Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P20900_001 | Banana | nucleus | 34.81 | 71.21 |
| GSMUA_Achr9P04060_001 | Banana | nucleus | 60.74 | 70.09 |
| Os05t0460475-00 | Rice | nucleus | 54.81 | 69.81 |
| GSMUA_Achr10P... | Banana | nucleus | 33.33 | 68.18 |
| TraesCS6D01G046500.1 | Wheat | nucleus | 33.33 | 68.18 |
| Solyc11g007930.1.1 | Tomato | nucleus | 68.15 | 66.67 |
| TraesCS6B01G055300.1 | Wheat | nucleus | 47.41 | 66.67 |
| TraesCS6B01G055500.1 | Wheat | nucleus | 47.41 | 66.67 |
| Solyc03g071620.1.1 | Tomato | nucleus | 68.89 | 65.96 |
| TraesCS3A01G075800.1 | Wheat | nucleus | 46.67 | 65.62 |
| TraesCS2A01G312400.1 | Wheat | nucleus | 57.04 | 65.25 |
| TraesCS7B01G394800.1 | Wheat | nucleus | 46.67 | 64.95 |
| Solyc02g038690.1.1 | Tomato | nucleus | 64.44 | 64.93 |
| Solyc12g013510.1.1 | Tomato | nucleus | 66.67 | 64.75 |
| Solyc05g055440.1.1 | Tomato | nucleus | 70.37 | 64.63 |
| Solyc11g007920.1.1 | Tomato | nucleus | 68.89 | 64.58 |
| Bra006685.1-P | Field mustard | nucleus | 67.41 | 64.54 |
| CDX71064 | Canola | nucleus | 67.41 | 64.54 |
| CDX88732 | Canola | nucleus | 67.41 | 64.54 |
| TraesCS7B01G394500.1 | Wheat | nucleus | 45.19 | 63.54 |
| Solyc06g075800.1.1 | Tomato | nucleus | 68.15 | 63.01 |
| TraesCS3B01G390100.1 | Wheat | nucleus | 62.96 | 62.96 |
| CDX71019 | Canola | nucleus | 65.93 | 62.68 |
| Bra006639.1-P | Field mustard | nucleus | 66.67 | 62.5 |
| CDX88779 | Canola | nucleus | 66.67 | 62.5 |
| TraesCS3A01G357500.1 | Wheat | nucleus | 62.96 | 62.5 |
| TraesCS3D01G351300.1 | Wheat | nucleus | 62.96 | 62.5 |
| TraesCS3D01G351400.1 | Wheat | nucleus | 62.96 | 62.5 |
| Bra002436.1-P | Field mustard | nucleus | 65.19 | 62.41 |
| CDY26964 | Canola | nucleus | 65.19 | 62.41 |
| TraesCS3A01G357400.1 | Wheat | nucleus | 63.7 | 62.32 |
| KRH29833 | Soybean | nucleus | 65.93 | 62.24 |
| KRH29831 | Soybean | nucleus | 68.15 | 62.16 |
| KRH29832 | Soybean | nucleus | 68.15 | 62.16 |
| KRH29836 | Soybean | nucleus | 68.15 | 62.16 |
| Solyc11g066430.1.1 | Tomato | nucleus | 64.44 | 62.14 |
| AT5G22880.1 | Thale cress | nucleus | 66.67 | 62.07 |
| Solyc06g074790.1.1 | Tomato | nucleus | 65.19 | 61.97 |
| TraesCS3B01G390000.1 | Wheat | nucleus | 62.22 | 61.76 |
| KRH24831 | Soybean | nucleus | 68.15 | 61.74 |
| KRH24833 | Soybean | nucleus | 68.15 | 61.74 |
| HORVU6Hr1G015790.1 | Barley | nucleus | 61.48 | 61.48 |
| PGSC0003DMT400074020 | Potato | nucleus | 61.48 | 61.48 |
| VIT_13s0019g05370.t01 | Wine grape | nucleus | 65.93 | 61.38 |
| KRH24830 | Soybean | nucleus | 67.41 | 61.07 |
| TraesCS6A01G086400.1 | Wheat | nucleus | 60.74 | 60.74 |
| TraesCS6B01G116000.1 | Wheat | nucleus | 60.74 | 60.74 |
| TraesCSU01G077200.1 | Wheat | nucleus | 60.74 | 60.74 |
| EES03855 | Sorghum | nucleus | 61.48 | 60.58 |
| Zm00001d012423_P001 | Maize | plastid | 61.48 | 60.58 |
