Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P20900_001 | Banana | nucleus | 60.61 | 60.61 |
| TraesCS6D01G046500.1 | Wheat | nucleus | 60.61 | 60.61 |
| GSMUA_Achr10P... | Banana | nucleus | 59.09 | 59.09 |
| TraesCS7B01G394800.1 | Wheat | nucleus | 66.67 | 45.36 |
| TraesCS6B01G055300.1 | Wheat | nucleus | 65.15 | 44.79 |
| TraesCS6B01G055500.1 | Wheat | nucleus | 65.15 | 44.79 |
| TraesCS3A01G075800.1 | Wheat | nucleus | 63.64 | 43.75 |
| TraesCS7B01G394500.1 | Wheat | nucleus | 63.64 | 43.75 |
| Os05t0460475-00 | Rice | nucleus | 60.61 | 37.74 |
| GSMUA_Achr9P04060_001 | Banana | nucleus | 66.67 | 37.61 |
| TraesCS2A01G312400.1 | Wheat | nucleus | 66.67 | 37.29 |
| HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 62.12 | 35.04 |
| HORVU7Hr1G110130.1 | Barley | nucleus | 62.12 | 34.75 |
| HORVU7Hr1G110330.2 | Barley | nucleus | 62.12 | 34.45 |
| TraesCS3D01G351500.1 | Wheat | nucleus | 63.64 | 34.15 |
| CDX86049 | Canola | nucleus | 66.67 | 33.33 |
| TraesCS3B01G390100.1 | Wheat | nucleus | 68.18 | 33.33 |
| TraesCS3A01G357500.1 | Wheat | nucleus | 68.18 | 33.09 |
| TraesCS3D01G351300.1 | Wheat | nucleus | 68.18 | 33.09 |
| TraesCS3D01G351400.1 | Wheat | nucleus | 68.18 | 33.09 |
| TraesCS3A01G357400.1 | Wheat | nucleus | 68.18 | 32.61 |
| TraesCS3B01G390000.1 | Wheat | nucleus | 66.67 | 32.35 |
| CDX99134 | Canola | nucleus | 66.67 | 32.12 |
| CDY52745 | Canola | nucleus | 66.67 | 32.12 |
| EES03855 | Sorghum | nucleus | 66.67 | 32.12 |
| Zm00001d012423_P001 | Maize | plastid | 66.67 | 32.12 |
| Zm00001d042930_P001 | Maize | plastid | 66.67 | 32.12 |
| TraesCS3B01G390300.1 | Wheat | nucleus | 65.15 | 32.09 |
| CDY30852 | Canola | nucleus | 66.67 | 31.88 |
| HORVU6Hr1G015790.1 | Barley | nucleus | 65.15 | 31.85 |
| TraesCS6A01G086200.1 | Wheat | nucleus | 65.15 | 31.85 |
| TraesCS6A01G086400.1 | Wheat | nucleus | 65.15 | 31.85 |
| TraesCS6B01G116000.1 | Wheat | nucleus | 65.15 | 31.85 |
| TraesCSU01G077200.1 | Wheat | nucleus | 65.15 | 31.85 |
| CDY09241 | Canola | nucleus | 68.18 | 31.69 |
| Os01t0839500-00 | Rice | nucleus | 66.67 | 31.65 |
| TraesCS3D01G099000.1 | Wheat | nucleus | 65.15 | 31.62 |
| TraesCS6D01G046200.1 | Wheat | nucleus, unclear | 65.15 | 31.62 |
| TraesCS1A01G190400.1 | Wheat | nucleus | 66.67 | 31.43 |
| TraesCS6D01G046400.1 | Wheat | nucleus | 66.67 | 31.43 |
| CDX71064 | Canola | nucleus | 66.67 | 31.21 |
| CDX88732 | Canola | nucleus | 66.67 | 31.21 |
| CDY26964 | Canola | nucleus | 66.67 | 31.21 |
| TraesCS4A01G030500.1 | Wheat | nucleus | 66.67 | 31.21 |
| TraesCS3D01G342400.1 | Wheat | nucleus | 65.15 | 31.16 |
| TraesCS6A01G040200.1 | Wheat | nucleus | 65.15 | 31.16 |
| TraesCS7A01G491000.1 | Wheat | nucleus | 65.15 | 31.16 |
| TraesCS7B01G394600.1 | Wheat | nucleus | 65.15 | 31.16 |
| TraesCS7B01G394700.1 | Wheat | nucleus | 65.15 | 31.16 |
| TraesCS3B01G114400.1 | Wheat | nucleus | 63.64 | 31.11 |
| TraesCS3B01G114600.1 | Wheat | nucleus | 63.64 | 31.11 |
| TraesCSU01G077400.1 | Wheat | nucleus | 63.64 | 31.11 |
| CDX71019 | Canola | nucleus | 66.67 | 30.99 |
| TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 66.67 | 30.99 |
| TraesCS7B01G394900.1 | Wheat | nucleus | 66.67 | 30.99 |
| TraesCS7D01G477300.1 | Wheat | nucleus | 66.67 | 30.99 |
| TraesCS6A01G040400.1 | Wheat | nucleus | 65.15 | 30.94 |
| TraesCS3D01G075900.1 | Wheat | nucleus | 63.64 | 30.88 |
