Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G055300.1 | Wheat | nucleus | 68.15 | 95.83 |
| TraesCS6B01G055500.1 | Wheat | nucleus | 68.15 | 95.83 |
| TraesCS3D01G099000.1 | Wheat | nucleus | 94.81 | 94.12 |
| TraesCS3B01G114600.1 | Wheat | nucleus | 94.07 | 94.07 |
| TraesCS7B01G394800.1 | Wheat | nucleus | 66.67 | 92.78 |
| TraesCS7B01G394500.1 | Wheat | nucleus | 65.93 | 92.71 |
| TraesCS6B01G116000.1 | Wheat | nucleus | 92.59 | 92.59 |
| TraesCS7B01G394100.1 | Wheat | nucleus | 91.11 | 89.13 |
| TraesCS7B01G394400.1 | Wheat | nucleus | 91.11 | 89.13 |
| TraesCS7B01G394700.1 | Wheat | nucleus | 91.11 | 89.13 |
| TraesCS7B01G394600.1 | Wheat | nucleus | 90.37 | 88.41 |
| TraesCS7B01G405800.1 | Wheat | nucleus | 89.63 | 87.05 |
| TraesCS7B01G394900.1 | Wheat | nucleus | 89.63 | 85.21 |
| TraesCS1B01G357600.1 | Wheat | nucleus | 90.37 | 84.72 |
| GSMUA_Achr9P04060_001 | Banana | nucleus | 73.33 | 84.62 |
| TraesCS3B01G390000.1 | Wheat | nucleus | 85.19 | 84.56 |
| TraesCS3B01G390100.1 | Wheat | nucleus | 84.44 | 84.44 |
| TraesCS6B01G048800.1 | Wheat | nucleus | 89.63 | 84.03 |
| TraesCS6B01G049100.1 | Wheat | nucleus | 89.63 | 84.03 |
| TraesCS6B01G049300.1 | Wheat | nucleus | 89.63 | 84.03 |
| KRH26542 | Soybean | nucleus | 82.96 | 83.58 |
| KRH22818 | Soybean | nucleus | 82.22 | 83.46 |
| TraesCS6B01G048500.1 | Wheat | unclear | 89.63 | 83.45 |
| TraesCS6B01G082600.1 | Wheat | nucleus | 88.89 | 83.33 |
| Bra003150.1-P | Field mustard | nucleus | 84.44 | 82.61 |
| Bra038267.1-P | Field mustard | nucleus | 83.7 | 82.48 |
| KRG92106 | Soybean | nucleus | 82.96 | 82.35 |
| Bra007018.1-P | Field mustard | nucleus | 83.7 | 81.88 |
| Bra039810.1-P | Field mustard | nucleus | 83.7 | 81.88 |
| KRG95819 | Soybean | nucleus | 83.7 | 81.88 |
| KRH67549 | Soybean | nucleus | 83.7 | 81.88 |
| AT2G37470.1 | Thale cress | nucleus | 82.96 | 81.16 |
| AT5G02570.1 | Thale cress | nucleus | 79.26 | 81.06 |
| KRH19721 | Soybean | nucleus | 82.96 | 80.58 |
| EES00304 | Sorghum | nucleus | 88.89 | 80.54 |
| TraesCS4B01G204400.1 | Wheat | nucleus | 88.89 | 80.54 |
| AT3G53650.1 | Thale cress | nucleus | 82.22 | 80.43 |
| KRH34681 | Soybean | nucleus | 81.48 | 80.29 |
| AT3G09480.1 | Thale cress | nucleus | 74.81 | 80.16 |
| EES00305 | Sorghum | nucleus | 88.15 | 79.87 |
| Zm00001d039821_P001 | Maize | plastid | 88.15 | 79.87 |
| KRH29833 | Soybean | nucleus | 84.44 | 79.72 |
| PGSC0003DMT400043578 | Potato | nucleus | 82.96 | 79.43 |
| EES00399 | Sorghum | nucleus | 88.15 | 79.33 |
| AT3G46030.1 | Thale cress | nucleus | 85.19 | 79.31 |
| TraesCS1B01G294500.1 | Wheat | nucleus | 86.67 | 79.05 |
| EES15460 | Sorghum | nucleus | 88.89 | 78.95 |
| Bra006685.1-P | Field mustard | nucleus | 82.22 | 78.72 |
