Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 100.0 | 71.83 |
| TraesCS7B01G394900.1 | Wheat | nucleus | 100.0 | 71.83 |
| TraesCS7D01G477300.1 | Wheat | nucleus | 100.0 | 71.83 |
| TraesCS7D01G477400.1 | Wheat | nucleus | 100.0 | 71.83 |
| HORVU0Hr1G006420.1 | Barley | nucleus | 87.25 | 64.49 |
| HORVU3Hr1G034060.1 | Barley | nucleus | 87.25 | 64.49 |
| HORVU6Hr1G015790.1 | Barley | nucleus | 84.31 | 63.7 |
| EES00304 | Sorghum | nucleus | 90.2 | 61.74 |
| EES00399 | Sorghum | nucleus | 90.2 | 61.33 |
| HORVU6Hr1G087190.1 | Barley | nucleus | 90.2 | 61.33 |
| EES00305 | Sorghum | nucleus | 89.22 | 61.07 |
| Zm00001d039821_P001 | Maize | plastid | 89.22 | 61.07 |
| KRH22818 | Soybean | nucleus | 78.43 | 60.15 |
| KRH26542 | Soybean | nucleus | 78.43 | 59.7 |
| HORVU1Hr1G049920.1 | Barley | nucleus | 89.22 | 59.48 |
| EES15460 | Sorghum | nucleus | 88.24 | 59.21 |
| KRH19721 | Soybean | nucleus | 79.41 | 58.27 |
| GSMUA_Achr9P04060_001 | Banana | nucleus | 66.67 | 58.12 |
| Bra007018.1-P | Field mustard | nucleus | 78.43 | 57.97 |
| Bra039810.1-P | Field mustard | nucleus | 78.43 | 57.97 |
| KRG95819 | Soybean | nucleus | 78.43 | 57.97 |
| KRH67549 | Soybean | nucleus | 78.43 | 57.97 |
| Solyc03g071620.1.1 | Tomato | nucleus | 79.41 | 57.45 |
| KRG92106 | Soybean | nucleus | 76.47 | 57.35 |
| AT5G22880.1 | Thale cress | nucleus | 81.37 | 57.24 |
| PGSC0003DMT400043578 | Potato | nucleus | 78.43 | 56.74 |
| AT3G46030.1 | Thale cress | nucleus | 80.39 | 56.55 |
| Solyc11g066430.1.1 | Tomato | nucleus | 77.45 | 56.43 |
| Solyc06g074790.1.1 | Tomato | nucleus | 78.43 | 56.34 |
| Bra038267.1-P | Field mustard | nucleus | 75.49 | 56.2 |
| KRH34681 | Soybean | nucleus | 75.49 | 56.2 |
| PGSC0003DMT400077939 | Potato | nucleus | 80.39 | 56.16 |
| Solyc06g075800.1.1 | Tomato | nucleus | 80.39 | 56.16 |
| VIT_06s0004g04230.t01 | Wine grape | nucleus | 80.39 | 56.16 |
| VIT_06s0004g04250.t01 | Wine grape | nucleus | 81.37 | 56.08 |
| Bra002436.1-P | Field mustard | nucleus | 77.45 | 56.03 |
| Bra006685.1-P | Field mustard | nucleus | 77.45 | 56.03 |
| GSMUA_Achr2P19080_001 | Banana | nucleus | 78.43 | 55.94 |
| Bra020275.1-P | Field mustard | nucleus | 77.45 | 55.63 |
| PGSC0003DMT400070382 | Potato | nucleus | 78.43 | 55.56 |
| AT3G45980.1 | Thale cress | nucleus | 81.37 | 55.33 |
| AT5G59910.1 | Thale cress | nucleus | 81.37 | 55.33 |
| Bra002520.1-P | Field mustard | nucleus | 81.37 | 55.33 |
| KRH29833 | Soybean | nucleus | 77.45 | 55.24 |
| Bra003150.1-P | Field mustard | nucleus | 74.51 | 55.07 |
| Solyc11g007930.1.1 | Tomato | nucleus | 74.51 | 55.07 |
| PGSC0003DMT400001108 | Potato | nucleus | 76.47 | 54.93 |
| PGSC0003DMT400018456 | Potato | nucleus | 76.47 | 54.93 |
| PGSC0003DMT400070383 | Potato | nucleus | 76.47 | 54.93 |
| HORVU6Hr1G005950.2 | Barley | nucleus | 83.33 | 54.84 |
| AT1G07790.1 | Thale cress | nucleus | 79.41 | 54.73 |
| AT5G02570.1 | Thale cress | nucleus | 70.59 | 54.55 |
| VIT_13s0019g05370.t01 | Wine grape | nucleus | 77.45 | 54.48 |
| PGSC0003DMT400060096 | Potato | nucleus | 78.43 | 54.42 |
| Bra035677.1-P | Field mustard | nucleus | 79.41 | 54.36 |
| AT2G37470.1 | Thale cress | nucleus | 73.53 | 54.35 |
| AT3G53650.1 | Thale cress | nucleus | 73.53 | 54.35 |
| Bra006639.1-P | Field mustard | nucleus | 76.47 | 54.17 |
| Solyc11g007920.1.1 | Tomato | nucleus | 76.47 | 54.17 |
| KRH29831 | Soybean | nucleus | 78.43 | 54.05 |
| KRH29832 | Soybean | nucleus | 78.43 | 54.05 |
| KRH29836 | Soybean | nucleus | 78.43 | 54.05 |
| HORVU7Hr1G110170.1 | Barley | nucleus | 86.27 | 53.99 |
| PGSC0003DMT400018455 | Potato | nucleus | 75.49 | 53.85 |
| Solyc06g074780.1.1 | Tomato | nucleus | 75.49 | 53.85 |
| PGSC0003DMT400074994 | Potato | nucleus | 77.45 | 53.74 |
| Solyc05g055440.1.1 | Tomato | nucleus | 77.45 | 53.74 |
| Solyc06g005390.1.1 | Tomato | nucleus | 77.45 | 53.74 |
| Bra011930.1-P | Field mustard | nucleus | 78.43 | 53.69 |
