491100.1 Wheat extracellular, nucleus, unclear 93.38 89.44
TraesCS3A01G102500.1 Wheat nucleus 92.65 87.5
TraesCS6A01G035000.1 Wheat nucleus 92.65 87.5
TraesCS6A01G034500.1 Wheat nucleus 91.91 86.81
TraesCS4A01G030500.1 Wheat nucleus 89.71 86.52
TraesCS1A01G190400.1 Wheat nucleus 88.97 86.43
GSMUA_Achr9P04060_001 Banana nucleus 74.26 86.32
TraesCS3A01G357500.1 Wheat nucleus 86.03 86.03
TraesCS3A01G357400.1 Wheat nucleus 86.03 84.78
EES00304 Sorghum nucleus 92.65 84.56
EES00305 Sorghum nucleus 91.91 83.89
Zm00001d039821_P001 Maize plastid 91.91 83.89
KRG92106 Soybean nucleus 83.82 83.82
Bra007018.1-P Field mustard nucleus 84.56 83.33
EES00399 Sorghum nucleus 91.91 83.33
Bra039810.1-P Field mustard nucleus 83.82 82.61
KRG95819 Soybean nucleus 83.82 82.61
KRH67549 Soybean nucleus 83.82 82.61
TraesCS4A01G099900.1 Wheat nucleus 90.44 82.55
Bra038267.1-P Field mustard nucleus 83.09 82.48
EES15460 Sorghum nucleus 91.91 82.24
TraesCS4A01G260400.1 Wheat nucleus 91.91 82.24
TraesCS3A01G088800.1 Wheat nucleus 91.18 82.12
KRH26542 Soybean nucleus 80.88 82.09
KRH22818 Soybean nucleus 80.15 81.95
KRH34681 Soybean nucleus 82.35 81.75
TraesCS1A01G388600.1 Wheat nucleus 91.91 81.7
KRH19721 Soybean nucleus 83.09 81.3
AT2G37470.1 Thale cress nucleus 82.35 81.16
AT3G53650.1 Thale cress nucleus 82.35 81.16
Bra003150.1-P Field mustard nucleus 82.35 81.16
AT5G02570.1 Thale cress nucleus 78.68 81.06
TraesCS1A01G361600.1 Wheat nucleus 91.18 81.05
TraesCS1A01G367900.1 Wheat nucleus 91.18 81.05
TraesCS1A01G368000.1 Wheat nucleus 91.18 81.05
AT3G09480.1 Thale cress nucleus 75.0 80.95
TraesCS5A01G384300.1 Wheat nucleus 90.44 80.92
TraesCS4A01G030400.1 Wheat nucleus 91.18 80.52
TraesCS1A01G228700.1 Wheat nucleus 89.71 80.26
PGSC0003DMT400043578 Potato nucleus 83.09 80.14
Solyc03g071620.1.1 Tomato nucleus 83.09 80.14
HORVU7Hr1G110170.1 Barley nucleus 95.59 79.75
KRH29833 Soybean nucleus 83.82 79.72
PGSC0003DMT400077939 Potato nucleus 85.29 79.45
Solyc06g075800.1.1 Tomato nucleus 85.29 79.45
AT3G46030.1 Thale cress nucleus 84.56 79.31
Bra006685.1-P Field mustard nucleus 81.62 78.72
GSMUA_Achr2P19080_001 Banana nucleus 82.35 78.32
PGSC0003DMT400074994 Potato nucleus 84.56 78.23
Solyc06g005390.1.1 Tomato nucleus 84.56 78.23
Bra020275.1-P Field mustard nucleus 81.62 78.17
PGSC0003DMT400070383 Potato nucleus 81.62 78.17
Bra002436.1-P Field mustard nucleus 80.88 78.01
PGSC0003DMT400070382 Potato nucleus 82.35 77.78
VIT_06s0004g04250.t01 Wine grape nucleus 84.56 77.7
Solyc02g038690.1.1 Tomato nucleus 76.47 77.61
TraesCS5A01G051900.1 Wheat nucleus 88.97 77.56
Bra002520.1-P Field mustard nucleus 85.29 77.33
AT5G22880.1 Thale cress nucleus 82.35 77.24
KRH29831 Soybean nucleus 83.82 77.03
KRH29832 Soybean nucleus 83.82 77.03
