Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH29831 Soybean nucleus 100.0 96.62
KRH29832 Soybean nucleus 100.0 96.62
KRH29836 Soybean nucleus 100.0 96.62
KRH24830 Soybean nucleus 100.0 95.97
KRH24831 Soybean nucleus 100.0 95.97
KRH24833 Soybean nucleus 100.0 95.97
GSMUA_Achr8P20900_001 Banana nucleus 44.06 95.45
GSMUA_Achr10P... Banana nucleus 42.66 92.42
VIT_06s0004g04250.t01 Wine grape nucleus 95.1 91.89
PGSC0003DMT400077939 Potato nucleus 93.01 91.1
TraesCS6D01G046500.1 Wheat nucleus 41.96 90.91
PGSC0003DMT400043578 Potato nucleus 89.51 90.78
TraesCS6B01G055300.1 Wheat nucleus 60.84 90.62
TraesCS6B01G055500.1 Wheat nucleus 60.84 90.62
KRG95819 Soybean nucleus 87.41 90.58
KRH67549 Soybean nucleus 87.41 90.58
Solyc06g075800.1.1 Tomato nucleus 92.31 90.41
VIT_06s0004g04230.t01 Wine grape nucleus 92.31 90.41
Solyc03g071620.1.1 Tomato nucleus 88.81 90.07
KRG92106 Soybean nucleus 85.31 89.71
TraesCS3A01G075800.1 Wheat nucleus 60.14 89.58
KRH26542 Soybean nucleus 83.92 89.55
KRH22818 Soybean nucleus 83.22 89.47
KRH19721 Soybean nucleus 86.71 89.21
TraesCS2A01G312400.1 Wheat nucleus 73.43 88.98
PGSC0003DMT400070382 Potato nucleus 89.51 88.89
TraesCS7B01G394800.1 Wheat nucleus 60.14 88.66
KRH34681 Soybean nucleus 84.62 88.32
Solyc11g007920.1.1 Tomato nucleus 88.81 88.19
VIT_06s0004g04300.t01 Wine grape nucleus 93.71 88.16
Solyc02g038690.1.1 Tomato nucleus 82.52 88.06
PGSC0003DMT400060096 Potato nucleus 90.21 87.76
Os05t0460475-00 Rice nucleus 65.03 87.74
PGSC0003DMT400022099 Potato nucleus 88.11 87.5
PGSC0003DMT400070383 Potato nucleus 86.71 87.32
GSMUA_Achr9P04060_001 Banana nucleus 71.33 87.18
PGSC0003DMT400074994 Potato nucleus 89.51 87.07
Solyc06g005390.1.1 Tomato nucleus 89.51 87.07
PGSC0003DMT400022074 Potato nucleus 87.41 86.81
Bra002436.1-P Field mustard nucleus 85.31 86.52
Bra006685.1-P Field mustard nucleus 85.31 86.52
CDX71064 Canola nucleus 85.31 86.52
CDX88732 Canola nucleus 85.31 86.52
CDY26964 Canola nucleus 85.31 86.52
Solyc05g055440.1.1 Tomato nucleus 88.81 86.39
Os01t0839500-00 Rice nucleus 83.92 86.33
Solyc12g013510.1.1 Tomato nucleus 83.92 86.33
CDX71019 Canola nucleus 85.31 85.92
AT1G07790.1 Thale cress nucleus 88.81 85.81
CDY15776 Canola nucleus 88.81 85.81
VIT_13s0019g05370.t01 Wine grape nucleus 86.71 85.52
AT2G28720.1 Thale cress nucleus 90.21 85.43
TraesCS7B01G394500.1 Wheat nucleus 57.34 85.42
TraesCS3D01G099000.1 Wheat nucleus 81.12 85.29
CDY71843 Canola nucleus 88.81 85.23
HORVU6Hr1G015790.1 Barley nucleus 80.42 85.19
TraesCS3B01G114600.1 Wheat nucleus 80.42 85.19
