Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P20900_001 | Banana | nucleus | 44.93 | 93.94 |
| AT2G37470.1 | Thale cress | nucleus | 91.3 | 91.3 |
| AT5G02570.1 | Thale cress | nucleus | 86.96 | 90.91 |
| GSMUA_Achr10P... | Banana | nucleus | 43.48 | 90.91 |
| KRG95819 | Soybean | nucleus | 90.58 | 90.58 |
| KRH67549 | Soybean | nucleus | 90.58 | 90.58 |
| GSMUA_Achr9P04060_001 | Banana | nucleus | 76.09 | 89.74 |
| KRG92106 | Soybean | nucleus | 88.41 | 89.71 |
| TraesCS6D01G046500.1 | Wheat | nucleus | 42.75 | 89.39 |
| KRH19721 | Soybean | nucleus | 89.86 | 89.21 |
| KRH34681 | Soybean | nucleus | 88.41 | 89.05 |
| AT3G09480.1 | Thale cress | nucleus | 81.16 | 88.89 |
| TraesCS7B01G394800.1 | Wheat | nucleus | 62.32 | 88.66 |
| TraesCS6B01G055300.1 | Wheat | nucleus | 61.59 | 88.54 |
| TraesCS6B01G055500.1 | Wheat | nucleus | 61.59 | 88.54 |
| TraesCS3A01G075800.1 | Wheat | nucleus | 60.87 | 87.5 |
| TraesCS7B01G394500.1 | Wheat | nucleus | 59.42 | 85.42 |
| Solyc11g066430.1.1 | Tomato | nucleus | 86.23 | 85.0 |
| Os05t0460475-00 | Rice | nucleus | 64.49 | 83.96 |
| TraesCS2A01G312400.1 | Wheat | nucleus | 71.74 | 83.9 |
| TraesCS3A01G357500.1 | Wheat | nucleus | 82.61 | 83.82 |
| TraesCS3D01G351300.1 | Wheat | nucleus | 82.61 | 83.82 |
| TraesCS3D01G351400.1 | Wheat | nucleus | 82.61 | 83.82 |
| PGSC0003DMT400001108 | Potato | nucleus | 85.51 | 83.1 |
| TraesCS3B01G390000.1 | Wheat | nucleus | 81.88 | 83.09 |
| TraesCS3B01G390100.1 | Wheat | nucleus | 81.16 | 82.96 |
| Os01t0839500-00 | Rice | nucleus | 83.33 | 82.73 |
| TraesCS3A01G357400.1 | Wheat | nucleus | 82.61 | 82.61 |
| Solyc06g074790.1.1 | Tomato | nucleus | 84.78 | 82.39 |
| TraesCS3D01G099000.1 | Wheat | nucleus | 81.16 | 82.35 |
| TraesCS6A01G040500.1 | Wheat | nucleus | 81.16 | 82.35 |
| TraesCS6D01G046600.1 | Wheat | nucleus | 81.16 | 82.35 |
| HORVU6Hr1G015790.1 | Barley | nucleus | 80.43 | 82.22 |
| TraesCS3B01G114400.1 | Wheat | nucleus | 80.43 | 82.22 |
| TraesCS3B01G114600.1 | Wheat | nucleus | 80.43 | 82.22 |
| AT3G46030.1 | Thale cress | nucleus | 86.23 | 82.07 |
| AT1G07790.1 | Thale cress | nucleus | 87.68 | 81.76 |
| PGSC0003DMT400018456 | Potato | nucleus | 84.06 | 81.69 |
| TraesCS6A01G086400.1 | Wheat | nucleus | 79.71 | 81.48 |
| TraesCS6B01G116000.1 | Wheat | nucleus | 79.71 | 81.48 |
| TraesCSU01G077200.1 | Wheat | nucleus | 79.71 | 81.48 |
| AT5G22880.1 | Thale cress | nucleus | 85.51 | 81.38 |
| GSMUA_Achr2P19080_001 | Banana | nucleus | 84.06 | 81.12 |
| TraesCS6D01G046200.1 | Wheat | nucleus, unclear | 79.71 | 80.88 |
| TraesCS6A01G086200.1 | Wheat | nucleus | 78.99 | 80.74 |
| TraesCSU01G077400.1 | Wheat | nucleus | 78.99 | 80.74 |
| AT5G59910.1 | Thale cress | nucleus | 87.68 | 80.67 |
| TraesCS7A01G491000.1 | Wheat | nucleus | 80.43 | 80.43 |
