Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g04230.t01 | Wine grape | nucleus | 95.27 | 96.58 |
| PGSC0003DMT400043578 | Potato | nucleus | 91.89 | 96.45 |
| Solyc03g071620.1.1 | Tomato | nucleus | 91.22 | 95.74 |
| GSMUA_Achr8P20900_001 | Banana | nucleus | 42.57 | 95.45 |
| KRH29831 | Soybean | nucleus | 95.27 | 95.27 |
| KRH29832 | Soybean | nucleus | 95.27 | 95.27 |
| KRH29836 | Soybean | nucleus | 95.27 | 95.27 |
| PGSC0003DMT400077939 | Potato | nucleus | 93.92 | 95.21 |
| KRH29833 | Soybean | nucleus | 91.89 | 95.1 |
| KRH24831 | Soybean | nucleus | 95.27 | 94.63 |
| KRH24833 | Soybean | nucleus | 95.27 | 94.63 |
| Solyc06g075800.1.1 | Tomato | nucleus | 93.24 | 94.52 |
| KRH24830 | Soybean | nucleus | 94.59 | 93.96 |
| PGSC0003DMT400060096 | Potato | nucleus | 93.24 | 93.88 |
| PGSC0003DMT400070382 | Potato | nucleus | 91.22 | 93.75 |
| GSMUA_Achr9P04060_001 | Banana | nucleus | 73.65 | 93.16 |
| Solyc11g007920.1.1 | Tomato | nucleus | 90.54 | 93.06 |
| VIT_06s0004g04300.t01 | Wine grape | nucleus | 95.27 | 92.76 |
| GSMUA_Achr10P... | Banana | nucleus | 41.22 | 92.42 |
| Solyc05g055440.1.1 | Tomato | nucleus | 91.22 | 91.84 |
| VIT_13s0019g05370.t01 | Wine grape | nucleus | 89.86 | 91.72 |
| TraesCS6B01G055300.1 | Wheat | nucleus | 59.46 | 91.67 |
| TraesCS6B01G055500.1 | Wheat | nucleus | 59.46 | 91.67 |
| TraesCS6D01G046500.1 | Wheat | nucleus | 40.54 | 90.91 |
| TraesCS7B01G394800.1 | Wheat | nucleus | 59.46 | 90.72 |
| TraesCS3A01G075800.1 | Wheat | nucleus | 58.78 | 90.62 |
| Os05t0460475-00 | Rice | nucleus | 64.19 | 89.62 |
| PGSC0003DMT400074994 | Potato | nucleus | 88.51 | 89.12 |
| Solyc06g005390.1.1 | Tomato | nucleus | 88.51 | 89.12 |
| TraesCS3A01G357500.1 | Wheat | nucleus | 81.08 | 88.24 |
| TraesCS3D01G351300.1 | Wheat | nucleus | 81.08 | 88.24 |
| TraesCS3D01G351400.1 | Wheat | nucleus | 81.08 | 88.24 |
| TraesCS1B01G294500.1 | Wheat | nucleus | 87.84 | 87.84 |
| Os01t0839500-00 | Rice | nucleus | 82.43 | 87.77 |
| TraesCS3B01G390000.1 | Wheat | nucleus | 80.41 | 87.5 |
| TraesCS7B01G394500.1 | Wheat | nucleus | 56.76 | 87.5 |
| TraesCS3B01G390100.1 | Wheat | nucleus | 79.73 | 87.41 |
| TraesCS2A01G312400.1 | Wheat | nucleus | 69.59 | 87.29 |
| TraesCS3A01G357400.1 | Wheat | nucleus | 81.08 | 86.96 |
| HORVU6Hr1G015790.1 | Barley | nucleus | 79.05 | 86.67 |
| TraesCS6A01G086400.1 | Wheat | nucleus | 79.05 | 86.67 |
| TraesCS6B01G116000.1 | Wheat | nucleus | 79.05 | 86.67 |
| TraesCSU01G077200.1 | Wheat | nucleus | 79.05 | 86.67 |
| TraesCS6A01G086200.1 | Wheat | nucleus | 78.38 | 85.93 |
| TraesCSU01G077400.1 | Wheat | nucleus | 78.38 | 85.93 |
| EES03855 | Sorghum | nucleus | 79.05 | 85.4 |
| Zm00001d012423_P001 | Maize | plastid | 79.05 | 85.4 |
| GSMUA_Achr2P19080_001 | Banana | nucleus | 82.43 | 85.31 |
| TraesCS3D01G075900.1 | Wheat | nucleus | 78.38 | 85.29 |