TraesCS6A01G086400.1 Wheat nucleus 80.42 85.19
TraesCS6B01G116000.1 Wheat nucleus 80.42 85.19
TraesCSU01G077200.1 Wheat nucleus 80.42 85.19
Solyc11g007930.1.1 Tomato nucleus 81.82 84.78
Bra011930.1-P Field mustard nucleus 88.11 84.56
TraesCS3A01G357500.1 Wheat nucleus 80.42 84.56
TraesCS3D01G351300.1 Wheat nucleus 80.42 84.56
TraesCS3D01G351400.1 Wheat nucleus 80.42 84.56
TraesCS6D01G046600.1 Wheat nucleus 80.42 84.56
TraesCS3B01G114400.1 Wheat nucleus 79.72 84.44
TraesCS6A01G086200.1 Wheat nucleus 79.72 84.44
TraesCSU01G077400.1 Wheat nucleus 79.72 84.44
TraesCS3A01G357400.1 Wheat nucleus 81.12 84.06
Bra006639.1-P Field mustard nucleus 84.62 84.03
CDX88779 Canola nucleus 84.62 84.03
Bra035677.1-P Field mustard nucleus 87.41 83.89
TraesCS3B01G390000.1 Wheat nucleus 79.72 83.82
TraesCS3D01G075900.1 Wheat nucleus 79.72 83.82
TraesCS6A01G040500.1 Wheat nucleus 79.72 83.82
TraesCS6D01G046200.1 Wheat nucleus, unclear 79.72 83.82
TraesCS3B01G390100.1 Wheat nucleus 79.02 83.7
AT5G22880.1 Thale cress nucleus 84.62 83.45
CDX95762 Canola nucleus 87.41 82.78
CDX92329 Canola nucleus 83.22 82.64
TraesCS3D01G342400.1 Wheat nucleus 79.72 82.61
EES03855 Sorghum nucleus 79.02 82.48
Zm00001d012423_P001 Maize plastid 79.02 82.48
Zm00001d042930_P001 Maize plastid 79.02 82.48
TraesCS1B01G294500.1 Wheat nucleus 85.31 82.43
CDY72471 Canola nucleus 88.11 82.35
TraesCS7A01G491000.1 Wheat nucleus 79.02 81.88
TraesCS7B01G394700.1 Wheat nucleus 79.02 81.88
CDX77199 Canola nucleus 88.11 81.82
TraesCS3D01G351500.1 Wheat nucleus 69.93 81.3
HORVU0Hr1G006420.1 Barley nucleus 78.32 81.16
HORVU3Hr1G034060.1 Barley nucleus 78.32 81.16
TraesCS7A01G490900.1 Wheat nucleus 78.32 81.16
TraesCS7B01G394600.1 Wheat nucleus 78.32 81.16
TraesCS7A01G491100.1 Wheat extracellular, nucleus, unclear 80.42 80.99
TraesCS7B01G394900.1 Wheat nucleus 80.42 80.99
TraesCS7D01G477300.1 Wheat nucleus 80.42 80.99
EES18353 Sorghum nucleus 83.22 80.95
TraesCS1A01G190400.1 Wheat nucleus 79.02 80.71
TraesCS6D01G046400.1 Wheat nucleus 79.02 80.71
Bra000483.1-P Field mustard nucleus 87.41 80.65
CDX83300 Canola nucleus 87.41 80.65
TraesCS6A01G040400.1 Wheat nucleus 78.32 80.58
TraesCS6A01G040200.1 Wheat nucleus 77.62 80.43
TraesCS7B01G394100.1 Wheat nucleus 77.62 80.43
TraesCS7B01G394400.1 Wheat nucleus 77.62 80.43
GSMUA_Achr2P19080_001 Banana nucleus 80.42 80.42
TraesCS4D01G205300.1 Wheat nucleus 79.72 80.28
TraesCS7D01G477400.1 Wheat nucleus 79.72 80.28
TraesCS4A01G030500.1 Wheat nucleus 79.02 80.14
EES00304 Sorghum nucleus 83.22 79.87
Zm00001d039821_P001 Maize plastid 83.22 79.87
