Factsheet for HORVU7Hr1G110330.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G110130.1	Barley	nucleus	89.08	89.83
HORVU6Hr1G006110.1	Barley	nucleus, plastid	70.59	71.79
Os05t0460475-00	Rice	nucleus	60.5	67.92
GSMUA_Achr9P04060_001	Banana	nucleus	65.55	66.67
HORVU6Hr1G015790.1	Barley	nucleus	73.11	64.44
KRH26542	Soybean	nucleus	70.59	62.69
KRH22818	Soybean	nucleus	69.75	62.41
HORVU0Hr1G006420.1	Barley	nucleus	72.27	62.32
HORVU3Hr1G034060.1	Barley	nucleus	72.27	62.32
KRG95819	Soybean	nucleus	72.27	62.32
KRH67549	Soybean	nucleus	72.27	62.32
CDX71015	Canola	nucleus	34.45	62.12
Bra007018.1-P	Field mustard	nucleus	71.43	61.59
KRH19721	Soybean	nucleus	71.43	61.15
KRG92106	Soybean	nucleus	69.75	61.03
Bra006685.1-P	Field mustard	nucleus	72.27	60.99
AT2G37470.1	Thale cress	nucleus	70.59	60.87
Bra039810.1-P	Field mustard	nucleus	70.59	60.87
KRH34681	Soybean	nucleus	69.75	60.58
Solyc02g038690.1.1	Tomato	nucleus	68.07	60.45
Bra002436.1-P	Field mustard	nucleus	71.43	60.28
PGSC0003DMT400043578	Potato	nucleus	71.43	60.28
Solyc03g071620.1.1	Tomato	nucleus	71.43	60.28
AT3G53650.1	Thale cress	nucleus	69.75	60.14
Bra003150.1-P	Field mustard	nucleus	69.75	60.14
Bra038267.1-P	Field mustard	nucleus	68.91	59.85
AT5G02570.1	Thale cress	nucleus	66.39	59.85
EES00304	Sorghum	nucleus	74.79	59.73
Zm00001d039821_P001	Maize	plastid	74.79	59.73
HORVU7Hr1G110190.1	Barley	nucleus	65.55	59.09
EES00305	Sorghum	nucleus	73.95	59.06
PGSC0003DMT400070382	Potato	nucleus	71.43	59.03
Solyc11g007920.1.1	Tomato	nucleus	71.43	59.03
Solyc12g013510.1.1	Tomato	nucleus	68.91	58.99
GSMUA_Achr2P19080_001	Banana	nucleus	70.59	58.74
KRH29833	Soybean	nucleus	70.59	58.74
AT3G09480.1	Thale cress	nucleus	62.18	58.73
Solyc11g007930.1.1	Tomato	nucleus	68.07	58.7
EES00399	Sorghum	nucleus	73.95	58.67
HORVU6Hr1G087190.1	Barley	nucleus	73.95	58.67
AT3G46030.1	Thale cress	nucleus	71.43	58.62
AT5G22880.1	Thale cress	nucleus	71.43	58.62
VIT_13s0019g05370.t01	Wine grape	nucleus	71.43	58.62
PGSC0003DMT400074994	Potato	nucleus	72.27	58.5
Solyc06g005390.1.1	Tomato	nucleus	72.27	58.5
Bra020275.1-P	Field mustard	nucleus	69.75	58.45
PGSC0003DMT400070383	Potato	nucleus	69.75	58.45
Bra006639.1-P	Field mustard	nucleus	70.59	58.33
PGSC0003DMT400077939	Potato	nucleus	71.43	58.22
Solyc06g075800.1.1	Tomato	nucleus	71.43	58.22
Bra002520.1-P	Field mustard	nucleus	73.11	58.0
EES15460	Sorghum	nucleus	73.95	57.89
PGSC0003DMT400018456	Potato	nucleus	68.91	57.75
Solyc06g074790.1.1	Tomato	nucleus	68.91	57.75
PGSC0003DMT400022074	Potato	nucleus	69.75	57.64
PGSC0003DMT400022099	Potato	nucleus	69.75	57.64
HORVU1Hr1G049920.1	Barley	nucleus	73.95	57.52
AT1G07790.1	Thale cress	nucleus	71.43	57.43
KRH29831	Soybean	nucleus	71.43	57.43
KRH29832	Soybean	nucleus	71.43	57.43
KRH29836	Soybean	nucleus	71.43	57.43
VIT_06s0004g04250.t01	Wine grape	nucleus	71.43	57.43
AT3G45980.1	Thale cress	nucleus	72.27	57.33
PGSC0003DMT400060096	Potato	nucleus	70.59	57.14
Solyc05g055440.1.1	Tomato	nucleus	70.59	57.14
Solyc11g066430.1.1	Tomato	nucleus	67.23	57.14
KRH24830	Soybean	nucleus	71.43	57.05
KRH24831	Soybean	nucleus	71.43	57.05
KRH24833	Soybean	nucleus	71.43	57.05
VIT_06s0004g04230.t01	Wine grape	nucleus	69.75	56.85
AT5G59910.1	Thale cress	nucleus	71.43	56.67
PGSC0003DMT400018455	Potato	nucleus	68.07	56.64
Solyc06g074780.1.1	Tomato	nucleus	68.07	56.64
Bra011930.1-P	Field mustard	nucleus	70.59	56.38
Bra035677.1-P	Field mustard	nucleus	70.59	56.38
PGSC0003DMT400001108	Potato	nucleus	67.23	56.34
AT2G28720.1	Thale cress	nucleus	71.43	56.29
HORVU6Hr1G005950.2	Barley	nucleus	73.11	56.13
HORVU6Hr1G008320.1	Barley	nucleus	73.95	56.05
HORVU1Hr1G091370.1	Barley	nucleus	74.79	55.97
GSMUA_Achr7P15260_001	Banana	nucleus	70.59	55.26
VIT_06s0004g04300.t01	Wine grape	nucleus	70.59	55.26
HORVU3Hr1G013530.1	Barley	nucleus	75.63	54.88
Bra000483.1-P	Field mustard	nucleus	71.43	54.84
PGSC0003DMT400074020	Potato	nucleus	61.34	54.07
HORVU6Hr1G015760.1	Barley	nucleus, plastid	73.95	53.99
HORVU4Hr1G070240.1	Barley	nucleus	73.95	53.01
HORVU7Hr1G110170.1	Barley	nucleus	72.27	52.76
HORVU3Hr1G013680.1	Barley	nucleus	74.79	52.35
HORVU4Hr1G009040.2	Barley	nucleus	74.79	51.74
HORVU6Hr1G083110.1	Barley	nucleus	73.95	51.46
HORVU7Hr1G110290.1	Barley	nucleus	43.7	50.98
HORVU1Hr1G072190.4	Barley	nucleus	74.79	50.57
HORVU1Hr1G078480.6	Barley	nucleus	75.63	50.0
HORVU2Hr1G077630.1	Barley	nucleus	75.63	49.72
HORVU7Hr1G110090.1	Barley	nucleus, plastid	72.27	49.71
HORVU1Hr1G058500.1	Barley	nucleus	75.63	49.18
HORVU4Hr1G073130.1	Barley	nucleus, plastid	75.63	49.18
HORVU1Hr1G078530.3	Barley	nucleus	73.95	48.89
HORVU1Hr1G085540.1	Barley	nucleus	71.43	47.49
HORVU5Hr1G094500.1	Barley	nucleus, plastid	78.99	44.34
HORVU3Hr1G015810.1	Barley	nucleus, plastid	75.63	43.06
HORVU1Hr1G056530.1	Barley	nucleus, plastid	75.63	42.65
HORVU3Hr1G086580.1	Barley	nucleus, plastid	63.03	40.76
Solyc10g044580.1.1	Tomato	nucleus	45.38	40.0
GSMUA_Achr6P33320_001	Banana	nucleus	67.23	38.65
HORVU3Hr1G086610.2	Barley	nucleus	67.23	38.1
Zm00001d048491_P001	Maize	plastid	75.63	37.82
HORVU1Hr1G066130.1	Barley	nucleus	76.47	37.45
VIT_06s0004g04240.t01	Wine grape	nucleus	70.59	36.52
HORVU4Hr1G000750.1	Barley	nucleus	39.5	26.4
PGSC0003DMT400074018	Potato	nucleus	53.78	16.8

