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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH29833 Soybean nucleus 95.97 100.0
KRH24831 Soybean nucleus 99.33 99.33
KRH24833 Soybean nucleus 99.33 99.33
KRH29831 Soybean nucleus 98.66 99.32
KRH29832 Soybean nucleus 98.66 99.32
KRH29836 Soybean nucleus 98.66 99.32
GSMUA_Achr8P20900_001 Banana nucleus 42.28 95.45
VIT_06s0004g04250.t01 Wine grape nucleus 93.96 94.59
PGSC0003DMT400077939 Potato nucleus 91.95 93.84
PGSC0003DMT400043578 Potato nucleus 88.59 93.62
KRG95819 Soybean nucleus 86.58 93.48
KRH67549 Soybean nucleus 86.58 93.48
Solyc06g075800.1.1 Tomato nucleus 91.28 93.15
VIT_06s0004g04230.t01 Wine grape nucleus 91.28 93.15
Solyc03g071620.1.1 Tomato nucleus 87.92 92.91
KRG92106 Soybean nucleus 84.56 92.65
KRH26542 Soybean nucleus 83.22 92.54
KRH22818 Soybean nucleus 82.55 92.48
GSMUA_Achr10P... Banana nucleus 40.94 92.42
KRH19721 Soybean nucleus 85.91 92.09
PGSC0003DMT400070382 Potato nucleus 88.59 91.67
TraesCS6B01G055300.1 Wheat nucleus 59.06 91.67
TraesCS6B01G055500.1 Wheat nucleus 59.06 91.67
KRH34681 Soybean nucleus 83.89 91.24
Solyc11g007920.1.1 Tomato nucleus 87.92 90.97
TraesCS6D01G046500.1 Wheat nucleus 40.27 90.91
VIT_06s0004g04300.t01 Wine grape nucleus 92.62 90.79
TraesCS3A01G075800.1 Wheat nucleus 58.39 90.62
GSMUA_Achr9P04060_001 Banana nucleus 71.14 90.6
PGSC0003DMT400060096 Potato nucleus 89.26 90.48
PGSC0003DMT400022099 Potato nucleus 87.25 90.28
PGSC0003DMT400070383 Potato nucleus 85.91 90.14
Os01t0839500-00 Rice nucleus 83.89 89.93
PGSC0003DMT400022074 Potato nucleus 86.58 89.58
Solyc02g038690.1.1 Tomato nucleus 80.54 89.55
Bra002436.1-P Field mustard nucleus 84.56 89.36
Bra006685.1-P Field mustard nucleus 84.56 89.36
CDX71064 Canola nucleus 84.56 89.36
CDX88732 Canola nucleus 84.56 89.36
CDY26964 Canola nucleus 84.56 89.36
Solyc12g013510.1.1 Tomato nucleus 83.22 89.21
PGSC0003DMT400074994 Potato nucleus 87.92 89.12
Solyc05g055440.1.1 Tomato nucleus 87.92 89.12
Solyc06g005390.1.1 Tomato nucleus 87.92 89.12
TraesCS2A01G312400.1 Wheat nucleus 70.47 88.98
CDX71019 Canola nucleus 84.56 88.73
TraesCS7B01G394800.1 Wheat nucleus 57.72 88.66
CDY15776 Canola nucleus 87.92 88.51
VIT_13s0019g05370.t01 Wine grape nucleus 85.91 88.28
AT2G28720.1 Thale cress nucleus 89.26 88.08
CDY71843 Canola nucleus 87.92 87.92
AT1G07790.1 Thale cress nucleus 87.25 87.84
Os05t0460475-00 Rice nucleus 62.42 87.74
Solyc11g007930.1.1 Tomato nucleus 81.21 87.68
TraesCS3A01G357500.1 Wheat nucleus 79.87 87.5
TraesCS3D01G351300.1 Wheat nucleus 79.87 87.5