| KRH24831 | Soybean | nucleus | 78.43 | 53.69 |
| KRH24833 | Soybean | nucleus | 78.43 | 53.69 |
| AT2G28720.1 | Thale cress | nucleus | 79.41 | 53.64 |
| HORVU4Hr1G009040.2 | Barley | nucleus | 90.2 | 53.49 |
| PGSC0003DMT400022099 | Potato | nucleus | 75.49 | 53.47 |
| VIT_06s0004g04300.t01 | Wine grape | nucleus | 79.41 | 53.29 |
| Solyc12g013510.1.1 | Tomato | nucleus | 72.55 | 53.24 |
| AT3G09480.1 | Thale cress | nucleus | 65.69 | 53.17 |
| KRH24830 | Soybean | nucleus | 77.45 | 53.02 |
| Solyc02g038690.1.1 | Tomato | nucleus | 69.61 | 52.99 |
| PGSC0003DMT400022074 | Potato | nucleus | 74.51 | 52.78 |
| HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 84.31 | 52.76 |
| HORVU4Hr1G070240.1 | Barley | nucleus | 84.31 | 51.81 |
| Bra000483.1-P | Field mustard | nucleus | 78.43 | 51.61 |
| HORVU3Hr1G013530.1 | Barley | nucleus | 82.35 | 51.22 |
| HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 86.27 | 50.87 |
| GSMUA_Achr7P15260_001 | Banana | nucleus | 75.49 | 50.66 |
| HORVU1Hr1G072190.4 | Barley | nucleus | 87.25 | 50.57 |
| HORVU6Hr1G008320.1 | Barley | nucleus | 77.45 | 50.32 |
| HORVU3Hr1G013680.1 | Barley | nucleus | 83.33 | 50.0 |
| HORVU1Hr1G091370.1 | Barley | nucleus | 77.45 | 49.69 |
| PGSC0003DMT400074020 | Potato | nucleus | 65.69 | 49.63 |
| HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 87.25 | 48.63 |
| HORVU2Hr1G077630.1 | Barley | nucleus | 86.27 | 48.62 |
| HORVU7Hr1G110190.1 | Barley | nucleus | 62.75 | 48.48 |
| HORVU1Hr1G078480.6 | Barley | nucleus | 85.29 | 48.33 |
| HORVU1Hr1G078530.3 | Barley | nucleus | 85.29 | 48.33 |
| HORVU1Hr1G058500.1 | Barley | nucleus | 85.29 | 47.54 |
| HORVU1Hr1G085540.1 | Barley | nucleus | 80.39 | 45.81 |
| HORVU7Hr1G110130.1 | Barley | nucleus | 51.96 | 44.92 |
| HORVU6Hr1G083110.1 | Barley | nucleus | 74.51 | 44.44 |
| HORVU7Hr1G110330.2 | Barley | nucleus | 50.98 | 43.7 |
| HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 87.25 | 42.58 |
| Solyc10g044580.1.1 | Tomato | nucleus | 55.88 | 42.22 |
| HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 87.25 | 41.98 |
| HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 84.31 | 40.76 |
| Zm00001d048491_P001 | Maize | plastid | 90.2 | 38.66 |
| HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 44.12 | 38.46 |
| HORVU1Hr1G066130.1 | Barley | nucleus | 87.25 | 36.63 |
| VIT_06s0004g04240.t01 | Wine grape | nucleus | 80.39 | 35.65 |
| HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 63.73 | 35.33 |
| HORVU3Hr1G086610.2 | Barley | nucleus | 72.55 | 35.24 |
| GSMUA_Achr6P33320_001 | Banana | nucleus | 62.75 | 30.92 |
| CDX71015 | Canola | nucleus | 19.61 | 30.3 |
| HORVU4Hr1G000750.1 | Barley | nucleus | 38.24 | 21.91 |
| PGSC0003DMT400074018 | Potato | nucleus | 57.84 | 15.49 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.3 | UniProt:A0A287XT63 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0046982 | EnsemblPlantsGene:HORVU7Hr1G110290 | EnsemblPlants:HORVU7Hr1G110290.1 | InterPro:Histone-fold |
| InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 | PFAM:PF00125 | PRINTS:PR00621 | PANTHER:PTHR23428 |
| PANTHER:PTHR23428:SF62 | SMART:SM00427 | SUPFAM:SSF47113 | UniParc:UPI000B465DE9 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:-:629640922..629641332
Molecular Weight (calculated)
11105.6 Da
IEP (calculated)
10.822
GRAVY (calculated)
-0.763
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: KKPAAAEKTP AAEKTTAGKK PKAEKRPPKS KEGGADKKKK KAKKSVETYK IYIFKVLKQV HPDIGISSKA MSIMNSFIND IFELAKHAVS EGTKAVTKFT
101: SS
101: SS
001: MAPRAEKKPA EKKPAAEKPV EEKSKAEKAP AEKKPKAGKK LPKEAGAGGD KKKKMKKKSV ETYKIYIFKV LKQVHPDIGI SSKAMGIMNS FINDIFEKLA
101: SESSKLARYN KKPTITSREI QTAVRLVLPG ELAKHAVSEG TKAVTKFTSS
101: SESSKLARYN KKPTITSREI QTAVRLVLPG ELAKHAVSEG TKAVTKFTSS
Arabidopsis Description
H2BHistone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V9F6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.