| Solyc06g005390.1.1 | Tomato | nucleus | 65.93 | 60.54 |
| CDX92329 | Canola | nucleus | 64.44 | 60.42 |
| TraesCS3D01G099000.1 | Wheat | nucleus | 60.74 | 60.29 |
| TraesCS6D01G046200.1 | Wheat | nucleus, unclear | 60.74 | 60.29 |
| GSMUA_Achr2P19080_001 | Banana | nucleus | 63.7 | 60.14 |
| TraesCS3B01G114600.1 | Wheat | nucleus | 60.0 | 60.0 |
| TraesCS6A01G086200.1 | Wheat | nucleus | 60.0 | 60.0 |
| TraesCSU01G077400.1 | Wheat | nucleus | 60.0 | 60.0 |
| Zm00001d042930_P001 | Maize | plastid | 60.74 | 59.85 |
| Os01t0839500-00 | Rice | nucleus | 61.48 | 59.71 |
| TraesCS7B01G405800.1 | Wheat | nucleus | 61.48 | 59.71 |
| TraesCS3D01G075900.1 | Wheat | nucleus | 60.0 | 59.56 |
| TraesCS7A01G491000.1 | Wheat | nucleus | 60.74 | 59.42 |
| TraesCS7B01G394600.1 | Wheat | nucleus | 60.74 | 59.42 |
| TraesCS7B01G394700.1 | Wheat | nucleus | 60.74 | 59.42 |
| TraesCS3B01G114400.1 | Wheat | nucleus | 59.26 | 59.26 |
| TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 62.22 | 59.15 |
| TraesCS7B01G394900.1 | Wheat | nucleus | 62.22 | 59.15 |
| TraesCS7D01G477300.1 | Wheat | nucleus | 62.22 | 59.15 |
| TraesCS6D01G046600.1 | Wheat | nucleus | 59.26 | 58.82 |
| TraesCS1B01G294500.1 | Wheat | nucleus | 64.44 | 58.78 |
| Solyc06g074780.1.1 | Tomato | nucleus | 62.22 | 58.74 |
| HORVU0Hr1G006420.1 | Barley | nucleus | 60.0 | 58.7 |
| HORVU3Hr1G034060.1 | Barley | nucleus | 60.0 | 58.7 |
| TraesCS3D01G342400.1 | Wheat | nucleus | 60.0 | 58.7 |
| TraesCS7B01G394100.1 | Wheat | nucleus | 60.0 | 58.7 |
| TraesCS7B01G394400.1 | Wheat | nucleus | 60.0 | 58.7 |
| TraesCS4D01G205300.1 | Wheat | nucleus | 61.48 | 58.45 |
| TraesCS7D01G477400.1 | Wheat | nucleus | 61.48 | 58.45 |
| TraesCSU01G169300.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G169400.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G169500.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G169700.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G169800.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G169900.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G170400.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G170500.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G170600.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G170700.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G170900.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G171000.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCSU01G171100.1 | Wheat | nucleus | 63.7 | 58.11 |
| TraesCS6A01G040500.1 | Wheat | nucleus | 58.52 | 58.09 |
| TraesCS6A01G040200.1 | Wheat | nucleus | 59.26 | 57.97 |
| TraesCS7A01G490900.1 | Wheat | nucleus | 59.26 | 57.97 |
| EES00304 | Sorghum | nucleus | 63.7 | 57.72 |
| EES00305 | Sorghum | nucleus | 63.7 | 57.72 |
