Skip to main content
crop-pal logo
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • vacuole 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g066430.1.1 Tomato nucleus 96.48 97.86
GSMUA_Achr8P20900_001 Banana nucleus 43.66 93.94
CDX86049 Canola nucleus 85.92 92.42
PGSC0003DMT400018456 Potato nucleus 91.55 91.55
GSMUA_Achr10P... Banana nucleus 42.25 90.91
Bra038267.1-P Field mustard nucleus 86.62 89.78
CDX99134 Canola nucleus 86.62 89.78
TraesCS6D01G046500.1 Wheat nucleus 41.55 89.39
CDY30852 Canola nucleus 85.92 88.41
PGSC0003DMT400018455 Potato nucleus 88.73 88.11
PGSC0003DMT400043578 Potato nucleus 87.32 87.94
Bra007018.1-P Field mustard nucleus 85.21 87.68
Bra039810.1-P Field mustard nucleus 85.21 87.68
KRG95819 Soybean nucleus 85.21 87.68
KRH67549 Soybean nucleus 85.21 87.68
KRG92106 Soybean nucleus 83.8 87.5
TraesCS6B01G055300.1 Wheat nucleus 59.15 87.5
TraesCS6B01G055500.1 Wheat nucleus 59.15 87.5
PGSC0003DMT400070383 Potato nucleus 87.32 87.32
GSMUA_Achr9P04060_001 Banana nucleus 71.83 87.18
PGSC0003DMT400077939 Potato nucleus 89.44 86.99
CDY52745 Canola nucleus 83.8 86.86
KRH34681 Soybean nucleus 83.8 86.86
TraesCS3A01G357500.1 Wheat nucleus 83.1 86.76
TraesCS3D01G351300.1 Wheat nucleus 83.1 86.76
TraesCS3D01G351400.1 Wheat nucleus 83.1 86.76
TraesCS3A01G075800.1 Wheat nucleus 58.45 86.46
PGSC0003DMT400060096 Potato nucleus 89.44 86.39
AT5G02570.1 Thale cress nucleus 80.28 86.36
KRH19721 Soybean nucleus 84.51 86.33
AT2G37470.1 Thale cress nucleus 83.8 86.23
Bra003150.1-P Field mustard nucleus 83.8 86.23
PGSC0003DMT400022074 Potato nucleus 87.32 86.11
PGSC0003DMT400022099 Potato nucleus 87.32 86.11
PGSC0003DMT400070382 Potato nucleus 87.32 86.11
TraesCS3B01G390000.1 Wheat nucleus 82.39 86.03
TraesCS3B01G390100.1 Wheat nucleus 81.69 85.93
Os05t0460475-00 Rice nucleus 64.08 85.85
AT3G53650.1 Thale cress nucleus 83.1 85.51
TraesCS3A01G357400.1 Wheat nucleus 83.1 85.51
Os01t0839500-00 Rice nucleus 83.1 84.89
TraesCS2A01G312400.1 Wheat nucleus 70.42 84.75
TraesCS7B01G394800.1 Wheat nucleus 57.75 84.54
AT3G09480.1 Thale cress nucleus 74.65 84.13
HORVU6Hr1G015790.1 Barley nucleus 79.58 83.7
PGSC0003DMT400074994 Potato nucleus 85.92 82.99
TraesCS6A01G086200.1 Wheat nucleus 78.87 82.96
TraesCS6A01G086400.1 Wheat nucleus 78.87 82.96
TraesCS6B01G116000.1 Wheat nucleus 78.87 82.96
TraesCSU01G077200.1 Wheat nucleus 78.87 82.96
Zm00001d042930_P001 Maize plastid 79.58 82.48
TraesCS3D01G099000.1 Wheat nucleus 78.87 82.35
TraesCS7B01G394500.1 Wheat nucleus 55.63 82.29
TraesCS3B01G114600.1 Wheat nucleus 78.17 82.22
TraesCSU01G077400.1 Wheat nucleus 78.17 82.22
EES03855 Sorghum nucleus 78.87 81.75
Zm00001d012423_P001 Maize plastid 78.87 81.75
TraesCS3D01G075900.1 Wheat nucleus 78.17 81.62
GSMUA_Achr2P19080_001 Banana nucleus 81.69 81.12
TraesCS1B01G294500.1 Wheat nucleus 84.51 81.08
TraesCS6D01G046200.1 Wheat nucleus, unclear 77.46 80.88
TraesCS7B01G405800.1 Wheat nucleus 78.87 80.58