| Solyc03g071620.1.1 | Tomato | nucleus | 82.22 | 78.72 |
| TraesCS1B01G244900.1 | Wheat | nucleus | 88.15 | 78.29 |
| TraesCS1B01G245300.1 | Wheat | nucleus | 88.15 | 78.29 |
| TraesCS5B01G389100.1 | Wheat | nucleus | 88.15 | 78.29 |
| TraesCS6B01G376900.1 | Wheat | nucleus | 88.15 | 78.29 |
| Bra020275.1-P | Field mustard | nucleus | 82.22 | 78.17 |
| PGSC0003DMT400070383 | Potato | nucleus | 82.22 | 78.17 |
| TraesCS1B01G416600.1 | Wheat | nucleus | 87.41 | 78.15 |
| PGSC0003DMT400077939 | Potato | nucleus | 84.44 | 78.08 |
| Solyc11g066430.1.1 | Tomato | nucleus | 80.74 | 77.86 |
| TraesCS1B01G192500.1 | Wheat | nucleus | 88.15 | 77.78 |
| TraesCS4B01G054200.1 | Wheat | nucleus | 87.41 | 77.63 |
| Solyc02g038690.1.1 | Tomato | nucleus | 77.04 | 77.61 |
| TraesCS3B01G390300.1 | Wheat | nucleus | 77.04 | 77.61 |
| PGSC0003DMT400074994 | Potato | nucleus | 84.44 | 77.55 |
| Solyc06g005390.1.1 | Tomato | nucleus | 84.44 | 77.55 |
| Solyc06g074790.1.1 | Tomato | nucleus | 81.48 | 77.46 |
| Solyc06g075800.1.1 | Tomato | nucleus | 83.7 | 77.4 |
| Bra002520.1-P | Field mustard | nucleus | 85.93 | 77.33 |
| Bra002436.1-P | Field mustard | nucleus | 80.74 | 77.31 |
| TraesCS4B01G275400.1 | Wheat | nucleus | 88.15 | 77.27 |
| TraesCS1B01G378300.1 | Wheat | nucleus | 87.41 | 77.12 |
| TraesCS1B01G386200.1 | Wheat | nucleus | 87.41 | 77.12 |
| TraesCS1B01G386400.1 | Wheat | nucleus | 87.41 | 77.12 |
| TraesCS1B01G386600.1 | Wheat | nucleus | 87.41 | 77.12 |
| TraesCS1B01G386700.1 | Wheat | nucleus | 87.41 | 77.12 |
| PGSC0003DMT400022074 | Potato | nucleus | 82.22 | 77.08 |
| PGSC0003DMT400022099 | Potato | nucleus | 82.22 | 77.08 |
| KRH29831 | Soybean | nucleus | 84.44 | 77.03 |
| KRH29832 | Soybean | nucleus | 84.44 | 77.03 |
| KRH29836 | Soybean | nucleus | 84.44 | 77.03 |
| Solyc11g007930.1.1 | Tomato | nucleus | 78.52 | 76.81 |
| PGSC0003DMT400018456 | Potato | nucleus | 80.74 | 76.76 |
| AT5G22880.1 | Thale cress | nucleus | 82.22 | 76.55 |
| KRH24830 | Soybean | nucleus | 84.44 | 76.51 |
| KRH24831 | Soybean | nucleus | 84.44 | 76.51 |
| KRH24833 | Soybean | nucleus | 84.44 | 76.51 |
| TraesCS1B01G386500.1 | Wheat | nucleus | 86.67 | 76.47 |
| PGSC0003DMT400070382 | Potato | nucleus | 81.48 | 76.39 |
| Solyc11g007920.1.1 | Tomato | nucleus | 81.48 | 76.39 |
| AT1G07790.1 | Thale cress | nucleus | 83.7 | 76.35 |
| VIT_06s0004g04250.t01 | Wine grape | nucleus | 83.7 | 76.35 |
| GSMUA_Achr2P19080_001 | Banana | nucleus | 80.74 | 76.22 |
| PGSC0003DMT400060096 | Potato | nucleus | 82.96 | 76.19 |
| Solyc05g055440.1.1 | Tomato | nucleus | 82.96 | 76.19 |
| PGSC0003DMT400001108 | Potato | nucleus | 80.0 | 76.06 |
| VIT_06s0004g04230.t01 | Wine grape | nucleus | 82.22 | 76.03 |
| AT3G45980.1 | Thale cress | nucleus | 84.44 | 76.0 |