KRH29836 Soybean nucleus 83.82 77.03
Solyc11g007930.1.1 Tomato nucleus 77.94 76.81
Solyc06g074790.1.1 Tomato nucleus 80.15 76.76
VIT_06s0004g04230.t01 Wine grape nucleus 82.35 76.71
VIT_13s0019g05370.t01 Wine grape nucleus 81.62 76.55
KRH24830 Soybean nucleus 83.82 76.51
KRH24831 Soybean nucleus 83.82 76.51
KRH24833 Soybean nucleus 83.82 76.51
Solyc11g066430.1.1 Tomato nucleus 78.68 76.43
PGSC0003DMT400022074 Potato nucleus 80.88 76.39
PGSC0003DMT400022099 Potato nucleus 80.88 76.39
Solyc11g007920.1.1 Tomato nucleus 80.88 76.39
AT1G07790.1 Thale cress nucleus 83.09 76.35
PGSC0003DMT400060096 Potato nucleus 82.35 76.19
PGSC0003DMT400018456 Potato nucleus 79.41 76.06
AT3G45980.1 Thale cress nucleus 83.82 76.0
AT5G59910.1 Thale cress nucleus 83.82 76.0
Bra006639.1-P Field mustard nucleus 80.15 75.69
Solyc12g013510.1.1 Tomato nucleus 77.21 75.54
Solyc05g055440.1.1 Tomato nucleus 81.62 75.51
PGSC0003DMT400001108 Potato nucleus 78.68 75.35
HORVU7Hr1G110090.1 Barley nucleus, plastid 95.59 75.14
AT2G28720.1 Thale cress nucleus 83.09 74.83
Solyc06g074780.1.1 Tomato nucleus 78.68 74.83
Bra011930.1-P Field mustard nucleus 81.62 74.5
Bra035677.1-P Field mustard nucleus 81.62 74.5
PGSC0003DMT400018455 Potato nucleus 77.94 74.13
VIT_06s0004g04300.t01 Wine grape nucleus 82.35 73.68
GSMUA_Achr7P15260_001 Banana nucleus 80.88 72.37
Bra000483.1-P Field mustard nucleus 81.62 71.61
PGSC0003DMT400074020 Potato nucleus 68.38 68.89
CDX71015 Canola nucleus 30.88 63.64
Solyc10g044580.1.1 Tomato nucleus 58.09 58.52
TraesCS4A01G311600.1 Wheat mitochondrion 37.5 57.3
Zm00001d048491_P001 Maize plastid 91.91 52.52
VIT_06s0004g04240.t01 Wine grape nucleus 83.09 49.13
GSMUA_Achr6P33320_001 Banana nucleus 72.06 47.34
TraesCS6A01G061400.1 Wheat nucleus 59.56 38.76
PGSC0003DMT400074018 Potato nucleus 60.29 21.52
Protein Annotations
Gene3D:1.10.20.10MapMan:12.1.3GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0046982
InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2BInterPro:IPR009072PFAM:PF00125PRINTS:PR00621
ScanProsite:PS00357PANTHER:PTHR23428PANTHER:PTHR23428:SF72SMART:SM00427SUPFAM:SSF47113EnsemblPlantsGene:TraesCS6A01G040500
EnsemblPlants:TraesCS6A01G040500.1SEG:seg::::
Description
No Description!
Coordinates
chr6A:-:21137343..21137753
Molecular Weight (calculated)
14854.3 Da
IEP (calculated)
10.856
GRAVY (calculated)
-0.635
Length
136 amino acids
Sequence
(BLAST)
001: MAPKAEKKPV ATEKAPAGKK PKAEKRPPAS KEGSEKKGKK KAKKSVETYK IYIFKVLKQV HPDIGISSKA MSIMNSFIND IFEKLAGESA KLARYNKKPT
101: ITSREIQTSV RLVLPGELAK HAVSEGTKAV TKFTSA
Best Arabidopsis Sequence Match ( AT1G07790.1 )
(BLAST)
001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
Arabidopsis Description
HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.