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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002436.1-P Field mustard nucleus 93.1 95.74
CDY26964 Canola nucleus 93.1 95.74
CDX71019 Canola nucleus 92.41 94.37
TraesCS6D01G046500.1 Wheat nucleus 42.76 93.94
Bra006639.1-P Field mustard nucleus 93.1 93.75
CDX88779 Canola nucleus 93.1 93.75
GSMUA_Achr8P20900_001 Banana nucleus 42.07 92.42
CDX92329 Canola nucleus 91.03 91.67
GSMUA_Achr10P... Banana nucleus 41.38 90.91
TraesCS6B01G055300.1 Wheat nucleus 59.31 89.58
TraesCS6B01G055500.1 Wheat nucleus 59.31 89.58
PGSC0003DMT400070383 Potato nucleus 87.59 89.44
AT1G07790.1 Thale cress nucleus 91.03 89.19
GSMUA_Achr9P04060_001 Banana nucleus 71.72 88.89
TraesCS7B01G394800.1 Wheat nucleus 59.31 88.66
TraesCS3A01G075800.1 Wheat nucleus 58.62 88.54
PGSC0003DMT400022099 Potato nucleus 87.59 88.19
Solyc02g038690.1.1 Tomato nucleus 81.38 88.06
Solyc12g013510.1.1 Tomato nucleus 84.14 87.77
Solyc11g007930.1.1 Tomato nucleus 83.45 87.68
PGSC0003DMT400022074 Potato nucleus 86.9 87.5
AT3G46030.1 Thale cress nucleus 86.9 86.9
TraesCS3A01G357500.1 Wheat nucleus 81.38 86.76
TraesCS3D01G351300.1 Wheat nucleus 81.38 86.76
TraesCS3D01G351400.1 Wheat nucleus 81.38 86.76
TraesCS7B01G394500.1 Wheat nucleus 57.24 86.46
TraesCS2A01G312400.1 Wheat nucleus 70.34 86.44
TraesCS3B01G390000.1 Wheat nucleus 80.69 86.03
TraesCS3B01G390100.1 Wheat nucleus 80.0 85.93
Os05t0460475-00 Rice nucleus 62.76 85.85
VIT_13s0019g05370.t01 Wine grape nucleus 85.52 85.52
AT3G53650.1 Thale cress nucleus 81.38 85.51
TraesCS3A01G357400.1 Wheat nucleus 81.38 85.51
AT3G45980.1 Thale cress nucleus 88.28 85.33
AT5G59910.1 Thale cress nucleus 88.28 85.33
HORVU6Hr1G015790.1 Barley nucleus 79.31 85.19
KRH29831 Soybean nucleus 86.9 85.14
KRH29832 Soybean nucleus 86.9 85.14
KRH29836 Soybean nucleus 86.9 85.14
AT2G37470.1 Thale cress nucleus 80.69 84.78
KRH29833 Soybean nucleus 83.45 84.62
KRH24831 Soybean nucleus 86.9 84.56
KRH24833 Soybean nucleus 86.9 84.56
TraesCS6A01G086200.1 Wheat nucleus 78.62 84.44
TraesCS6A01G086400.1 Wheat nucleus 78.62 84.44
TraesCS6B01G116000.1 Wheat nucleus 78.62 84.44
TraesCSU01G077200.1 Wheat nucleus 78.62 84.44
AT5G02570.1 Thale cress nucleus 76.55 84.09
KRH24830 Soybean nucleus 86.21 83.89
TraesCS3D01G099000.1 Wheat nucleus 78.62 83.82
TraesCS7A01G491100.1 Wheat extracellular, nucleus, unclear 82.07 83.8
TraesCS7B01G394900.1 Wheat nucleus 82.07 83.8
TraesCS7D01G477300.1 Wheat nucleus 82.07 83.8
TraesCS3B01G114600.1 Wheat nucleus 77.93 83.7
TraesCSU01G077400.1 Wheat nucleus 77.93 83.7
AT2G28720.1 Thale cress nucleus 86.9 83.44
EES03855 Sorghum nucleus 78.62 83.21
Zm00001d012423_P001 Maize plastid 78.62 83.21
TraesCS7D01G477400.1 Wheat nucleus 81.38 83.1
TraesCS3D01G075900.1 Wheat nucleus 77.93 83.09
TraesCS6D01G046200.1 Wheat nucleus, unclear 77.93 83.09
TraesCS6D01G046600.1 Wheat nucleus 77.93 83.09