| TraesCS7B01G394700.1 | Wheat | nucleus | 80.43 | 80.43 |
| EES18353 | Sorghum | nucleus | 85.51 | 80.27 |
| TraesCS3D01G075900.1 | Wheat | nucleus | 78.99 | 80.15 |
| AT2G28720.1 | Thale cress | nucleus | 87.68 | 80.13 |
| AT3G45980.1 | Thale cress | nucleus | 86.96 | 80.0 |
| TraesCS1B01G294500.1 | Wheat | nucleus | 85.51 | 79.73 |
| Solyc06g074780.1.1 | Tomato | nucleus | 82.61 | 79.72 |
| HORVU0Hr1G006420.1 | Barley | nucleus | 79.71 | 79.71 |
| HORVU3Hr1G034060.1 | Barley | nucleus | 79.71 | 79.71 |
| TraesCS3D01G342400.1 | Wheat | nucleus | 79.71 | 79.71 |
| TraesCS7B01G394600.1 | Wheat | nucleus | 79.71 | 79.71 |
| EES03855 | Sorghum | nucleus | 78.99 | 79.56 |
| Zm00001d012423_P001 | Maize | plastid | 78.99 | 79.56 |
| Zm00001d042930_P001 | Maize | plastid | 78.99 | 79.56 |
| TraesCS7B01G405800.1 | Wheat | nucleus | 79.71 | 79.14 |
| PGSC0003DMT400018455 | Potato | nucleus | 81.88 | 79.02 |
| TraesCS7A01G490900.1 | Wheat | nucleus | 78.99 | 78.99 |
| TraesCS7B01G394100.1 | Wheat | nucleus | 78.99 | 78.99 |
| TraesCS7B01G394400.1 | Wheat | nucleus | 78.99 | 78.99 |
| TraesCS3D01G351500.1 | Wheat | nucleus | 70.29 | 78.86 |
| TraesCS6D01G046400.1 | Wheat | nucleus | 79.71 | 78.57 |
| TraesCS6A01G040400.1 | Wheat | nucleus | 78.99 | 78.42 |
| TraesCS6A01G040200.1 | Wheat | nucleus | 78.26 | 78.26 |
| TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 80.43 | 78.17 |
| TraesCS7B01G394900.1 | Wheat | nucleus | 80.43 | 78.17 |
| TraesCS7D01G477300.1 | Wheat | nucleus | 80.43 | 78.17 |
| OQU92807 | Sorghum | nucleus | 83.33 | 77.7 |
| TraesCS7D01G477400.1 | Wheat | nucleus | 79.71 | 77.46 |
| EES00304 | Sorghum | nucleus | 83.33 | 77.18 |
| TraesCS1A01G190400.1 | Wheat | nucleus | 78.26 | 77.14 |
| TraesCS1B01G357600.1 | Wheat | nucleus | 80.43 | 77.08 |
| TraesCS7D01G485700.1 | Wheat | nucleus | 77.54 | 76.98 |
| EES00399 | Sorghum | nucleus | 83.33 | 76.67 |
| Zm00001d011236_P001 | Maize | plastid | 83.33 | 76.67 |
| EES00305 | Sorghum | nucleus | 82.61 | 76.51 |
| Zm00001d039821_P001 | Maize | plastid | 82.61 | 76.51 |
| TraesCS3A01G102500.1 | Wheat | nucleus | 79.71 | 76.39 |
| TraesCS6A01G034500.1 | Wheat | nucleus | 79.71 | 76.39 |
| TraesCS6A01G035000.1 | Wheat | nucleus | 79.71 | 76.39 |
| TraesCS6B01G049300.1 | Wheat | nucleus | 79.71 | 76.39 |
| Zm00001d044247_P001 | Maize | plastid | 81.88 | 76.35 |
| EES15460 | Sorghum | nucleus | 84.06 | 76.32 |
| TraesCS2D01G310800.1 | Wheat | nucleus | 84.06 | 76.32 |
| TraesCS4D01G205300.1 | Wheat | nucleus | 78.26 | 76.06 |
| TraesCS4A01G030500.1 | Wheat | nucleus | 77.54 | 75.89 |
| TraesCS6B01G048500.1 | Wheat | unclear | 79.71 | 75.86 |
| EER96770 | Sorghum | nucleus | 84.06 | 75.82 |
| TraesCS6B01G048800.1 | Wheat | nucleus | 78.99 | 75.69 |