TraesCS3D01G351500.1 Wheat nucleus 69.72 80.49
TraesCS6D01G046600.1 Wheat nucleus 76.76 80.15
TraesCS3B01G114400.1 Wheat nucleus 76.06 80.0
TraesCS4D01G205300.1 Wheat nucleus 79.58 79.58
TraesCS7A01G491100.1 Wheat extracellular, nucleus, unclear 79.58 79.58
TraesCS7B01G394900.1 Wheat nucleus 79.58 79.58
TraesCS7D01G477300.1 Wheat nucleus 79.58 79.58
TraesCS7A01G491000.1 Wheat nucleus 76.76 78.99
TraesCS7B01G394700.1 Wheat nucleus 76.76 78.99
TraesCS7D01G477400.1 Wheat nucleus 78.87 78.87
TraesCS6A01G040500.1 Wheat nucleus 75.35 78.68
Zm00001d039821_P001 Maize plastid 82.39 78.52
HORVU0Hr1G006420.1 Barley nucleus 76.06 78.26
HORVU3Hr1G034060.1 Barley nucleus 76.06 78.26
TraesCS3D01G342400.1 Wheat nucleus 76.06 78.26
TraesCS7B01G394600.1 Wheat nucleus 76.06 78.26
EES18353 Sorghum nucleus 80.99 78.23
TraesCS1A01G190400.1 Wheat nucleus 76.76 77.86
EES00304 Sorghum nucleus 81.69 77.85
OQU92807 Sorghum nucleus 80.99 77.7
Zm00001d044247_P001 Maize plastid 80.99 77.7
TraesCS7D01G485700.1 Wheat nucleus 76.06 77.7
Os03t0279000-00 Rice nucleus 83.1 77.63
TraesCS7A01G490900.1 Wheat nucleus 75.35 77.54
TraesCS7B01G394100.1 Wheat nucleus 75.35 77.54
TraesCS7B01G394400.1 Wheat nucleus 75.35 77.54
EES00399 Sorghum nucleus 81.69 77.33
EES00305 Sorghum nucleus 80.99 77.18
TraesCS3B01G390300.1 Wheat nucleus 72.54 76.87
TraesCS6A01G040200.1 Wheat nucleus 74.65 76.81
TraesCS4A01G030500.1 Wheat nucleus 76.06 76.6
HORVU7Hr1G110290.1 Barley nucleus 54.93 76.47
TraesCS6D01G046400.1 Wheat nucleus 75.35 76.43
TraesCSU01G169300.1 Wheat nucleus 79.58 76.35
TraesCSU01G169400.1 Wheat nucleus 79.58 76.35
TraesCSU01G169500.1 Wheat nucleus 79.58 76.35
TraesCSU01G169700.1 Wheat nucleus 79.58 76.35
TraesCSU01G169800.1 Wheat nucleus 79.58 76.35
TraesCSU01G169900.1 Wheat nucleus 79.58 76.35
TraesCSU01G170400.1 Wheat nucleus 79.58 76.35
TraesCSU01G170500.1 Wheat nucleus 79.58 76.35
TraesCSU01G170600.1 Wheat nucleus 79.58 76.35
TraesCSU01G170700.1 Wheat nucleus 79.58 76.35
TraesCSU01G170900.1 Wheat nucleus 79.58 76.35
TraesCSU01G171000.1 Wheat nucleus 79.58 76.35
TraesCSU01G171100.1 Wheat nucleus 79.58 76.35
TraesCS5A01G384300.1 Wheat nucleus 81.69 76.32
TraesCS5B01G389100.1 Wheat nucleus 81.69 76.32
TraesCS6A01G040400.1 Wheat nucleus 74.65 76.26
HORVU6Hr1G087190.1 Barley nucleus 80.28 76.0
Zm00001d011236_P001 Maize plastid 80.28 76.0
TraesCS4A01G099900.1 Wheat nucleus 79.58 75.84
TraesCS4B01G204400.1 Wheat nucleus 79.58 75.84
EER96770 Sorghum nucleus 81.69 75.82
OQU87075 Sorghum nucleus 81.69 75.82
EES15460 Sorghum nucleus 80.99 75.66
TraesCS2D01G310800.1 Wheat nucleus 80.99 75.66
TraesCS3D01G088900.1 Wheat nucleus 80.99 75.66
TraesCS4A01G260400.1 Wheat nucleus 80.99 75.66
TraesCS4D01G054200.1 Wheat nucleus 80.99 75.66
Zm00001d007084_P001 Maize plastid 80.99 75.66
Zm00001d020580_P001 Maize plastid 80.28 75.5
Zm00001d032070_P001 Maize plastid 79.58 75.33
Os01t0153100-00 Rice nucleus 80.99 75.16
TraesCS4B01G054200.1 Wheat nucleus 80.28 75.0