TraesCS7B01G405800.1 Wheat nucleus 77.62 79.86
OQU92807 Sorghum nucleus 82.52 79.73
EES15460 Sorghum nucleus 84.62 79.61
EES00399 Sorghum nucleus 83.22 79.33
EES00305 Sorghum nucleus 82.52 79.19
TraesCS1B01G357600.1 Wheat nucleus 79.72 79.17
TraesCS1D01G396600.1 Wheat golgi, nucleus, unclear 82.52 78.67
Zm00001d011236_P001 Maize plastid 82.52 78.67
TraesCS3A01G102500.1 Wheat nucleus 79.02 78.47
TraesCS6A01G034500.1 Wheat nucleus 79.02 78.47
TraesCS6A01G035000.1 Wheat nucleus 79.02 78.47
TraesCS6B01G048800.1 Wheat nucleus 79.02 78.47
TraesCS6B01G049300.1 Wheat nucleus 79.02 78.47
TraesCS7D01G485700.1 Wheat nucleus 76.22 78.42
TraesCSU01G169300.1 Wheat nucleus 81.12 78.38
TraesCSU01G169400.1 Wheat nucleus 81.12 78.38
TraesCSU01G169500.1 Wheat nucleus 81.12 78.38
TraesCSU01G169700.1 Wheat nucleus 81.12 78.38
TraesCSU01G169800.1 Wheat nucleus 81.12 78.38
TraesCSU01G169900.1 Wheat nucleus 81.12 78.38
TraesCSU01G170400.1 Wheat nucleus 81.12 78.38
TraesCSU01G170500.1 Wheat nucleus 81.12 78.38
TraesCSU01G170600.1 Wheat nucleus 81.12 78.38
TraesCSU01G170700.1 Wheat nucleus 81.12 78.38
TraesCSU01G170900.1 Wheat nucleus 81.12 78.38
TraesCSU01G171000.1 Wheat nucleus 81.12 78.38
TraesCSU01G171100.1 Wheat nucleus 81.12 78.38
Zm00001d044247_P001 Maize plastid 81.12 78.38
Os03t0279000-00 Rice nucleus 83.22 78.29
TraesCS2D01G310800.1 Wheat nucleus 83.22 78.29
TraesCS6B01G048500.1 Wheat unclear 79.02 77.93
EER96770 Sorghum nucleus 83.22 77.78
TraesCS6B01G049100.1 Wheat nucleus 78.32 77.78
TraesCS6B01G082600.1 Wheat nucleus 78.32 77.78
TraesCS3D01G088900.1 Wheat nucleus 82.52 77.63
TraesCS1B01G416600.1 Wheat nucleus 81.82 77.48
Zm00001d020580_P001 Maize plastid 81.82 77.48
HORVU7Hr1G110290.1 Barley nucleus 55.24 77.45
EES07386 Sorghum nucleus 83.92 77.42
TraesCS6D01G040600.1 Wheat nucleus 78.32 77.24
TraesCS4A01G099900.1 Wheat nucleus 80.42 77.18
Os01t0153100-00 Rice nucleus 82.52 77.12
TraesCS1B01G244900.1 Wheat nucleus 81.82 76.97
TraesCS1B01G245300.1 Wheat nucleus 81.82 76.97
TraesCS4A01G260400.1 Wheat nucleus 81.82 76.97
TraesCS4D01G054200.1 Wheat nucleus 81.82 76.97
TraesCS5A01G384300.1 Wheat nucleus 81.82 76.97
TraesCS5B01G389100.1 Wheat nucleus 81.82 76.97
Zm00001d007084_P001 Maize plastid 81.82 76.97
EES15092 Sorghum nucleus 81.12 76.82
TraesCS3A01G088800.1 Wheat nucleus 81.12 76.82
HORVU6Hr1G087190.1 Barley nucleus 80.42 76.67
Zm00001d050100_P001 Maize plastid 80.42 76.67
Zm00001d051591_P001 Maize plastid 82.52 76.62
TraesCS6D01G040200.1 Wheat nucleus 77.62 76.55
TraesCS4B01G204400.1 Wheat nucleus 79.72 76.51
HORVU1Hr1G049920.1 Barley nucleus 81.82 76.47