Os01t0839500-00 Rice nucleus 79.31 82.73
TraesCS7B01G405800.1 Wheat nucleus 79.31 82.73
AT3G09480.1 Thale cress nucleus 71.72 82.54
Zm00001d042930_P001 Maize plastid 77.93 82.48
TraesCS6A01G040500.1 Wheat nucleus 77.24 82.35
TraesCS3B01G114400.1 Wheat nucleus 76.55 82.22
TraesCS7A01G491000.1 Wheat nucleus 77.93 81.88
TraesCS7B01G394700.1 Wheat nucleus 77.93 81.88
GSMUA_Achr2P19080_001 Banana nucleus 80.69 81.82
TraesCS1B01G294500.1 Wheat nucleus 83.45 81.76
HORVU7Hr1G110290.1 Barley nucleus 57.24 81.37
HORVU0Hr1G006420.1 Barley nucleus 77.24 81.16
HORVU3Hr1G034060.1 Barley nucleus 77.24 81.16
TraesCS3D01G342400.1 Wheat nucleus 77.24 81.16
TraesCS7B01G394600.1 Wheat nucleus 77.24 81.16
TraesCS4D01G205300.1 Wheat nucleus 79.31 80.99
EES00304 Sorghum nucleus 82.76 80.54
TraesCS7A01G490900.1 Wheat nucleus 76.55 80.43
TraesCS7B01G394100.1 Wheat nucleus 76.55 80.43
TraesCS7B01G394400.1 Wheat nucleus 76.55 80.43
TraesCSU01G169300.1 Wheat nucleus 82.07 80.41
TraesCSU01G169400.1 Wheat nucleus 82.07 80.41
TraesCSU01G169500.1 Wheat nucleus 82.07 80.41
TraesCSU01G169700.1 Wheat nucleus 82.07 80.41
TraesCSU01G169800.1 Wheat nucleus 82.07 80.41
TraesCSU01G169900.1 Wheat nucleus 82.07 80.41
TraesCSU01G170400.1 Wheat nucleus 82.07 80.41
TraesCSU01G170500.1 Wheat nucleus 82.07 80.41
TraesCSU01G170600.1 Wheat nucleus 82.07 80.41
TraesCSU01G170700.1 Wheat nucleus 82.07 80.41
TraesCSU01G170900.1 Wheat nucleus 82.07 80.41
TraesCSU01G171000.1 Wheat nucleus 82.07 80.41
TraesCSU01G171100.1 Wheat nucleus 82.07 80.41
TraesCS1A01G190400.1 Wheat nucleus 77.24 80.0
EES00305 Sorghum nucleus 82.07 79.87
Zm00001d039821_P001 Maize plastid 82.07 79.87
TraesCS7D01G485700.1 Wheat nucleus 76.55 79.86
OQU92807 Sorghum nucleus 81.38 79.73
TraesCS6A01G040200.1 Wheat nucleus 75.86 79.71
TraesCS3D01G351500.1 Wheat nucleus 67.59 79.67
TraesCS5A01G384300.1 Wheat nucleus 83.45 79.61
EES00399 Sorghum nucleus 82.07 79.33
Zm00001d044247_P001 Maize plastid 80.69 79.05
TraesCS2D01G310800.1 Wheat nucleus 82.76 78.95
TraesCS5B01G389100.1 Wheat nucleus 82.76 78.95
EES18353 Sorghum nucleus 80.0 78.91
TraesCS4A01G030500.1 Wheat nucleus 76.55 78.72
TraesCS6D01G046400.1 Wheat nucleus 75.86 78.57
TraesCS4A01G099900.1 Wheat nucleus 80.69 78.52
TraesCS4B01G204400.1 Wheat nucleus 80.69 78.52
TraesCS6A01G040400.1 Wheat nucleus 75.17 78.42
TraesCS3D01G088900.1 Wheat nucleus 82.07 78.29
TraesCS4A01G260400.1 Wheat nucleus 82.07 78.29
TraesCS4D01G054200.1 Wheat nucleus 82.07 78.29
Zm00001d007084_P001 Maize plastid 82.07 78.29
HORVU6Hr1G087190.1 Barley nucleus 80.69 78.0
Zm00001d011236_P001 Maize plastid 80.69 78.0
EER96770 Sorghum nucleus 82.07 77.78
PGSC0003DMT400074020 Potato nucleus 72.41 77.78
TraesCS1B01G357600.1 Wheat nucleus 77.24 77.78
TraesCS3A01G102500.1 Wheat nucleus 77.24 77.78
TraesCS6A01G034500.1 Wheat nucleus 77.24 77.78
TraesCS6A01G035000.1 Wheat nucleus 77.24 77.78
EES15460 Sorghum nucleus 81.38 77.63