Protein Annotations

Gene3D:1.10.20.10	MapMan:12.1.3	UniProt:A0A287XT20	GO:GO:0000786	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0046982	EnsemblPlantsGene:HORVU7Hr1G110330	EnsemblPlants:HORVU7Hr1G110330.2	InterPro:Histone-fold
InterPro:Histone_H2A/H2B/H3	InterPro:Histone_H2B	InterPro:IPR009072	PFAM:PF00125	PRINTS:PR00621	ScanProsite:PS00357
PANTHER:PTHR23428	PANTHER:PTHR23428:SF72	SMART:SM00427	SUPFAM:SSF47113	UniParc:UPI000B484D76	SEG:seg

Description

Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A287XT20]

Coordinates

chrchr7H:-:629663547..629664043

Molecular Weight (calculated)

12829.6 Da

IEP (calculated)

10.756

GRAVY (calculated)

-0.413

Length

119 amino acids

Sequence
(BLAST)

001: LTSPPIFPAK TPPHLSPAKQ QRPMAPKAEK KPVAEKTPAA EKVHPDIGIS SKAMSIMNSF INDIFEKLAG ESAKLARYNK KPTITSREIQ TSVRLVLPGE
101: LAKHAVSEGT KAVTKFTSA

Best Arabidopsis Sequence Match ( AT1G07790.1 )
(BLAST)

001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS

Arabidopsis Description

HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.