OQU87075 Sorghum nucleus 81.82 76.47
Os01t0149600-01 Rice nucleus 81.82 76.47
Os01t0152900-00 Rice nucleus 81.82 76.47
TraesCS1A01G388600.1 Wheat nucleus 81.82 76.47
TraesCS1B01G192500.1 Wheat nucleus 81.82 76.47
Os05t0574300-00 Rice nucleus 81.12 76.32
TraesCS1A01G228700.1 Wheat nucleus 81.12 76.32
TraesCS1D01G233300.1 Wheat nucleus 81.12 76.32
TraesCS4B01G054200.1 Wheat nucleus 81.12 76.32
Zm00001d005789_P001 Maize plastid 81.12 76.32
EER97675 Sorghum nucleus 80.42 76.16
Zm00001d025913_P001 Maize plastid 79.72 76.0
Zm00001d032070_P001 Maize plastid 79.72 76.0
TraesCS4B01G275400.1 Wheat nucleus 81.82 75.97
TraesCS1A01G361600.1 Wheat nucleus 81.12 75.82
TraesCS1A01G367900.1 Wheat nucleus 81.12 75.82
TraesCS1A01G368000.1 Wheat nucleus 81.12 75.82
TraesCS1B01G378300.1 Wheat nucleus 81.12 75.82
TraesCS1B01G386400.1 Wheat nucleus 81.12 75.82
TraesCS1D01G366300.1 Wheat nucleus 81.12 75.82
TraesCS6B01G376900.1 Wheat nucleus 80.42 75.66
TraesCS3B01G390300.1 Wheat nucleus 70.63 75.37
TraesCS4A01G030400.1 Wheat nucleus 81.12 75.32
Os01t0152300-00 Rice nucleus 80.42 75.16
TraesCS1B01G386200.1 Wheat nucleus 80.42 75.16
TraesCS1B01G386600.1 Wheat nucleus 80.42 75.16
TraesCS1B01G386700.1 Wheat nucleus 80.42 75.16
TraesCS1D01G373800.1 Wheat nucleus 80.42 75.16
TraesCS1D01G373900.1 Wheat nucleus 80.42 75.16
TraesCS5D01G020000.1 Wheat nucleus 82.52 75.16
TraesCS5A01G051900.1 Wheat nucleus 81.82 75.0
TraesCS5B01G058200.1 Wheat nucleus 83.22 74.84
TraesCS5B01G064900.1 Wheat nucleus, unclear 83.22 74.84
HORVU6Hr1G005950.2 Barley nucleus 81.12 74.84
Os01t0153300-00 Rice nucleus 81.12 74.84
PGSC0003DMT400074020 Potato nucleus 70.63 74.81
TraesCS1B01G386500.1 Wheat nucleus 79.72 74.51
GSMUA_Achr7P15260_001 Banana nucleus 79.02 74.34
TraesCS6D01G326800.1 Wheat nucleus, unclear 79.72 74.03
TraesCS1D01G194600.1 Wheat nucleus 79.02 73.86
TraesCSU01G081100.1 Wheat nucleus 79.02 73.38
HORVU6Hr1G008320.1 Barley nucleus 80.42 73.25
TraesCS6B01G084900.1 Wheat nucleus 78.32 72.73
HORVU7Hr1G110130.1 Barley nucleus 59.44 72.03
TraesCS1D01G232900.1 Wheat nucleus 78.32 71.34
HORVU7Hr1G110330.2 Barley nucleus 58.74 70.59
HORVU6Hr1G015760.1 Barley nucleus, plastid 80.42 70.55
HORVU1Hr1G091370.1 Barley nucleus 78.32 70.44
HORVU7Hr1G110190.1 Barley nucleus 64.34 69.7
HORVU1Hr1G072190.4 Barley nucleus 85.31 69.32
HORVU4Hr1G070240.1 Barley nucleus 80.42 69.28
HORVU3Hr1G013530.1 Barley nucleus 79.02 68.9
HORVU7Hr1G110170.1 Barley nucleus 78.32 68.71
HORVU3Hr1G013680.1 Barley nucleus 79.72 67.06
HORVU4Hr1G009040.2 Barley nucleus 80.42 66.86