TraesCS3A01G088800.1 Wheat nucleus 79.58 74.83
Zm00001d050100_P001 Maize plastid 78.87 74.67
TraesCS5D01G020000.1 Wheat nucleus 82.39 74.52
Os01t0149600-01 Rice nucleus 80.28 74.51
Os01t0152900-00 Rice nucleus 80.28 74.51
TraesCS6B01G048500.1 Wheat unclear 76.06 74.48
GSMUA_Achr7P15260_001 Banana nucleus 79.58 74.34
Os05t0574300-00 Rice nucleus 79.58 74.34
Zm00001d005789_P001 Maize plastid 79.58 74.34
TraesCS1B01G357600.1 Wheat nucleus 75.35 74.31
TraesCS6A01G034500.1 Wheat nucleus 75.35 74.31
TraesCS6A01G035000.1 Wheat nucleus 75.35 74.31
TraesCS6B01G048800.1 Wheat nucleus 75.35 74.31
TraesCS6B01G049100.1 Wheat nucleus 75.35 74.31
EER97675 Sorghum nucleus 78.87 74.17
EES15092 Sorghum nucleus 78.87 74.17
Zm00001d051591_P001 Maize plastid 80.28 74.03
Zm00001d025913_P001 Maize plastid 78.17 74.0
HORVU1Hr1G049920.1 Barley nucleus 79.58 73.86
Os01t0152300-00 Rice nucleus 79.58 73.86
TraesCS1B01G244900.1 Wheat nucleus 78.87 73.68
TraesCS1B01G245300.1 Wheat nucleus 78.87 73.68
TraesCS3A01G102500.1 Wheat nucleus 74.65 73.61
TraesCS6B01G049300.1 Wheat nucleus 74.65 73.61
TraesCS6B01G082600.1 Wheat nucleus 74.65 73.61
EES07386 Sorghum nucleus 80.28 73.55
TraesCS1D01G396600.1 Wheat golgi, nucleus, unclear 77.46 73.33
TraesCS1B01G192500.1 Wheat nucleus 78.87 73.2
TraesCS6D01G040600.1 Wheat nucleus 74.65 73.1
TraesCS1A01G228700.1 Wheat nucleus 78.17 73.03
TraesCS1D01G233300.1 Wheat nucleus 78.17 73.03
Os01t0153300-00 Rice nucleus 79.58 72.9
TraesCS1B01G416600.1 Wheat nucleus 77.46 72.85
TraesCS4A01G030400.1 Wheat nucleus 78.87 72.73
TraesCS4B01G275400.1 Wheat nucleus 78.87 72.73
PGSC0003DMT400074020 Potato nucleus 69.01 72.59
TraesCS6D01G040200.1 Wheat nucleus 73.94 72.41
HORVU6Hr1G005950.2 Barley nucleus 78.87 72.26
TraesCS1A01G361600.1 Wheat nucleus 76.76 71.24
TraesCS1A01G367900.1 Wheat nucleus 76.76 71.24
TraesCS1A01G368000.1 Wheat nucleus 76.76 71.24
TraesCS1A01G388600.1 Wheat nucleus 76.76 71.24
TraesCS1B01G378300.1 Wheat nucleus 76.76 71.24
TraesCS1B01G386200.1 Wheat nucleus 76.76 71.24
TraesCS1B01G386400.1 Wheat nucleus 76.76 71.24
TraesCS1B01G386700.1 Wheat nucleus 76.76 71.24
TraesCS1D01G366300.1 Wheat nucleus 76.76 71.24
TraesCS1D01G373800.1 Wheat nucleus 76.76 71.24
TraesCS1D01G373900.1 Wheat nucleus 76.76 71.24
TraesCS5A01G051900.1 Wheat nucleus 78.17 71.15
TraesCS5B01G058200.1 Wheat nucleus 79.58 71.07
TraesCS5B01G064900.1 Wheat nucleus, unclear 79.58 71.07
TraesCS6B01G376900.1 Wheat nucleus 76.06 71.05
TraesCS6B01G084900.1 Wheat nucleus 76.76 70.78
TraesCS1B01G386500.1 Wheat nucleus 76.06 70.59
TraesCS1B01G386600.1 Wheat nucleus 76.06 70.59
TraesCS1D01G194600.1 Wheat nucleus 76.06 70.59
HORVU1Hr1G091370.1 Barley nucleus 78.17 69.81
TraesCS6D01G326800.1 Wheat nucleus, unclear 75.35 69.48
HORVU6Hr1G015760.1 Barley nucleus, plastid 79.58 69.33
TraesCSU01G081100.1 Wheat nucleus 74.65 68.83
HORVU6Hr1G008320.1 Barley nucleus 76.06 68.79
TraesCS1D01G232900.1 Wheat nucleus 76.06 68.79