Os03t0279000-00 Rice nucleus 81.38 77.63
TraesCS1A01G228700.1 Wheat nucleus 81.38 77.63
Zm00001d005789_P001 Maize plastid 81.38 77.63
TraesCS3A01G088800.1 Wheat nucleus 80.69 77.48
Zm00001d020580_P001 Maize plastid 80.69 77.48
TraesCS1D01G396600.1 Wheat golgi, nucleus, unclear 80.0 77.33
Zm00001d032070_P001 Maize plastid 80.0 77.33
TraesCS6B01G048500.1 Wheat unclear 77.24 77.24
HORVU1Hr1G049920.1 Barley nucleus 81.38 77.12
TraesCS1B01G192500.1 Wheat nucleus 81.38 77.12
TraesCS6B01G048800.1 Wheat nucleus 76.55 77.08
TraesCS6B01G049100.1 Wheat nucleus 76.55 77.08
TraesCS6B01G049300.1 Wheat nucleus 76.55 77.08
TraesCS6B01G082600.1 Wheat nucleus 76.55 77.08
TraesCS5D01G020000.1 Wheat nucleus 83.45 77.07
TraesCS1B01G244900.1 Wheat nucleus 80.69 76.97
TraesCS1B01G245300.1 Wheat nucleus 80.69 76.97
TraesCS4B01G054200.1 Wheat nucleus 80.69 76.97
Zm00001d025913_P001 Maize plastid 79.31 76.67
Zm00001d050100_P001 Maize plastid 79.31 76.67
TraesCS4B01G275400.1 Wheat nucleus 81.38 76.62
TraesCS6D01G040200.1 Wheat nucleus 76.55 76.55
TraesCS6D01G040600.1 Wheat nucleus 76.55 76.55
OQU87075 Sorghum nucleus 80.69 76.47
Os01t0149600-01 Rice nucleus 80.69 76.47
Os01t0152300-00 Rice nucleus 80.69 76.47
Os01t0152900-00 Rice nucleus 80.69 76.47
Os01t0153100-00 Rice nucleus 80.69 76.47
Os05t0574300-00 Rice nucleus 80.0 76.32
TraesCS1D01G233300.1 Wheat nucleus 80.0 76.32
EER97675 Sorghum nucleus 79.31 76.16
EES15092 Sorghum nucleus 79.31 76.16
TraesCS3B01G390300.1 Wheat nucleus 70.34 76.12
TraesCS4A01G030400.1 Wheat nucleus 80.69 75.97
Zm00001d051591_P001 Maize plastid 80.69 75.97
TraesCS1B01G416600.1 Wheat nucleus 78.62 75.5
EES07386 Sorghum nucleus 80.69 75.48
TraesCS1A01G388600.1 Wheat nucleus 79.31 75.16
GSMUA_Achr7P15260_001 Banana nucleus 78.62 75.0
TraesCS1A01G361600.1 Wheat nucleus 78.62 74.51
TraesCS1A01G367900.1 Wheat nucleus 78.62 74.51
TraesCS1A01G368000.1 Wheat nucleus 78.62 74.51
TraesCS1B01G386200.1 Wheat nucleus 78.62 74.51
TraesCS1B01G386400.1 Wheat nucleus 78.62 74.51
TraesCS1B01G386700.1 Wheat nucleus 78.62 74.51
TraesCS1D01G194600.1 Wheat nucleus 78.62 74.51
TraesCS1D01G366300.1 Wheat nucleus 78.62 74.51
TraesCS1D01G373800.1 Wheat nucleus 78.62 74.51
TraesCS1D01G373900.1 Wheat nucleus 78.62 74.51
Os01t0153300-00 Rice nucleus 79.31 74.19
TraesCS1B01G378300.1 Wheat nucleus 77.93 73.86
TraesCS1B01G386500.1 Wheat nucleus 77.93 73.86
TraesCS1B01G386600.1 Wheat nucleus 77.93 73.86
HORVU7Hr1G110130.1 Barley nucleus 60.0 73.73
TraesCS5A01G051900.1 Wheat nucleus 79.31 73.72
TraesCS6B01G376900.1 Wheat nucleus 77.24 73.68
TraesCS5B01G058200.1 Wheat nucleus 80.69 73.58
TraesCS5B01G064900.1 Wheat nucleus, unclear 80.69 73.58
HORVU6Hr1G005950.2 Barley nucleus 78.62 73.55
TraesCS6B01G084900.1 Wheat nucleus 77.93 73.38
TraesCS6D01G326800.1 Wheat nucleus, unclear 77.24 72.73
TraesCS1D01G232900.1 Wheat nucleus 78.62 72.61
TraesCSU01G081100.1 Wheat nucleus 76.55 72.08