| TraesCS6B01G049100.1 | Wheat | nucleus | 78.99 | 75.69 |
| TraesCS6B01G082600.1 | Wheat | nucleus | 78.99 | 75.69 |
| TraesCSU01G169300.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G169400.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G169500.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G169700.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G169800.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G169900.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G170400.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G170500.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G170600.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G170700.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G170900.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G171000.1 | Wheat | nucleus | 81.16 | 75.68 |
| TraesCSU01G171100.1 | Wheat | nucleus | 81.16 | 75.68 |
| Os03t0279000-00 | Rice | nucleus | 83.33 | 75.66 |
| TraesCS5A01G384300.1 | Wheat | nucleus | 83.33 | 75.66 |
| TraesCS5B01G389100.1 | Wheat | nucleus | 83.33 | 75.66 |
| Zm00001d050100_P001 | Maize | plastid | 81.88 | 75.33 |
| TraesCS6D01G040200.1 | Wheat | nucleus | 78.99 | 75.17 |
| TraesCS6D01G040600.1 | Wheat | nucleus | 78.99 | 75.17 |
| Os01t0153100-00 | Rice | nucleus | 83.33 | 75.16 |
| GSMUA_Achr7P15260_001 | Banana | nucleus | 82.61 | 75.0 |
| TraesCS3D01G088900.1 | Wheat | nucleus | 82.61 | 75.0 |
| Zm00001d005789_P001 | Maize | plastid | 82.61 | 75.0 |
| Zm00001d007084_P001 | Maize | plastid | 82.61 | 75.0 |
| TraesCS3A01G088800.1 | Wheat | nucleus | 81.88 | 74.83 |
| Zm00001d020580_P001 | Maize | plastid | 81.88 | 74.83 |
| HORVU6Hr1G087190.1 | Barley | nucleus | 81.16 | 74.67 |
| TraesCS1D01G396600.1 | Wheat | golgi, nucleus, unclear | 81.16 | 74.67 |
| Zm00001d025913_P001 | Maize | plastid | 81.16 | 74.67 |
| Zm00001d032070_P001 | Maize | plastid | 81.16 | 74.67 |
| TraesCS3B01G390300.1 | Wheat | nucleus | 72.46 | 74.63 |
| OQU87075 | Sorghum | nucleus | 82.61 | 74.51 |
| Os01t0149600-01 | Rice | nucleus | 82.61 | 74.51 |
| Os01t0152900-00 | Rice | nucleus | 82.61 | 74.51 |
| TraesCS1B01G192500.1 | Wheat | nucleus | 82.61 | 74.51 |
| TraesCS4A01G099900.1 | Wheat | nucleus | 80.43 | 74.5 |
| Os05t0574300-00 | Rice | nucleus | 81.88 | 74.34 |
| TraesCS1B01G244900.1 | Wheat | nucleus | 81.88 | 74.34 |
| TraesCS1B01G245300.1 | Wheat | nucleus | 81.88 | 74.34 |
| TraesCS4A01G260400.1 | Wheat | nucleus | 81.88 | 74.34 |
| TraesCS4B01G054200.1 | Wheat | nucleus | 81.88 | 74.34 |
| TraesCS4D01G054200.1 | Wheat | nucleus | 81.88 | 74.34 |
| EES07386 | Sorghum | nucleus | 83.33 | 74.19 |
| EER97675 | Sorghum | nucleus | 81.16 | 74.17 |
| EES15092 | Sorghum | nucleus | 81.16 | 74.17 |
| HORVU1Hr1G049920.1 | Barley | nucleus | 81.88 | 73.86 |