| TraesCS4A01G099900.1 | Wheat | nucleus | 63.7 | 57.72 |
| TraesCS4B01G204400.1 | Wheat | nucleus | 63.7 | 57.72 |
| TraesCS7D01G485700.1 | Wheat | nucleus | 59.26 | 57.55 |
| OQU92807 | Sorghum | nucleus | 62.96 | 57.43 |
| Zm00001d044247_P001 | Maize | plastid | 62.96 | 57.43 |
| EES00399 | Sorghum | nucleus | 63.7 | 57.33 |
| TraesCS5A01G384300.1 | Wheat | nucleus | 64.44 | 57.24 |
| EES18353 | Sorghum | nucleus | 62.22 | 57.14 |
| Zm00001d039821_P001 | Maize | plastid | 62.96 | 57.05 |
| TraesCS3D01G351500.1 | Wheat | nucleus | 51.85 | 56.91 |
| Os03t0279000-00 | Rice | nucleus | 63.7 | 56.58 |
| TraesCS2D01G310800.1 | Wheat | nucleus | 63.7 | 56.58 |
| TraesCS3D01G088900.1 | Wheat | nucleus | 63.7 | 56.58 |
| TraesCS4A01G260400.1 | Wheat | nucleus | 63.7 | 56.58 |
| TraesCS4D01G054200.1 | Wheat | nucleus | 63.7 | 56.58 |
| TraesCS5B01G389100.1 | Wheat | nucleus | 63.7 | 56.58 |
| TraesCS6B01G048500.1 | Wheat | unclear | 60.74 | 56.55 |
| TraesCS1A01G190400.1 | Wheat | nucleus | 58.52 | 56.43 |
| TraesCS6D01G046400.1 | Wheat | nucleus | 58.52 | 56.43 |
| TraesCS6B01G048800.1 | Wheat | nucleus | 60.0 | 56.25 |
| TraesCS6B01G049100.1 | Wheat | nucleus | 60.0 | 56.25 |
| TraesCS6A01G040400.1 | Wheat | nucleus | 57.78 | 56.12 |
| TraesCS4A01G030500.1 | Wheat | nucleus | 58.52 | 56.03 |
| Zm00001d011236_P001 | Maize | plastid | 62.22 | 56.0 |
| EES15460 | Sorghum | nucleus | 62.96 | 55.92 |
| GSMUA_Achr7P15260_001 | Banana | nucleus | 62.96 | 55.92 |
| Zm00001d007084_P001 | Maize | plastid | 62.96 | 55.92 |
| HORVU7Hr1G110290.1 | Barley | nucleus | 42.22 | 55.88 |
| TraesCS6D01G040600.1 | Wheat | nucleus | 60.0 | 55.86 |
| Zm00001d051591_P001 | Maize | plastid | 63.7 | 55.84 |
| HORVU1Hr1G049920.1 | Barley | nucleus | 62.96 | 55.56 |
| Os01t0153100-00 | Rice | nucleus | 62.96 | 55.56 |
| TraesCS1B01G357600.1 | Wheat | nucleus | 59.26 | 55.56 |
| TraesCS3A01G102500.1 | Wheat | nucleus | 59.26 | 55.56 |
| TraesCS6A01G034500.1 | Wheat | nucleus | 59.26 | 55.56 |
| TraesCS6A01G035000.1 | Wheat | nucleus | 59.26 | 55.56 |
| TraesCS6B01G049300.1 | Wheat | nucleus | 59.26 | 55.56 |
| TraesCS6B01G082600.1 | Wheat | nucleus | 59.26 | 55.56 |
| HORVU6Hr1G087190.1 | Barley | nucleus | 61.48 | 55.33 |
| Zm00001d032070_P001 | Maize | plastid | 61.48 | 55.33 |
| Zm00001d050100_P001 | Maize | plastid | 61.48 | 55.33 |
| TraesCS1B01G244900.1 | Wheat | nucleus | 62.22 | 55.26 |
| TraesCS1B01G245300.1 | Wheat | nucleus | 62.22 | 55.26 |
| TraesCS1D01G233300.1 | Wheat | nucleus | 62.22 | 55.26 |
| EES15092 | Sorghum | nucleus | 61.48 | 54.97 |
| TraesCS3A01G088800.1 | Wheat | nucleus | 61.48 | 54.97 |
| Zm00001d020580_P001 | Maize | plastid | 61.48 | 54.97 |
| EER96770 | Sorghum | nucleus | 62.22 | 54.9 |
| OQU87075 | Sorghum | nucleus | 62.22 | 54.9 |
| TraesCS1B01G192500.1 | Wheat | nucleus | 62.22 | 54.9 |