TraesCS5D01G393900.1 Wheat nucleus 76.22 66.46
Solyc10g044580.1.1 Tomato nucleus 62.24 65.93
HORVU2Hr1G077630.1 Barley nucleus 82.52 65.19
HORVU7Hr1G110090.1 Barley nucleus, plastid 78.32 64.74
HORVU1Hr1G058500.1 Barley nucleus 82.52 64.48
HORVU1Hr1G078480.6 Barley nucleus 81.12 64.44
HORVU1Hr1G078530.3 Barley nucleus 81.12 64.44
HORVU1Hr1G085540.1 Barley nucleus 80.42 64.25
HORVU6Hr1G006110.1 Barley nucleus, plastid 52.45 64.1
HORVU4Hr1G073130.1 Barley nucleus, plastid 81.82 63.93
HORVU6Hr1G083110.1 Barley nucleus 72.03 60.23
VIT_06s0004g04240.t01 Wine grape nucleus 93.71 58.26
HORVU3Hr1G015810.1 Barley nucleus, plastid 82.52 56.46
HORVU5Hr1G094500.1 Barley nucleus, plastid 82.52 55.66
HORVU1Hr1G056530.1 Barley nucleus, plastid 81.82 55.45
Os08t0490900-00 Rice nucleus 81.82 55.19
HORVU3Hr1G086580.1 Barley nucleus, plastid 69.23 53.8
HORVU3Hr1G086610.2 Barley nucleus 74.13 50.48
Zm00001d048491_P001 Maize plastid 83.22 50.0
HORVU1Hr1G066130.1 Barley nucleus 83.92 49.38
GSMUA_Achr6P33320_001 Banana nucleus 70.63 48.79
TraesCS6B01G081700.1 Wheat nucleus 51.75 45.12
TraesCS6D01G063200.1 Wheat nucleus 53.85 38.89
TraesCS6A01G061400.1 Wheat nucleus 53.15 36.36
KRH30545 Soybean mitochondrion, nucleus 48.25 34.67
KRH25129 Soybean nucleus 51.75 32.89
PGSC0003DMT400074018 Potato nucleus 61.54 23.1
Protein Annotations
Gene3D:1.10.20.10EntrezGene:100820177MapMan:12.1.3UniProt:A0A0R0HPZ5EMBL:ACUP02006828EnsemblPlantsGene:GLYMA_11G141800
GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005694GO:GO:0046982
InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2BInterPro:IPR009072EnsemblPlants:KRH29833ProteinID:KRH29833
ProteinID:KRH29833.1PFAM:PF00125PRINTS:PR00621ScanProsite:PS00357PANTHER:PTHR23428PANTHER:PTHR23428:SF97
SMART:SM00427SUPFAM:SSF47113UniParc:UPI0001817F98SEG:seg::
Description
hypothetical protein
Coordinates
chr11:+:10825602..10826647
Molecular Weight (calculated)
15640.2 Da
IEP (calculated)
10.824
GRAVY (calculated)
-0.754
Length
143 amino acids
Sequence
(BLAST)
001: MAPKAEKKPA EEKKSTVGDK APAEKKPKAG KKLPKEGGAG GEGKKKKRNK KSVETYKIYI FKVLKQVHPD IGISSKAMGI MNSFINDIFE KLAQESSRLA
101: RYNKKPTITS REIQTAVRLV LPGELAKHAV SEGTKAVTKF TSS
Best Arabidopsis Sequence Match ( AT2G28720.1 )
(BLAST)
001: MAPKAGKKPA EKKPAEKAPA EEEKVAEKAP AEKKPKAGKK LPKEAVTGGV EKKKKRVKKS TETYKIYIFK VLKQVHPDIG ISSKAMGIMN SFINDIFEKL
101: AQEASKLARY NKKPTITSRE IQTAVRLVLP GELAKHAVSE GTKAVTKFTS S
Arabidopsis Description
Histone H2B.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI96]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.