TraesCS3D01G351400.1 Wheat nucleus 79.87 87.5
Bra011930.1-P Field mustard nucleus 87.25 87.25
TraesCS3A01G357400.1 Wheat nucleus 80.54 86.96
Bra006639.1-P Field mustard nucleus 83.89 86.81
CDX88779 Canola nucleus 83.89 86.81
TraesCS3B01G390000.1 Wheat nucleus 79.19 86.76
TraesCS3B01G390100.1 Wheat nucleus 78.52 86.67
Bra035677.1-P Field mustard nucleus 86.58 86.58
AT5G22880.1 Thale cress nucleus 83.89 86.21
TraesCS3D01G099000.1 Wheat nucleus 78.52 86.03
HORVU6Hr1G015790.1 Barley nucleus 77.85 85.93
TraesCS3B01G114600.1 Wheat nucleus 77.85 85.93
TraesCS6A01G086400.1 Wheat nucleus 77.85 85.93
TraesCS6B01G116000.1 Wheat nucleus 77.85 85.93
TraesCSU01G077200.1 Wheat nucleus 77.85 85.93
CDX95762 Canola nucleus 86.58 85.43
CDX92329 Canola nucleus 82.55 85.42
TraesCS7B01G394500.1 Wheat nucleus 55.03 85.42
EES03855 Sorghum nucleus 78.52 85.4
Zm00001d012423_P001 Maize plastid 78.52 85.4
Zm00001d042930_P001 Maize plastid 78.52 85.4
TraesCS6A01G086200.1 Wheat nucleus 77.18 85.19
TraesCSU01G077400.1 Wheat nucleus 77.18 85.19
TraesCS1B01G294500.1 Wheat nucleus 84.56 85.14
CDY72471 Canola nucleus 87.25 84.97
TraesCS3D01G075900.1 Wheat nucleus 77.18 84.56
TraesCS6D01G046600.1 Wheat nucleus 77.18 84.56
TraesCS3B01G114400.1 Wheat nucleus 76.51 84.44
CDX77199 Canola nucleus 87.25 84.42
TraesCS6A01G040500.1 Wheat nucleus 76.51 83.82
TraesCS6D01G046200.1 Wheat nucleus, unclear 76.51 83.82
EES18353 Sorghum nucleus 82.55 83.67
Bra000483.1-P Field mustard nucleus 86.58 83.23
CDX83300 Canola nucleus 86.58 83.23
GSMUA_Achr2P19080_001 Banana nucleus 79.87 83.22
TraesCS4D01G205300.1 Wheat nucleus 79.19 83.1
TraesCS3D01G342400.1 Wheat nucleus 76.51 82.61
OQU92807 Sorghum nucleus 81.88 82.43
TraesCS1A01G190400.1 Wheat nucleus 77.18 82.14
TraesCS7A01G491000.1 Wheat nucleus 75.84 81.88
TraesCS7B01G394700.1 Wheat nucleus 75.84 81.88
EES00304 Sorghum nucleus 81.88 81.88
Zm00001d039821_P001 Maize plastid 81.88 81.88
EES15460 Sorghum nucleus 83.22 81.58
EES00399 Sorghum nucleus 81.88 81.33
TraesCS3D01G351500.1 Wheat nucleus 67.11 81.3
TraesCS7B01G405800.1 Wheat nucleus 75.84 81.3
EES00305 Sorghum nucleus 81.21 81.21
HORVU0Hr1G006420.1 Barley nucleus 75.17 81.16
HORVU3Hr1G034060.1 Barley nucleus 75.17 81.16
TraesCS7A01G490900.1 Wheat nucleus 75.17 81.16
TraesCS7B01G394600.1 Wheat nucleus 75.17 81.16
Zm00001d044247_P001 Maize plastid 80.54 81.08
TraesCS7A01G491100.1 Wheat extracellular, nucleus, unclear 77.18 80.99
TraesCS7B01G394900.1 Wheat nucleus 77.18 80.99
TraesCS7D01G477300.1 Wheat nucleus 77.18 80.99
Os03t0279000-00 Rice nucleus 82.55 80.92
TraesCS4A01G030500.1 Wheat nucleus 76.51 80.85