| TraesCS3D01G099000.1 | Wheat | nucleus | 78.38 | 85.29 |
| TraesCS6D01G046200.1 | Wheat | nucleus, unclear | 78.38 | 85.29 |
| TraesCS3B01G114600.1 | Wheat | nucleus | 77.7 | 85.19 |
| Zm00001d042930_P001 | Maize | plastid | 78.38 | 84.67 |
| TraesCS6A01G040500.1 | Wheat | nucleus | 77.7 | 84.56 |
| TraesCS6D01G046600.1 | Wheat | nucleus | 77.7 | 84.56 |
| EES18353 | Sorghum | nucleus | 83.78 | 84.35 |
| EES00304 | Sorghum | nucleus | 84.46 | 83.89 |
| TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 80.41 | 83.8 |
| TraesCS7B01G394900.1 | Wheat | nucleus | 80.41 | 83.8 |
| TraesCS7D01G477300.1 | Wheat | nucleus | 80.41 | 83.8 |
| TraesCS3B01G114400.1 | Wheat | nucleus | 76.35 | 83.7 |
| Os03t0279000-00 | Rice | nucleus | 85.81 | 83.55 |
| TraesCS7B01G405800.1 | Wheat | nucleus | 78.38 | 83.45 |
| EES00399 | Sorghum | nucleus | 84.46 | 83.33 |
| EES00305 | Sorghum | nucleus | 83.78 | 83.22 |
| Zm00001d039821_P001 | Maize | plastid | 83.78 | 83.22 |
| OQU92807 | Sorghum | nucleus | 83.11 | 83.11 |
| TraesCSU01G169300.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G169400.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G169500.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G169700.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G169800.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G169900.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G170400.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G170500.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G170600.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G170700.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G170900.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G171000.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCSU01G171100.1 | Wheat | nucleus | 83.11 | 83.11 |
| TraesCS4D01G205300.1 | Wheat | nucleus | 79.73 | 83.1 |
| TraesCS7D01G477400.1 | Wheat | nucleus | 79.73 | 83.1 |
| TraesCS3D01G342400.1 | Wheat | nucleus | 77.03 | 82.61 |
| TraesCS7A01G491000.1 | Wheat | nucleus | 77.03 | 82.61 |
| TraesCS7B01G394700.1 | Wheat | nucleus | 77.03 | 82.61 |
| EES15460 | Sorghum | nucleus | 84.46 | 82.24 |
| Zm00001d011236_P001 | Maize | plastid | 83.11 | 82.0 |
| HORVU0Hr1G006420.1 | Barley | nucleus | 76.35 | 81.88 |
| HORVU3Hr1G034060.1 | Barley | nucleus | 76.35 | 81.88 |
| TraesCS7A01G490900.1 | Wheat | nucleus | 76.35 | 81.88 |
| TraesCS7B01G394600.1 | Wheat | nucleus | 76.35 | 81.88 |
| Zm00001d044247_P001 | Maize | plastid | 81.76 | 81.76 |
| EER96770 | Sorghum | nucleus | 84.46 | 81.7 |
| TraesCS3D01G088900.1 | Wheat | nucleus | 83.78 | 81.58 |
| TraesCS5A01G384300.1 | Wheat | nucleus | 83.78 | 81.58 |
| Zm00001d007084_P001 | Maize | plastid | 83.78 | 81.58 |
| TraesCS1A01G190400.1 | Wheat | nucleus | 77.03 | 81.43 |
| HORVU7Hr1G110290.1 | Barley | nucleus | 56.08 | 81.37 |