| AT5G59910.1 | Thale cress | nucleus | 84.44 | 76.0 |
| Bra006639.1-P | Field mustard | nucleus | 80.74 | 75.69 |
| Solyc12g013510.1.1 | Tomato | nucleus | 77.78 | 75.54 |
| Bra035677.1-P | Field mustard | nucleus | 82.96 | 75.17 |
| HORVU1Hr1G091370.1 | Barley | nucleus | 88.15 | 74.84 |
| AT2G28720.1 | Thale cress | nucleus | 83.7 | 74.83 |
| Solyc06g074780.1.1 | Tomato | nucleus | 79.26 | 74.83 |
| TraesCS6B01G084900.1 | Wheat | nucleus | 85.19 | 74.68 |
| VIT_13s0019g05370.t01 | Wine grape | nucleus | 80.0 | 74.48 |
| TraesCS5B01G058200.1 | Wheat | nucleus | 87.41 | 74.21 |
| TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 87.41 | 74.21 |
| Bra011930.1-P | Field mustard | nucleus | 81.48 | 73.83 |
| VIT_06s0004g04300.t01 | Wine grape | nucleus | 82.96 | 73.68 |
| PGSC0003DMT400018455 | Potato | nucleus | 77.78 | 73.43 |
| GSMUA_Achr7P15260_001 | Banana | nucleus | 80.74 | 71.71 |
| Bra000483.1-P | Field mustard | nucleus | 82.22 | 71.61 |
| PGSC0003DMT400074020 | Potato | nucleus | 68.89 | 68.89 |
| CDX71015 | Canola | nucleus | 31.11 | 63.64 |
| Solyc10g044580.1.1 | Tomato | nucleus | 59.26 | 59.26 |
| Zm00001d048491_P001 | Maize | plastid | 88.15 | 50.0 |
| VIT_06s0004g04240.t01 | Wine grape | nucleus | 82.96 | 48.7 |
| GSMUA_Achr6P33320_001 | Banana | nucleus | 71.85 | 46.86 |
| TraesCS6B01G081700.1 | Wheat | nucleus | 55.56 | 45.73 |
| PGSC0003DMT400074018 | Potato | nucleus | 59.26 | 21.0 |
| TraesCS4B01G002800.1 | Wheat | nucleus | 45.93 | 20.2 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.3 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0046982 |
| InterPro:Histone-fold | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B | InterPro:IPR009072 | PFAM:PF00125 | PRINTS:PR00621 |
| ScanProsite:PS00357 | PANTHER:PTHR23428 | PANTHER:PTHR23428:SF62 | SMART:SM00427 | SUPFAM:SSF47113 | EnsemblPlantsGene:TraesCS3B01G114400 |
| EnsemblPlants:TraesCS3B01G114400.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:80200723..80201401
Molecular Weight (calculated)
14817.2 Da
IEP (calculated)
10.826
GRAVY (calculated)
-0.643
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKAAEKKP VEKTPAVKKP KAEKKVPTSK EGGEKKGKKK SKKSMETYKI YIFKVLKQVH PDIGISSKAM SITNSFINDI FEKLAGESAK LARYNKKPTI
101: TSREIQTSVR LVLPGELAKH AVSEGTKAVT KFTSA
101: TSREIQTSVR LVLPGELAKH AVSEGTKAVT KFTSA
001: MAPKAGKKPA EKKPAEKAPA EEEKVAEKAP AEKKPKAGKK LPKEAVTGGV EKKKKRVKKS TETYKIYIFK VLKQVHPDIG ISSKAMGIMN SFINDIFEKL
101: AQEASKLARY NKKPTITSRE IQTAVRLVLP GELAKHAVSE GTKAVTKFTS S
101: AQEASKLARY NKKPTITSRE IQTAVRLVLP GELAKHAVSE GTKAVTKFTS S
Arabidopsis Description
Histone H2B.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI96]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.