TraesCS6D01G046400.1 Wheat nucleus 75.84 80.71
Zm00001d011236_P001 Maize plastid 81.21 80.67
TraesCS6A01G040400.1 Wheat nucleus 75.17 80.58
TraesCS6A01G040200.1 Wheat nucleus 74.5 80.43
TraesCS7B01G394100.1 Wheat nucleus 74.5 80.43
TraesCS7B01G394400.1 Wheat nucleus 74.5 80.43
TraesCSU01G169300.1 Wheat nucleus 79.87 80.41
TraesCSU01G169400.1 Wheat nucleus 79.87 80.41
TraesCSU01G169500.1 Wheat nucleus 79.87 80.41
TraesCSU01G169700.1 Wheat nucleus 79.87 80.41
TraesCSU01G169800.1 Wheat nucleus 79.87 80.41
TraesCSU01G169900.1 Wheat nucleus 79.87 80.41
TraesCSU01G170400.1 Wheat nucleus 79.87 80.41
TraesCSU01G170500.1 Wheat nucleus 79.87 80.41
TraesCSU01G170600.1 Wheat nucleus 79.87 80.41
TraesCSU01G170700.1 Wheat nucleus 79.87 80.41
TraesCSU01G170900.1 Wheat nucleus 79.87 80.41
TraesCSU01G171000.1 Wheat nucleus 79.87 80.41
TraesCSU01G171100.1 Wheat nucleus 79.87 80.41
TraesCS7D01G477400.1 Wheat nucleus 76.51 80.28
TraesCS2D01G310800.1 Wheat nucleus 81.88 80.26
TraesCS4A01G099900.1 Wheat nucleus 79.87 79.87
EER96770 Sorghum nucleus 81.88 79.74
TraesCS3D01G088900.1 Wheat nucleus 81.21 79.61
TraesCS5B01G389100.1 Wheat nucleus 81.21 79.61
Zm00001d020580_P001 Maize plastid 80.54 79.47
EES07386 Sorghum nucleus 82.55 79.35
HORVU6Hr1G087190.1 Barley nucleus 79.87 79.33
TraesCS4B01G204400.1 Wheat nucleus 79.19 79.19
TraesCS1B01G357600.1 Wheat nucleus 76.51 79.17
Os01t0153100-00 Rice nucleus 81.21 79.08
TraesCS1B01G244900.1 Wheat nucleus 80.54 78.95
TraesCS1B01G245300.1 Wheat nucleus 80.54 78.95
TraesCS4A01G260400.1 Wheat nucleus 80.54 78.95
TraesCS4B01G054200.1 Wheat nucleus 80.54 78.95
TraesCS4D01G054200.1 Wheat nucleus 80.54 78.95
TraesCS5A01G384300.1 Wheat nucleus 80.54 78.95
Zm00001d007084_P001 Maize plastid 80.54 78.95
EER97675 Sorghum nucleus 79.87 78.81
TraesCS3A01G088800.1 Wheat nucleus 79.87 78.81
TraesCS1D01G396600.1 Wheat golgi, nucleus, unclear 79.19 78.67
Zm00001d050100_P001 Maize plastid 79.19 78.67
TraesCS3A01G102500.1 Wheat nucleus 75.84 78.47
TraesCS6A01G034500.1 Wheat nucleus 75.84 78.47
TraesCS6A01G035000.1 Wheat nucleus 75.84 78.47
TraesCS6B01G048800.1 Wheat nucleus 75.84 78.47
TraesCS6B01G049300.1 Wheat nucleus 75.84 78.47
HORVU1Hr1G049920.1 Barley nucleus 80.54 78.43
OQU87075 Sorghum nucleus 80.54 78.43
Os01t0149600-01 Rice nucleus 80.54 78.43
Os01t0152900-00 Rice nucleus 80.54 78.43
TraesCS1B01G192500.1 Wheat nucleus 80.54 78.43
TraesCS7D01G485700.1 Wheat nucleus 73.15 78.42
TraesCS3B01G390300.1 Wheat nucleus 70.47 78.36
Os05t0574300-00 Rice nucleus 79.87 78.29
TraesCS1A01G228700.1 Wheat nucleus 79.87 78.29