HORVU1Hr1G091370.1 Barley nucleus 78.62 71.7
HORVU7Hr1G110330.2 Barley nucleus 58.62 71.43
HORVU6Hr1G008320.1 Barley nucleus 77.24 71.34
HORVU6Hr1G015760.1 Barley nucleus, plastid 79.31 70.55
HORVU7Hr1G110190.1 Barley nucleus 64.14 70.45
HORVU4Hr1G070240.1 Barley nucleus 79.31 69.28
HORVU3Hr1G013530.1 Barley nucleus 77.93 68.9
TraesCS5D01G393900.1 Wheat nucleus 77.93 68.9
HORVU1Hr1G072190.4 Barley nucleus 83.45 68.75
HORVU7Hr1G110170.1 Barley nucleus 77.24 68.71
HORVU4Hr1G009040.2 Barley nucleus 80.69 68.02
HORVU3Hr1G013680.1 Barley nucleus 78.62 67.06
Solyc10g044580.1.1 Tomato nucleus 62.07 66.67
HORVU6Hr1G006110.1 Barley nucleus, plastid 53.1 65.81
HORVU2Hr1G077630.1 Barley nucleus 82.07 65.75
HORVU7Hr1G110090.1 Barley nucleus, plastid 77.24 64.74
HORVU1Hr1G058500.1 Barley nucleus 81.38 64.48
HORVU4Hr1G073130.1 Barley nucleus, plastid 81.38 64.48
HORVU1Hr1G078480.6 Barley nucleus 78.62 63.33
HORVU1Hr1G078530.3 Barley nucleus 78.62 63.33
HORVU1Hr1G085540.1 Barley nucleus 77.93 63.13
HORVU6Hr1G083110.1 Barley nucleus 73.1 61.99
HORVU5Hr1G094500.1 Barley nucleus, plastid 82.07 56.13
HORVU3Hr1G015810.1 Barley nucleus, plastid 80.69 55.98
Os08t0490900-00 Rice nucleus 81.38 55.66
HORVU1Hr1G056530.1 Barley nucleus, plastid 80.69 55.45
HORVU3Hr1G086580.1 Barley nucleus, plastid 67.59 53.26
HORVU3Hr1G086610.2 Barley nucleus 75.17 51.9
Zm00001d048491_P001 Maize plastid 81.38 49.58
GSMUA_Achr6P33320_001 Banana nucleus 70.34 49.28
HORVU1Hr1G066130.1 Barley nucleus 82.07 48.97
TraesCS6B01G081700.1 Wheat nucleus 53.1 46.95
TraesCS6D01G063200.1 Wheat nucleus 56.55 41.41
TraesCS6A01G061400.1 Wheat nucleus 55.86 38.76
AT1G08170.1 Thale cress nucleus 44.14 26.34
PGSC0003DMT400074018 Potato nucleus 60.69 23.1
Protein Annotations
Gene3D:1.10.20.10MapMan:12.1.3EntrezGene:832352ProteinID:AED93093.1ArrayExpress:AT5G22880EnsemblPlantsGene:AT5G22880
RefSeq:AT5G22880TAIR:AT5G22880RefSeq:AT5G22880-TAIR-GEnsemblPlants:AT5G22880.1TAIR:AT5G22880.1ProteinID:BAB10609.1
EMBL:BT025507GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005694
GO:GO:0005730GO:GO:0046982Symbol:H2BInterPro:Histone-foldInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2B
InterPro:IPR009072RefSeq:NP_197679.1PFAM:PF00125PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00621ScanProsite:PS00357PANTHER:PTHR23428
PANTHER:PTHR23428:SF172UniProt:Q1H5F7UniProt:Q9FFC0SMART:SM00427SUPFAM:SSF47113UniParc:UPI00000A6679
EMBL:Y07745SEG:seg::::
Description
H2BHistone H2B [Source:UniProtKB/TrEMBL;Acc:Q1H5F7]
Coordinates
chr5:-:7651868..7652714
Molecular Weight (calculated)
15733.3 Da
IEP (calculated)
10.796
GRAVY (calculated)
-0.678
Length
145 amino acids
Sequence
(BLAST)
001: MAKADKKPAE KKPAEKTPAA EPAAAAEKKP KAGKKLPKEP AGAGDKKKKR SKKNVETYKI YIFKVLKQVH PDIGISSKAM GIMNSFINDI FEKLAGESSK
101: LARYNKKPTI TSREIQTAVR LVLPGELAKH AVSEGTKAVT KFTSS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.