| TraesCS3D01G351500.1 | Wheat | nucleus | 67.57 | 81.3 |
| TraesCS4A01G099900.1 | Wheat | nucleus | 81.76 | 81.21 |
| TraesCS6A01G040200.1 | Wheat | nucleus | 75.68 | 81.16 |
| TraesCS7B01G394100.1 | Wheat | nucleus | 75.68 | 81.16 |
| TraesCS7B01G394400.1 | Wheat | nucleus | 75.68 | 81.16 |
| TraesCS2D01G310800.1 | Wheat | nucleus | 83.11 | 80.92 |
| TraesCS4A01G260400.1 | Wheat | nucleus | 83.11 | 80.92 |
| TraesCS4D01G054200.1 | Wheat | nucleus | 83.11 | 80.92 |
| TraesCS5B01G389100.1 | Wheat | nucleus | 83.11 | 80.92 |
| TraesCS3A01G088800.1 | Wheat | nucleus | 82.43 | 80.79 |
| Zm00001d020580_P001 | Maize | plastid | 82.43 | 80.79 |
| TraesCS6D01G046400.1 | Wheat | nucleus | 76.35 | 80.71 |
| Zm00001d050100_P001 | Maize | plastid | 81.76 | 80.67 |
| TraesCS6A01G040400.1 | Wheat | nucleus | 75.68 | 80.58 |
| TraesCS7D01G485700.1 | Wheat | nucleus | 75.68 | 80.58 |
| TraesCS4B01G204400.1 | Wheat | nucleus | 81.08 | 80.54 |
| Zm00001d051591_P001 | Maize | plastid | 83.78 | 80.52 |
| Os01t0153100-00 | Rice | nucleus | 83.11 | 80.39 |
| Os05t0574300-00 | Rice | nucleus | 82.43 | 80.26 |
| Zm00001d005789_P001 | Maize | plastid | 82.43 | 80.26 |
| TraesCS4A01G030500.1 | Wheat | nucleus | 76.35 | 80.14 |
| EES15092 | Sorghum | nucleus | 81.76 | 80.13 |
| EES07386 | Sorghum | nucleus | 83.78 | 80.0 |
| HORVU6Hr1G087190.1 | Barley | nucleus | 81.08 | 80.0 |
| Zm00001d025913_P001 | Maize | plastid | 81.08 | 80.0 |
| Zm00001d032070_P001 | Maize | plastid | 81.08 | 80.0 |
| HORVU1Hr1G049920.1 | Barley | nucleus | 82.43 | 79.74 |
| OQU87075 | Sorghum | nucleus | 82.43 | 79.74 |
| Os01t0149600-01 | Rice | nucleus | 82.43 | 79.74 |
| Os01t0152900-00 | Rice | nucleus | 82.43 | 79.74 |
| TraesCS1B01G192500.1 | Wheat | nucleus | 82.43 | 79.74 |
| TraesCS5D01G020000.1 | Wheat | nucleus | 84.46 | 79.62 |
| TraesCS1B01G244900.1 | Wheat | nucleus | 81.76 | 79.61 |
| TraesCS1B01G245300.1 | Wheat | nucleus | 81.76 | 79.61 |
| TraesCS4B01G054200.1 | Wheat | nucleus | 81.76 | 79.61 |
| TraesCS4B01G275400.1 | Wheat | nucleus | 82.43 | 79.22 |
| TraesCS1B01G357600.1 | Wheat | nucleus | 77.03 | 79.17 |
| GSMUA_Achr7P15260_001 | Banana | nucleus | 81.08 | 78.95 |
| TraesCS1A01G228700.1 | Wheat | nucleus | 81.08 | 78.95 |
| TraesCS1D01G233300.1 | Wheat | nucleus | 81.08 | 78.95 |
| EER97675 | Sorghum | nucleus | 80.41 | 78.81 |
| TraesCS1D01G396600.1 | Wheat | golgi, nucleus, unclear | 79.73 | 78.67 |
| TraesCS6B01G048500.1 | Wheat | unclear | 77.03 | 78.62 |
| TraesCS4A01G030400.1 | Wheat | nucleus | 81.76 | 78.57 |
| TraesCS3A01G102500.1 | Wheat | nucleus | 76.35 | 78.47 |
| TraesCS6A01G034500.1 | Wheat | nucleus | 76.35 | 78.47 |
| TraesCS6A01G035000.1 | Wheat | nucleus | 76.35 | 78.47 |
| TraesCS6B01G048800.1 | Wheat | nucleus | 76.35 | 78.47 |
| TraesCS6B01G049100.1 | Wheat | nucleus | 76.35 | 78.47 |