HORVU7Hr1G110130.1 Barley nucleus 57.04 68.64
HORVU1Hr1G072190.4 Barley nucleus 84.51 68.18
HORVU7Hr1G110190.1 Barley nucleus 63.38 68.18
HORVU4Hr1G070240.1 Barley nucleus 79.58 68.07
HORVU3Hr1G013530.1 Barley nucleus 78.17 67.68
HORVU7Hr1G110330.2 Barley nucleus 56.34 67.23
TraesCS5D01G393900.1 Wheat nucleus 76.76 66.46
HORVU4Hr1G009040.2 Barley nucleus 80.28 66.28
HORVU7Hr1G110170.1 Barley nucleus 76.06 66.26
HORVU3Hr1G013680.1 Barley nucleus 78.87 65.88
HORVU2Hr1G077630.1 Barley nucleus 80.99 63.54
HORVU7Hr1G110090.1 Barley nucleus, plastid 76.06 62.43
HORVU6Hr1G006110.1 Barley nucleus, plastid 51.41 62.39
HORVU1Hr1G058500.1 Barley nucleus 79.58 61.75
HORVU4Hr1G073130.1 Barley nucleus, plastid 78.87 61.2
HORVU1Hr1G078480.6 Barley nucleus 77.46 61.11
HORVU1Hr1G078530.3 Barley nucleus 77.46 61.11
HORVU1Hr1G085540.1 Barley nucleus 76.06 60.34
HORVU6Hr1G083110.1 Barley nucleus 69.01 57.31
HORVU3Hr1G015810.1 Barley nucleus, plastid 80.99 55.02
HORVU3Hr1G086580.1 Barley nucleus, plastid 70.42 54.35
HORVU5Hr1G094500.1 Barley nucleus, plastid 80.99 54.25
Os08t0490900-00 Rice nucleus 80.99 54.25
HORVU1Hr1G056530.1 Barley nucleus, plastid 78.87 53.08
HORVU3Hr1G086610.2 Barley nucleus 76.76 51.9
GSMUA_Achr6P33320_001 Banana nucleus 71.13 48.79
Zm00001d048491_P001 Maize plastid 80.99 48.32
HORVU1Hr1G066130.1 Barley nucleus 81.69 47.74
TraesCS6B01G081700.1 Wheat nucleus 50.7 43.9
TraesCS6D01G063200.1 Wheat nucleus 53.52 38.38
TraesCS6A01G061400.1 Wheat nucleus 53.52 36.36
PGSC0003DMT400018366 Potato mitochondrion, nucleus 51.41 26.74
PGSC0003DMT400074018 Potato nucleus 59.15 22.05
Protein Annotations
Gene3D:1.10.20.10EntrezGene:102578986EntrezGene:107057692MapMan:12.1.3GO:GO:0000786GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005694GO:GO:0046982InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3
InterPro:Histone_H2BInterPro:IPR009072UniProt:M0ZHX8PFAM:PF00125EnsemblPlantsGene:PGSC0003DMG400000420PGSC:PGSC0003DMG400000420
EnsemblPlants:PGSC0003DMT400001108PRINTS:PR00621ScanProsite:PS00357PANTHER:PTHR23428PANTHER:PTHR23428:SF106SMART:SM00427
SUPFAM:SSF47113UniParc:UPI0002955A52RefSeq:XP_006349042.1RefSeq:XP_015164197.1SEG:seg:
Description
Histone H2B.2 [Source:PGSC_GENE;Acc:PGSC0003DMG400000420]
Coordinates
chr11:+:39251242..39251916
Molecular Weight (calculated)
15598.1 Da
IEP (calculated)
10.873
GRAVY (calculated)
-0.739
Length
142 amino acids
Sequence
(BLAST)
001: MAPKAAAEKK PAEKKPTEEK KAEKTPKAGK KLPKESGSSG ADKKKKRSKK SVETYKIYIF KVLKQVHPDI GISSKSMGIM NSFINDIFEK LAQESSRLAR
101: INKKPTITSR EIQTAVRLVL PGELAKHAVS EGTKAVTKFT SS
Best Arabidopsis Sequence Match ( AT2G28720.1 )
(BLAST)
001: MAPKAGKKPA EKKPAEKAPA EEEKVAEKAP AEKKPKAGKK LPKEAVTGGV EKKKKRVKKS TETYKIYIFK VLKQVHPDIG ISSKAMGIMN SFINDIFEKL
101: AQEASKLARY NKKPTITSRE IQTAVRLVLP GELAKHAVSE GTKAVTKFTS S
Arabidopsis Description
Histone H2B.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI96]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.