TraesCS1D01G233300.1 Wheat nucleus 79.87 78.29
Zm00001d005789_P001 Maize plastid 79.87 78.29
EES15092 Sorghum nucleus 79.19 78.15
Zm00001d025913_P001 Maize plastid 78.52 78.0
Zm00001d032070_P001 Maize plastid 78.52 78.0
TraesCS6B01G048500.1 Wheat unclear 75.84 77.93
TraesCS4B01G275400.1 Wheat nucleus 80.54 77.92
Zm00001d051591_P001 Maize plastid 80.54 77.92
TraesCS6B01G049100.1 Wheat nucleus 75.17 77.78
TraesCS6B01G082600.1 Wheat nucleus 75.17 77.78
TraesCS1B01G416600.1 Wheat nucleus 78.52 77.48
HORVU7Hr1G110290.1 Barley nucleus 53.02 77.45
TraesCS4A01G030400.1 Wheat nucleus 79.87 77.27
TraesCS6D01G040600.1 Wheat nucleus 75.17 77.24
Os01t0152300-00 Rice nucleus 79.19 77.12
TraesCS5D01G020000.1 Wheat nucleus 81.21 77.07
PGSC0003DMT400074020 Potato nucleus 69.8 77.04
GSMUA_Achr7P15260_001 Banana nucleus 78.52 76.97
TraesCS5A01G051900.1 Wheat nucleus 80.54 76.92
Os01t0153300-00 Rice nucleus 79.87 76.77
TraesCS5B01G058200.1 Wheat nucleus 81.88 76.73
TraesCS5B01G064900.1 Wheat nucleus, unclear 81.88 76.73
TraesCS6D01G040200.1 Wheat nucleus 74.5 76.55
TraesCS1A01G388600.1 Wheat nucleus 78.52 76.47
TraesCS1A01G361600.1 Wheat nucleus 77.85 75.82
TraesCS1A01G367900.1 Wheat nucleus 77.85 75.82
TraesCS1A01G368000.1 Wheat nucleus 77.85 75.82
TraesCS1B01G378300.1 Wheat nucleus 77.85 75.82
TraesCS1B01G386400.1 Wheat nucleus 77.85 75.82
TraesCS1D01G194600.1 Wheat nucleus 77.85 75.82
TraesCS1D01G366300.1 Wheat nucleus 77.85 75.82
TraesCS6B01G376900.1 Wheat nucleus 77.18 75.66
HORVU6Hr1G005950.2 Barley nucleus 78.52 75.48
TraesCS1B01G386200.1 Wheat nucleus 77.18 75.16
TraesCS1B01G386600.1 Wheat nucleus 77.18 75.16
TraesCS1B01G386700.1 Wheat nucleus 77.18 75.16
TraesCS1D01G373800.1 Wheat nucleus 77.18 75.16
TraesCS1D01G373900.1 Wheat nucleus 77.18 75.16
TraesCS6B01G084900.1 Wheat nucleus 77.18 74.68
TraesCS1B01G386500.1 Wheat nucleus 76.51 74.51
TraesCS6D01G326800.1 Wheat nucleus, unclear 76.51 74.03
TraesCSU01G081100.1 Wheat nucleus 75.84 73.38
HORVU6Hr1G008320.1 Barley nucleus 77.18 73.25
TraesCS1D01G232900.1 Wheat nucleus 77.18 73.25
HORVU1Hr1G091370.1 Barley nucleus 77.85 72.96
HORVU7Hr1G110130.1 Barley nucleus 57.72 72.88
HORVU1Hr1G072190.4 Barley nucleus 84.56 71.59
HORVU7Hr1G110330.2 Barley nucleus 57.05 71.43
HORVU6Hr1G015760.1 Barley nucleus, plastid 77.85 71.17
HORVU4Hr1G070240.1 Barley nucleus 77.85 69.88
HORVU7Hr1G110190.1 Barley nucleus 61.74 69.7
HORVU3Hr1G013530.1 Barley nucleus 76.51 69.51
TraesCS5D01G393900.1 Wheat nucleus 76.51 69.51
HORVU4Hr1G009040.2 Barley nucleus 79.87 69.19
HORVU7Hr1G110170.1 Barley nucleus 75.17 68.71