| TraesCS6A01G040500.1 | Wheat | nucleus | 63.64 | 30.88 |
| TraesCS6D01G046600.1 | Wheat | nucleus | 63.64 | 30.88 |
| CDX88779 | Canola | nucleus | 66.67 | 30.56 |
| HORVU0Hr1G006420.1 | Barley | nucleus | 63.64 | 30.43 |
| HORVU3Hr1G034060.1 | Barley | nucleus | 63.64 | 30.43 |
| TraesCS7A01G490900.1 | Wheat | nucleus | 63.64 | 30.43 |
| TraesCS7B01G394100.1 | Wheat | nucleus | 63.64 | 30.43 |
| TraesCS7B01G394400.1 | Wheat | nucleus | 63.64 | 30.43 |
| TraesCS6B01G048500.1 | Wheat | unclear | 66.67 | 30.34 |
| TraesCS6D01G040600.1 | Wheat | nucleus | 66.67 | 30.34 |
| TraesCS4D01G205300.1 | Wheat | nucleus | 65.15 | 30.28 |
| TraesCS7D01G477400.1 | Wheat | nucleus | 65.15 | 30.28 |
| TraesCS7B01G405800.1 | Wheat | nucleus | 63.64 | 30.22 |
| GSMUA_Achr2P19080_001 | Banana | nucleus | 65.15 | 30.07 |
| CDX80214 | Canola | nucleus | 68.18 | 30.0 |
| CDY31584 | Canola | nucleus | 68.18 | 30.0 |
| TraesCS1B01G357600.1 | Wheat | nucleus | 65.15 | 29.86 |
| TraesCS3A01G102500.1 | Wheat | nucleus | 65.15 | 29.86 |
| TraesCS6A01G034500.1 | Wheat | nucleus | 65.15 | 29.86 |
| TraesCS6A01G035000.1 | Wheat | nucleus | 65.15 | 29.86 |
| TraesCS6B01G048800.1 | Wheat | nucleus | 65.15 | 29.86 |
| TraesCS6B01G049100.1 | Wheat | nucleus | 65.15 | 29.86 |
| TraesCS6B01G049300.1 | Wheat | nucleus | 65.15 | 29.86 |
| TraesCS6B01G082600.1 | Wheat | nucleus | 65.15 | 29.86 |
| CDY15776 | Canola | nucleus | 66.67 | 29.73 |
| TraesCS1B01G294500.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G169300.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G169400.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G169500.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G169700.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G169800.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G169900.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G170400.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G170500.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G170600.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G170700.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G170900.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G171000.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCSU01G171100.1 | Wheat | nucleus | 66.67 | 29.73 |
| TraesCS6D01G040200.1 | Wheat | nucleus | 65.15 | 29.66 |
| HORVU7Hr1G110190.1 | Barley | nucleus | 59.09 | 29.55 |
| CDY71843 | Canola | nucleus | 66.67 | 29.53 |
| EES00304 | Sorghum | nucleus | 66.67 | 29.53 |
| EES00305 | Sorghum | nucleus | 66.67 | 29.53 |
| Zm00001d039821_P001 | Maize | plastid | 66.67 | 29.53 |
| Os01t0153100-00 | Rice | nucleus | 68.18 | 29.41 |
| EES00399 | Sorghum | nucleus | 66.67 | 29.33 |
| HORVU6Hr1G087190.1 | Barley | nucleus | 66.67 | 29.33 |
| Zm00001d011236_P001 | Maize | plastid | 66.67 | 29.33 |
| Zm00001d032070_P001 | Maize | plastid | 66.67 | 29.33 |
| Zm00001d050100_P001 | Maize | plastid | 66.67 | 29.33 |
| EES18353 | Sorghum | nucleus | 65.15 | 29.25 |
| CDX95762 | Canola | nucleus | 66.67 | 29.14 |
| EER97675 | Sorghum | nucleus | 66.67 | 29.14 |
| EES15092 | Sorghum | nucleus | 66.67 | 29.14 |
| TraesCS3A01G088800.1 | Wheat | nucleus | 66.67 | 29.14 |
| Zm00001d020580_P001 | Maize | plastid | 66.67 | 29.14 |
| OQU92807 | Sorghum | nucleus | 65.15 | 29.05 |