| TraesCS4B01G204400.1 | Wheat | nucleus | 79.71 | 73.83 |
| TraesCS1A01G228700.1 | Wheat | nucleus | 81.16 | 73.68 |
| TraesCS1D01G233300.1 | Wheat | nucleus | 81.16 | 73.68 |
| HORVU7Hr1G110290.1 | Barley | nucleus | 54.35 | 73.53 |
| TraesCS1B01G416600.1 | Wheat | nucleus | 80.43 | 73.51 |
| TraesCS4B01G275400.1 | Wheat | nucleus | 81.88 | 73.38 |
| Zm00001d051591_P001 | Maize | plastid | 81.88 | 73.38 |
| TraesCS5D01G020000.1 | Wheat | nucleus | 83.33 | 73.25 |
| Os01t0152300-00 | Rice | nucleus | 81.16 | 73.2 |
| Os01t0153300-00 | Rice | nucleus | 81.88 | 72.9 |
| TraesCS4A01G030400.1 | Wheat | nucleus | 81.16 | 72.73 |
| TraesCS1A01G388600.1 | Wheat | nucleus | 80.43 | 72.55 |
| HORVU6Hr1G005950.2 | Barley | nucleus | 81.16 | 72.26 |
| TraesCS1A01G361600.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS1A01G367900.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS1A01G368000.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS1B01G386200.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS1B01G386400.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS1B01G386700.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS1D01G366300.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS1D01G373800.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS1D01G373900.1 | Wheat | nucleus | 79.71 | 71.9 |
| TraesCS5A01G051900.1 | Wheat | nucleus | 81.16 | 71.79 |
| TraesCS6B01G376900.1 | Wheat | nucleus | 78.99 | 71.71 |
| TraesCS5B01G058200.1 | Wheat | nucleus | 82.61 | 71.7 |
| TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 82.61 | 71.7 |
| TraesCS1B01G378300.1 | Wheat | nucleus | 78.99 | 71.24 |
| TraesCS1B01G386500.1 | Wheat | nucleus | 78.99 | 71.24 |
| TraesCS1B01G386600.1 | Wheat | nucleus | 78.99 | 71.24 |
| TraesCS1D01G194600.1 | Wheat | nucleus | 78.99 | 71.24 |
| HORVU7Hr1G110130.1 | Barley | nucleus | 60.87 | 71.19 |
| TraesCS6B01G084900.1 | Wheat | nucleus | 78.99 | 70.78 |
| TraesCS6D01G326800.1 | Wheat | nucleus, unclear | 78.99 | 70.78 |
| TraesCSU01G081100.1 | Wheat | nucleus | 78.26 | 70.13 |
| HORVU6Hr1G008320.1 | Barley | nucleus | 79.71 | 70.06 |
| HORVU7Hr1G110330.2 | Barley | nucleus | 60.14 | 69.75 |
| TraesCS1D01G232900.1 | Wheat | nucleus | 78.99 | 69.43 |
| HORVU1Hr1G091370.1 | Barley | nucleus | 78.99 | 68.55 |
| HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 80.43 | 68.1 |
| HORVU7Hr1G110170.1 | Barley | nucleus | 79.71 | 67.48 |
| HORVU7Hr1G110190.1 | Barley | nucleus | 64.49 | 67.42 |
| HORVU1Hr1G072190.4 | Barley | nucleus | 85.51 | 67.05 |
| HORVU4Hr1G070240.1 | Barley | nucleus | 80.43 | 66.87 |
| HORVU3Hr1G013530.1 | Barley | nucleus | 78.99 | 66.46 |
| TraesCS5D01G393900.1 | Wheat | nucleus | 78.26 | 65.85 |
| HORVU4Hr1G009040.2 | Barley | nucleus | 81.16 | 65.12 |
| HORVU3Hr1G013680.1 | Barley | nucleus | 79.71 | 64.71 |
| HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 54.35 | 64.1 |
| HORVU2Hr1G077630.1 | Barley | nucleus | 84.06 | 64.09 |
| HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 79.71 | 63.58 |
| HORVU1Hr1G058500.1 | Barley | nucleus | 82.61 | 62.3 |
| HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 81.88 | 61.75 |
| HORVU1Hr1G078480.6 | Barley | nucleus | 79.71 | 61.11 |
| HORVU1Hr1G078530.3 | Barley | nucleus | 79.71 | 61.11 |
| HORVU1Hr1G085540.1 | Barley | nucleus | 78.99 | 60.89 |
| HORVU6Hr1G083110.1 | Barley | nucleus | 73.91 | 59.65 |
| HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 82.61 | 54.55 |
| HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 71.74 | 53.8 |
| HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 82.61 | 53.77 |
| HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 81.88 | 53.55 |
| Os08t0490900-00 | Rice | nucleus | 81.16 | 52.83 |
| GSMUA_Achr6P33320_001 | Banana | nucleus | 75.36 | 50.24 |
| HORVU3Hr1G086610.2 | Barley | nucleus | 76.09 | 50.0 |
| Zm00001d048491_P001 | Maize | plastid | 83.33 | 48.32 |
| HORVU1Hr1G066130.1 | Barley | nucleus | 84.06 | 47.74 |
| TraesCS6B01G081700.1 | Wheat | nucleus | 55.07 | 46.34 |
| TraesCS6D01G063200.1 | Wheat | nucleus | 55.07 | 38.38 |
| TraesCS6A01G061400.1 | Wheat | nucleus | 55.07 | 36.36 |
| AT1G08170.1 | Thale cress | nucleus | 50.0 | 28.4 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.3 | EntrezGene:28719403 | EntrezGene:831878 | UniProt:A0A178VGH6 | ProteinID:AED90491.1 |
| ProteinID:AEE79123.1 | ArrayExpress:AT3G53650 | EnsemblPlantsGene:AT3G53650 | RefSeq:AT3G53650 | TAIR:AT3G53650 | RefSeq:AT3G53650-TAIR-G |
| EnsemblPlants:AT3G53650.1 | TAIR:AT3G53650.1 | ProteinID:CAB67672.1 | ProteinID:CAB85994.1 | GO:GO:0000786 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0005730 | GO:GO:0046982 | InterPro:Histone-fold |
| InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 | RefSeq:NP_001319739.1 | RefSeq:NP_195877.1 | ProteinID:OAP04123.1 |
| PFAM:PF00125 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00621 | ScanProsite:PS00357 | PANTHER:PTHR23428 | PANTHER:PTHR23428:SF106 | UniProt:Q9LFF6 | SMART:SM00427 |
| SUPFAM:SSF47113 | UniParc:UPI00000A8B0C | SEG:seg | : | : | : |
Description
Histone H2B.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFF6]
Coordinates
chr3:+:19889297..19890251
Molecular Weight (calculated)
15225.7 Da
IEP (calculated)
10.825
GRAVY (calculated)
-0.710
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKAAEKKP AGKKPAEKAP AEKLPKAEKK ITKEGGSEKK KKKSKKNIET YKIYIFKVLK QVHPDIGISG KAMGIMNSFI NDIFEKLAQE SSRLARYNKK
101: PTITSREIQT AVRLVLPGEL SKHAVSEGTK AVTKFTSS
101: PTITSREIQT AVRLVLPGEL SKHAVSEGTK AVTKFTSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.