HORVU3Hr1G013680.1 Barley nucleus 77.18 67.65
Solyc10g044580.1.1 Tomato nucleus 61.07 67.41
HORVU2Hr1G077630.1 Barley nucleus 81.88 67.4
HORVU1Hr1G058500.1 Barley nucleus 81.21 66.12
HORVU4Hr1G073130.1 Barley nucleus, plastid 80.54 65.57
HORVU1Hr1G085540.1 Barley nucleus 78.52 65.36
HORVU6Hr1G006110.1 Barley nucleus, plastid 51.01 64.96
HORVU7Hr1G110090.1 Barley nucleus, plastid 75.17 64.74
HORVU1Hr1G078480.6 Barley nucleus 77.85 64.44
HORVU1Hr1G078530.3 Barley nucleus 77.85 64.44
HORVU6Hr1G083110.1 Barley nucleus 71.14 61.99
VIT_06s0004g04240.t01 Wine grape nucleus 92.62 60.0
HORVU5Hr1G094500.1 Barley nucleus, plastid 81.88 57.55
HORVU3Hr1G015810.1 Barley nucleus, plastid 80.54 57.42
Os08t0490900-00 Rice nucleus 81.21 57.08
HORVU1Hr1G056530.1 Barley nucleus, plastid 80.54 56.87
HORVU3Hr1G086580.1 Barley nucleus, plastid 67.79 54.89
HORVU3Hr1G086610.2 Barley nucleus 73.83 52.38
Zm00001d048491_P001 Maize plastid 81.88 51.26
GSMUA_Achr6P33320_001 Banana nucleus 70.47 50.72
HORVU1Hr1G066130.1 Barley nucleus 82.55 50.62
TraesCS6B01G081700.1 Wheat nucleus 51.01 46.34
TraesCS6D01G063200.1 Wheat nucleus 53.02 39.9
TraesCS6A01G061400.1 Wheat nucleus 52.35 37.32
KRH30545 Soybean mitochondrion, nucleus 47.65 35.68
KRH25129 Soybean nucleus 51.01 33.78
PGSC0003DMT400074018 Potato nucleus 60.4 23.62
Protein Annotations
Gene3D:1.10.20.10MapMan:12.1.3EMBL:ACUP02007187EnsemblPlantsGene:GLYMA_12G065100GO:GO:0000786GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005694GO:GO:0046982InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3
InterPro:Histone_H2BUniProt:I1LQT0InterPro:IPR009072EnsemblPlants:KRH24830ProteinID:KRH24830ProteinID:KRH24830.1
PFAM:PF00125PRINTS:PR00621ScanProsite:PS00357PANTHER:PTHR23428PANTHER:PTHR23428:SF97SMART:SM00427
SUPFAM:SSF47113UniParc:UPI000233D2F6SEG:seg:::
Description
hypothetical protein
Coordinates
chr12:-:4793422..4794276
Molecular Weight (calculated)
16279.0 Da
IEP (calculated)
10.822
GRAVY (calculated)
-0.785
Length
149 amino acids
Sequence
(BLAST)
001: MAPKAEKKPA EKKPVEEKKS TVGDKAPAEK KPKAGKKLPK EGGAGGEGGK KKKRNKKSVE TYKIYIFKVL KQVHPDIGIS SKAMGIMNSF INDIFEKLAQ
101: ESSRLARYNK KPTITSREIQ TAVRLVLPGE LAKHAVSEGT KAVTKFTSS
Best Arabidopsis Sequence Match ( AT3G45980.1 )
(BLAST)
001: MAPRAEKKPA EKKPAAEKPV EEKSKAEKAP AEKKPKAGKK LPKEAGAGGD KKKKMKKKSV ETYKIYIFKV LKQVHPDIGI SSKAMGIMNS FINDIFEKLA
101: SESSKLARYN KKPTITSREI QTAVRLVLPG ELAKHAVSEG TKAVTKFTSS
Arabidopsis Description
H2BHistone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V9F6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.