| EES07386 | Sorghum | nucleus | 62.96 | 54.84 |
| TraesCS5D01G020000.1 | Wheat | nucleus | 63.7 | 54.78 |
| Zm00001d025913_P001 | Maize | plastid | 60.74 | 54.67 |
| Os05t0574300-00 | Rice | nucleus | 61.48 | 54.61 |
| TraesCS1A01G228700.1 | Wheat | nucleus | 61.48 | 54.61 |
| TraesCS4B01G054200.1 | Wheat | nucleus | 61.48 | 54.61 |
| TraesCS4A01G030400.1 | Wheat | nucleus | 62.22 | 54.55 |
| TraesCS4B01G275400.1 | Wheat | nucleus | 62.22 | 54.55 |
| TraesCS6D01G040200.1 | Wheat | nucleus | 58.52 | 54.48 |
| EER97675 | Sorghum | nucleus | 60.74 | 54.3 |
| Os01t0149600-01 | Rice | nucleus | 61.48 | 54.25 |
| Os01t0152300-00 | Rice | nucleus | 61.48 | 54.25 |
| Os01t0152900-00 | Rice | nucleus | 61.48 | 54.25 |
| TraesCS5B01G058200.1 | Wheat | nucleus | 63.7 | 54.09 |
| TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 63.7 | 54.09 |
| Zm00001d005789_P001 | Maize | plastid | 60.74 | 53.95 |
| TraesCS5A01G051900.1 | Wheat | nucleus | 62.22 | 53.85 |
| HORVU7Hr1G110190.1 | Barley | nucleus | 52.59 | 53.79 |
| TraesCS3B01G390300.1 | Wheat | nucleus | 53.33 | 53.73 |
| TraesCS1B01G416600.1 | Wheat | nucleus | 60.0 | 53.64 |
| Os01t0153300-00 | Rice | nucleus | 61.48 | 53.55 |
| TraesCS1D01G396600.1 | Wheat | golgi, nucleus, unclear | 59.26 | 53.33 |
| TraesCS6B01G376900.1 | Wheat | nucleus | 60.0 | 53.29 |
| HORVU6Hr1G005950.2 | Barley | nucleus | 60.74 | 52.9 |
| TraesCS1D01G232900.1 | Wheat | nucleus | 61.48 | 52.87 |
| TraesCS1A01G361600.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1A01G367900.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1A01G368000.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1A01G388600.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1B01G386200.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1B01G386400.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1B01G386500.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1B01G386700.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1D01G194600.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1D01G366300.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1D01G373800.1 | Wheat | nucleus | 59.26 | 52.29 |
| TraesCS1D01G373900.1 | Wheat | nucleus | 59.26 | 52.29 |
| HORVU6Hr1G008320.1 | Barley | nucleus | 60.74 | 52.23 |
| TraesCS6B01G084900.1 | Wheat | nucleus | 59.26 | 51.95 |
| TraesCS6D01G326800.1 | Wheat | nucleus, unclear | 59.26 | 51.95 |
| TraesCS1B01G378300.1 | Wheat | nucleus | 58.52 | 51.63 |
| TraesCS1B01G386600.1 | Wheat | nucleus | 58.52 | 51.63 |
| TraesCSU01G081100.1 | Wheat | nucleus | 58.52 | 51.3 |
| HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 61.48 | 50.92 |
| HORVU1Hr1G091370.1 | Barley | nucleus | 59.26 | 50.31 |
| HORVU7Hr1G110170.1 | Barley | nucleus | 60.74 | 50.31 |
| HORVU3Hr1G013530.1 | Barley | nucleus | 60.74 | 50.0 |