| TraesCS6B01G049300.1 | Wheat | nucleus | 76.35 | 78.47 |
| Os01t0152300-00 | Rice | nucleus | 81.08 | 78.43 |
| Os01t0153300-00 | Rice | nucleus | 81.76 | 78.06 |
| TraesCS6B01G082600.1 | Wheat | nucleus | 75.68 | 77.78 |
| TraesCS3B01G390300.1 | Wheat | nucleus | 70.27 | 77.61 |
| TraesCS1B01G416600.1 | Wheat | nucleus | 79.05 | 77.48 |
| TraesCS6D01G040600.1 | Wheat | nucleus | 75.68 | 77.24 |
| TraesCS1D01G194600.1 | Wheat | nucleus | 79.73 | 77.12 |
| TraesCS5B01G058200.1 | Wheat | nucleus | 82.43 | 76.73 |
| TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 82.43 | 76.73 |
| TraesCS6D01G040200.1 | Wheat | nucleus | 75.0 | 76.55 |
| TraesCS1A01G388600.1 | Wheat | nucleus | 79.05 | 76.47 |
| TraesCS5A01G051900.1 | Wheat | nucleus | 80.41 | 76.28 |
| TraesCS1A01G361600.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1A01G367900.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1A01G368000.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1B01G386200.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1B01G386400.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1B01G386700.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1D01G366300.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1D01G373800.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1D01G373900.1 | Wheat | nucleus | 78.38 | 75.82 |
| TraesCS1D01G232900.1 | Wheat | nucleus | 80.41 | 75.8 |
| TraesCS6B01G376900.1 | Wheat | nucleus | 77.7 | 75.66 |
| TraesCS6B01G084900.1 | Wheat | nucleus | 78.38 | 75.32 |
| TraesCS1B01G378300.1 | Wheat | nucleus | 77.7 | 75.16 |
| TraesCS1B01G386500.1 | Wheat | nucleus | 77.7 | 75.16 |
| TraesCS1B01G386600.1 | Wheat | nucleus | 77.7 | 75.16 |
| HORVU6Hr1G005950.2 | Barley | nucleus | 78.38 | 74.84 |
| TraesCS6D01G326800.1 | Wheat | nucleus, unclear | 77.03 | 74.03 |
| HORVU1Hr1G072190.4 | Barley | nucleus | 87.84 | 73.86 |
| HORVU7Hr1G110130.1 | Barley | nucleus | 58.78 | 73.73 |
| TraesCSU01G081100.1 | Wheat | nucleus | 76.35 | 73.38 |
| HORVU6Hr1G008320.1 | Barley | nucleus | 77.7 | 73.25 |
| HORVU1Hr1G091370.1 | Barley | nucleus | 77.7 | 72.33 |
| HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 79.05 | 71.78 |
| HORVU7Hr1G110330.2 | Barley | nucleus | 57.43 | 71.43 |
| HORVU4Hr1G070240.1 | Barley | nucleus | 79.05 | 70.48 |
| HORVU3Hr1G013530.1 | Barley | nucleus | 77.7 | 70.12 |
| TraesCS5D01G393900.1 | Wheat | nucleus | 77.7 | 70.12 |
| HORVU4Hr1G009040.2 | Barley | nucleus | 81.08 | 69.77 |
| HORVU7Hr1G110190.1 | Barley | nucleus | 62.16 | 69.7 |
| HORVU7Hr1G110170.1 | Barley | nucleus | 76.35 | 69.33 |
| HORVU3Hr1G013680.1 | Barley | nucleus | 78.38 | 68.24 |
| HORVU2Hr1G077630.1 | Barley | nucleus | 82.43 | 67.4 |
| HORVU1Hr1G058500.1 | Barley | nucleus | 82.43 | 66.67 |
| HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 82.43 | 66.67 |
| HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 52.03 | 65.81 |
| HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 76.35 | 65.32 |
| HORVU1Hr1G078480.6 | Barley | nucleus | 79.05 | 65.0 |
| HORVU1Hr1G078530.3 | Barley | nucleus | 79.05 | 65.0 |
| HORVU1Hr1G085540.1 | Barley | nucleus | 78.38 | 64.8 |
| HORVU6Hr1G083110.1 | Barley | nucleus | 72.3 | 62.57 |
| VIT_06s0004g04240.t01 | Wine grape | nucleus | 96.62 | 62.17 |
| HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 83.11 | 58.02 |
| Os08t0490900-00 | Rice | nucleus | 83.11 | 58.02 |
| HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 81.76 | 57.89 |
| HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 81.76 | 57.35 |
| HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 68.92 | 55.43 |
| HORVU3Hr1G086610.2 | Barley | nucleus | 75.0 | 52.86 |
| GSMUA_Achr6P33320_001 | Banana | nucleus | 72.3 | 51.69 |
| Zm00001d048491_P001 | Maize | plastid | 83.11 | 51.68 |
| HORVU1Hr1G066130.1 | Barley | nucleus | 83.78 | 51.03 |
| TraesCS6B01G081700.1 | Wheat | nucleus | 53.38 | 48.17 |
| TraesCS6D01G063200.1 | Wheat | nucleus | 55.41 | 41.41 |
| TraesCS6A01G061400.1 | Wheat | nucleus | 54.73 | 38.76 |
| VIT_06s0061g00870.t01 | Wine grape | nucleus | 49.32 | 33.8 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100258812 | wikigene:100258812 | MapMan:12.1.3 | ProteinID:CCB43598 | ProteinID:CCB43598.1 |
| UniProt:F6GV39 | EMBL:FN594951 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005694 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 |
| EntrezGene:LOC100258812 | wikigene:LOC100258812 | PFAM:PF00125 | PRINTS:PR00621 | ScanProsite:PS00357 | PANTHER:PTHR23428 |
| PANTHER:PTHR23428:SF97 | SMART:SM00427 | SUPFAM:SSF47113 | TIGR:TC53419 | UniParc:UPI0001983655 | ArrayExpress:VIT_06s0004g04250 |
| EnsemblPlantsGene:VIT_06s0004g04250 | EnsemblPlants:VIT_06s0004g04250.t01 | RefSeq:XP_002284332 | RefSeq:XP_002284332.1 | RefSeq:XP_019076063.1 | SEG:seg |
Description
Histone H2B [Source:UniProtKB/TrEMBL;Acc:F6GV39]
Coordinates
chr6:+:5194708..5195356
Molecular Weight (calculated)
16234.9 Da
IEP (calculated)
10.822
GRAVY (calculated)
-0.778
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKAEKKPA EKKPAEEKKS TVAEKAPAEK KPKAGKKLPK EGGAGPGDKK KKRTKKSVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSRLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
101: SSRLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
001: MAPRAEKKPA EKKPAAEKPV EEKSKAEKAP AEKKPKAGKK LPKEAGAGGD KKKKMKKKSV ETYKIYIFKV LKQVHPDIGI SSKAMGIMNS FINDIFEKLA
101: SESSKLARYN KKPTITSREI QTAVRLVLPG ELAKHAVSEG TKAVTKFTSS
101: SESSKLARYN KKPTITSREI QTAVRLVLPG ELAKHAVSEG TKAVTKFTSS
Arabidopsis Description
H2BHistone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V9F6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.