| Zm00001d044247_P001 | Maize | plastid | 65.15 | 29.05 |
| EES15460 | Sorghum | nucleus | 66.67 | 28.95 |
| GSMUA_Achr7P15260_001 | Banana | nucleus | 66.67 | 28.95 |
| TraesCS1B01G244900.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS1B01G245300.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS1D01G233300.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS2D01G310800.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS3D01G088900.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS4A01G260400.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS4B01G054200.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS4D01G054200.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS5A01G384300.1 | Wheat | nucleus | 66.67 | 28.95 |
| TraesCS5B01G389100.1 | Wheat | nucleus | 66.67 | 28.95 |
| Zm00001d007084_P001 | Maize | plastid | 66.67 | 28.95 |
| TraesCS4A01G099900.1 | Wheat | nucleus | 65.15 | 28.86 |
| TraesCS4B01G204400.1 | Wheat | nucleus | 65.15 | 28.86 |
| TraesCS7D01G485700.1 | Wheat | nucleus | 60.61 | 28.78 |
| CDY72471 | Canola | nucleus | 66.67 | 28.76 |
| EER96770 | Sorghum | nucleus | 66.67 | 28.76 |
| HORVU1Hr1G049920.1 | Barley | nucleus | 66.67 | 28.76 |
| OQU87075 | Sorghum | nucleus | 66.67 | 28.76 |
| TraesCS1B01G192500.1 | Wheat | nucleus | 66.67 | 28.76 |
| TraesCS1D01G396600.1 | Wheat | golgi, nucleus, unclear | 65.15 | 28.67 |
| Zm00001d025913_P001 | Maize | plastid | 65.15 | 28.67 |
| CDX77199 | Canola | nucleus | 66.67 | 28.57 |
| TraesCS4A01G030400.1 | Wheat | nucleus | 66.67 | 28.57 |
| TraesCS4B01G275400.1 | Wheat | nucleus | 66.67 | 28.57 |
| Zm00001d051591_P001 | Maize | plastid | 66.67 | 28.57 |
| TraesCS1B01G416600.1 | Wheat | nucleus | 65.15 | 28.48 |
| CDX92329 | Canola | nucleus | 62.12 | 28.47 |
| CDX83300 | Canola | nucleus | 66.67 | 28.39 |
| EES07386 | Sorghum | nucleus | 66.67 | 28.39 |
| Os03t0279000-00 | Rice | nucleus | 65.15 | 28.29 |
| Os05t0574300-00 | Rice | nucleus | 65.15 | 28.29 |
| TraesCS1A01G228700.1 | Wheat | nucleus | 65.15 | 28.29 |
| TraesCS6B01G376900.1 | Wheat | nucleus | 65.15 | 28.29 |
| TraesCS5A01G051900.1 | Wheat | nucleus | 66.67 | 28.21 |
| Os01t0149600-01 | Rice | nucleus | 65.15 | 28.1 |
| Os01t0152300-00 | Rice | nucleus | 65.15 | 28.1 |
| Os01t0152900-00 | Rice | nucleus | 65.15 | 28.1 |
| TraesCS1A01G361600.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1A01G367900.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1A01G368000.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1A01G388600.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1B01G378300.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1B01G386200.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1B01G386400.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1B01G386700.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1D01G366300.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1D01G373800.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS1D01G373900.1 | Wheat | nucleus | 65.15 | 28.1 |
| TraesCS5D01G020000.1 | Wheat | nucleus | 66.67 | 28.03 |
| TraesCS6B01G084900.1 | Wheat | nucleus | 65.15 | 27.92 |
| TraesCS6D01G326800.1 | Wheat | nucleus, unclear | 65.15 | 27.92 |
| HORVU6Hr1G005950.2 | Barley | nucleus | 65.15 | 27.74 |
| Os01t0153300-00 | Rice | nucleus | 65.15 | 27.74 |
| TraesCS5B01G058200.1 | Wheat | nucleus | 66.67 | 27.67 |
| TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 66.67 | 27.67 |
| Zm00001d005789_P001 | Maize | plastid | 63.64 | 27.63 |
| TraesCS1B01G386500.1 | Wheat | nucleus | 63.64 | 27.45 |
| TraesCS1B01G386600.1 | Wheat | nucleus | 63.64 | 27.45 |
| TraesCS1D01G194600.1 | Wheat | nucleus | 63.64 | 27.45 |
| TraesCSU01G081100.1 | Wheat | nucleus | 63.64 | 27.27 |
| HORVU6Hr1G008320.1 | Barley | nucleus | 63.64 | 26.75 |
| TraesCS1D01G232900.1 | Wheat | nucleus | 63.64 | 26.75 |
| HORVU1Hr1G091370.1 | Barley | nucleus | 63.64 | 26.42 |
| HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 65.15 | 26.38 |
| HORVU4Hr1G070240.1 | Barley | nucleus | 65.15 | 25.9 |
| HORVU7Hr1G110170.1 | Barley | nucleus | 63.64 | 25.77 |
| HORVU3Hr1G013530.1 | Barley | nucleus | 63.64 | 25.61 |
| HORVU4Hr1G009040.2 | Barley | nucleus | 66.67 | 25.58 |
| HORVU1Hr1G072190.4 | Barley | nucleus | 66.67 | 25.0 |
| HORVU3Hr1G013680.1 | Barley | nucleus | 63.64 | 24.71 |
| HORVU2Hr1G077630.1 | Barley | nucleus | 66.67 | 24.31 |
| HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 63.64 | 24.28 |
| HORVU1Hr1G058500.1 | Barley | nucleus | 66.67 | 24.04 |
| HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 66.67 | 24.04 |
| HORVU1Hr1G078480.6 | Barley | nucleus | 65.15 | 23.89 |
| HORVU1Hr1G078530.3 | Barley | nucleus | 65.15 | 23.89 |
| TraesCS5D01G393900.1 | Wheat | nucleus | 59.09 | 23.78 |
| HORVU1Hr1G085540.1 | Barley | nucleus | 63.64 | 23.46 |
| HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 65.15 | 23.37 |
| HORVU6Hr1G083110.1 | Barley | nucleus | 59.09 | 22.81 |
| HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 68.18 | 21.33 |
| GSMUA_Achr6P33320_001 | Banana | nucleus | 66.67 | 21.26 |
| HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 68.18 | 21.23 |
| HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 66.67 | 21.05 |
| Os08t0490900-00 | Rice | nucleus | 66.67 | 20.75 |
| HORVU7Hr1G110290.1 | Barley | nucleus | 30.3 | 19.61 |
| Zm00001d048491_P001 | Maize | plastid | 66.67 | 18.49 |
| HORVU1Hr1G066130.1 | Barley | nucleus | 66.67 | 18.11 |
| HORVU3Hr1G086610.2 | Barley | nucleus | 56.06 | 17.62 |
| TraesCS6B01G081700.1 | Wheat | nucleus | 39.39 | 15.85 |
| TraesCS6D01G063200.1 | Wheat | nucleus | 40.91 | 13.64 |
| TraesCS6A01G061400.1 | Wheat | nucleus | 39.39 | 12.44 |
| CDX93584 | Canola | nucleus | 39.39 | 10.12 |
| CDX95087 | Canola | nucleus | 39.39 | 8.15 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.3 | GO:A0A078C2E3 | EnsemblPlants:CDX71015 | ProteinID:CDX71015 | ProteinID:CDX71015.1 |
| GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0046982 | EnsemblPlantsGene:GSBRNA2T00140950001 | InterPro:Histone-fold |
| InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 | PFAM:PF00125 | PRINTS:PR00621 | ScanProsite:PS00357 |
| PANTHER:PTHR23428 | PANTHER:PTHR23428:SF106 | SMART:SM00427 | SUPFAM:SSF47113 | UniParc:UPI0004EF3375 | : |
Description
BnaC03g10990D
Coordinates
chrLK031791:-:3234709..3234996
Molecular Weight (calculated)
7338.9 Da
IEP (calculated)
10.710
GRAVY (calculated)
-0.309
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MGIMNSFIND IFEKLARESS KLARYNKKPT ITSREIQTAV RLVLPGELAK HAVSEGTKAV TKFTNS
001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
Arabidopsis Description
HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.