| HORVU4Hr1G070240.1 | Barley | nucleus | 61.48 | 50.0 |
| TraesCS5D01G393900.1 | Wheat | nucleus | 60.74 | 50.0 |
| HORVU1Hr1G072190.4 | Barley | nucleus | 64.44 | 49.43 |
| HORVU4Hr1G009040.2 | Barley | nucleus | 61.48 | 48.26 |
| HORVU3Hr1G013680.1 | Barley | nucleus | 60.74 | 48.24 |
| HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 60.74 | 47.4 |
| HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 40.74 | 47.01 |
| HORVU7Hr1G110130.1 | Barley | nucleus | 40.74 | 46.61 |
| HORVU1Hr1G058500.1 | Barley | nucleus | 62.96 | 46.45 |
| HORVU2Hr1G077630.1 | Barley | nucleus | 62.22 | 46.41 |
| HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 62.22 | 45.9 |
| HORVU7Hr1G110330.2 | Barley | nucleus | 40.0 | 45.38 |
| HORVU1Hr1G085540.1 | Barley | nucleus | 60.0 | 45.25 |
| HORVU1Hr1G078480.6 | Barley | nucleus | 60.0 | 45.0 |
| HORVU1Hr1G078530.3 | Barley | nucleus | 60.0 | 45.0 |
| HORVU6Hr1G083110.1 | Barley | nucleus | 55.56 | 43.86 |
| HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 63.7 | 41.15 |
| HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 62.96 | 40.09 |
| HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 62.22 | 39.81 |
| Os08t0490900-00 | Rice | nucleus | 62.22 | 39.62 |
| HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 53.33 | 39.13 |
| GSMUA_Achr6P33320_001 | Banana | nucleus | 58.52 | 38.16 |
| HORVU3Hr1G086610.2 | Barley | nucleus | 58.52 | 37.62 |
| Zm00001d048491_P001 | Maize | plastid | 62.96 | 35.71 |
| HORVU1Hr1G066130.1 | Barley | nucleus | 62.96 | 34.98 |
| TraesCS6B01G081700.1 | Wheat | nucleus | 42.22 | 34.76 |
| TraesCS6D01G063200.1 | Wheat | nucleus | 45.19 | 30.81 |
| TraesCS6A01G061400.1 | Wheat | nucleus | 42.96 | 27.75 |
| Solyc06g074750.1.1 | Tomato | mitochondrion, nucleus | 43.7 | 20.85 |
| PGSC0003DMT400074018 | Potato | nucleus | 54.81 | 19.42 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.3 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005694 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 |
| UniProt:K4CZI1 | PFAM:PF00125 | PRINTS:PR00621 | PANTHER:PTHR23428 | PANTHER:PTHR23428:SF171 | SMART:SM00427 |
| SUPFAM:SSF47113 | EnsemblPlantsGene:Solyc10g044580.1 | EnsemblPlants:Solyc10g044580.1.1 | UniParc:UPI000276B1D5 | SEG:seg | : |
Description
No Description!
Coordinates
chr10:-:26937246..26937653
Molecular Weight (calculated)
15085.3 Da
IEP (calculated)
10.406
GRAVY (calculated)
-0.364
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKAETKSS AEKAAAAVAE KSKSIMKIPT YATGDKKSKT SKKSVETYKN YIFKVLKQVN PDLDISSKAM GIMKNFINDI FEKLSQEFST LARYNKKRTI
101: TTWEIQTAVW LVLPVELAKH AAIEGTTTVS KFKIS
101: TTWEIQTAVW LVLPVELAKH AAIEGTTTVS KFKIS
001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
Arabidopsis Description
HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.