Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra002436.1-P | Field mustard | nucleus | 93.1 | 95.74 |
CDY26964 | Canola | nucleus | 93.1 | 95.74 |
CDX71019 | Canola | nucleus | 92.41 | 94.37 |
TraesCS6D01G046500.1 | Wheat | nucleus | 42.76 | 93.94 |
Bra006639.1-P | Field mustard | nucleus | 93.1 | 93.75 |
CDX88779 | Canola | nucleus | 93.1 | 93.75 |
GSMUA_Achr8P20900_001 | Banana | nucleus | 42.07 | 92.42 |
CDX92329 | Canola | nucleus | 91.03 | 91.67 |
GSMUA_Achr10P... | Banana | nucleus | 41.38 | 90.91 |
TraesCS6B01G055300.1 | Wheat | nucleus | 59.31 | 89.58 |
TraesCS6B01G055500.1 | Wheat | nucleus | 59.31 | 89.58 |
PGSC0003DMT400070383 | Potato | nucleus | 87.59 | 89.44 |
AT1G07790.1 | Thale cress | nucleus | 91.03 | 89.19 |
GSMUA_Achr9P04060_001 | Banana | nucleus | 71.72 | 88.89 |
TraesCS7B01G394800.1 | Wheat | nucleus | 59.31 | 88.66 |
TraesCS3A01G075800.1 | Wheat | nucleus | 58.62 | 88.54 |
PGSC0003DMT400022099 | Potato | nucleus | 87.59 | 88.19 |
Solyc02g038690.1.1 | Tomato | nucleus | 81.38 | 88.06 |
Solyc12g013510.1.1 | Tomato | nucleus | 84.14 | 87.77 |
Solyc11g007930.1.1 | Tomato | nucleus | 83.45 | 87.68 |
PGSC0003DMT400022074 | Potato | nucleus | 86.9 | 87.5 |
AT3G46030.1 | Thale cress | nucleus | 86.9 | 86.9 |
TraesCS3A01G357500.1 | Wheat | nucleus | 81.38 | 86.76 |
TraesCS3D01G351300.1 | Wheat | nucleus | 81.38 | 86.76 |
TraesCS3D01G351400.1 | Wheat | nucleus | 81.38 | 86.76 |
TraesCS7B01G394500.1 | Wheat | nucleus | 57.24 | 86.46 |
TraesCS2A01G312400.1 | Wheat | nucleus | 70.34 | 86.44 |
TraesCS3B01G390000.1 | Wheat | nucleus | 80.69 | 86.03 |
TraesCS3B01G390100.1 | Wheat | nucleus | 80.0 | 85.93 |
Os05t0460475-00 | Rice | nucleus | 62.76 | 85.85 |
VIT_13s0019g05370.t01 | Wine grape | nucleus | 85.52 | 85.52 |
AT3G53650.1 | Thale cress | nucleus | 81.38 | 85.51 |
TraesCS3A01G357400.1 | Wheat | nucleus | 81.38 | 85.51 |
AT3G45980.1 | Thale cress | nucleus | 88.28 | 85.33 |
AT5G59910.1 | Thale cress | nucleus | 88.28 | 85.33 |
HORVU6Hr1G015790.1 | Barley | nucleus | 79.31 | 85.19 |
KRH29831 | Soybean | nucleus | 86.9 | 85.14 |
KRH29832 | Soybean | nucleus | 86.9 | 85.14 |
KRH29836 | Soybean | nucleus | 86.9 | 85.14 |
AT2G37470.1 | Thale cress | nucleus | 80.69 | 84.78 |
KRH29833 | Soybean | nucleus | 83.45 | 84.62 |
KRH24831 | Soybean | nucleus | 86.9 | 84.56 |
KRH24833 | Soybean | nucleus | 86.9 | 84.56 |
TraesCS6A01G086200.1 | Wheat | nucleus | 78.62 | 84.44 |
TraesCS6A01G086400.1 | Wheat | nucleus | 78.62 | 84.44 |
TraesCS6B01G116000.1 | Wheat | nucleus | 78.62 | 84.44 |
TraesCSU01G077200.1 | Wheat | nucleus | 78.62 | 84.44 |
AT5G02570.1 | Thale cress | nucleus | 76.55 | 84.09 |
KRH24830 | Soybean | nucleus | 86.21 | 83.89 |
TraesCS3D01G099000.1 | Wheat | nucleus | 78.62 | 83.82 |
TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 82.07 | 83.8 |
TraesCS7B01G394900.1 | Wheat | nucleus | 82.07 | 83.8 |
TraesCS7D01G477300.1 | Wheat | nucleus | 82.07 | 83.8 |
TraesCS3B01G114600.1 | Wheat | nucleus | 77.93 | 83.7 |
TraesCSU01G077400.1 | Wheat | nucleus | 77.93 | 83.7 |
AT2G28720.1 | Thale cress | nucleus | 86.9 | 83.44 |
EES03855 | Sorghum | nucleus | 78.62 | 83.21 |
Zm00001d012423_P001 | Maize | plastid | 78.62 | 83.21 |
TraesCS7D01G477400.1 | Wheat | nucleus | 81.38 | 83.1 |
TraesCS3D01G075900.1 | Wheat | nucleus | 77.93 | 83.09 |
TraesCS6D01G046200.1 | Wheat | nucleus, unclear | 77.93 | 83.09 |
TraesCS6D01G046600.1 | Wheat | nucleus | 77.93 | 83.09 |
Os01t0839500-00 | Rice | nucleus | 79.31 | 82.73 |
TraesCS7B01G405800.1 | Wheat | nucleus | 79.31 | 82.73 |
AT3G09480.1 | Thale cress | nucleus | 71.72 | 82.54 |
Zm00001d042930_P001 | Maize | plastid | 77.93 | 82.48 |
TraesCS6A01G040500.1 | Wheat | nucleus | 77.24 | 82.35 |
TraesCS3B01G114400.1 | Wheat | nucleus | 76.55 | 82.22 |
TraesCS7A01G491000.1 | Wheat | nucleus | 77.93 | 81.88 |
TraesCS7B01G394700.1 | Wheat | nucleus | 77.93 | 81.88 |
GSMUA_Achr2P19080_001 | Banana | nucleus | 80.69 | 81.82 |
TraesCS1B01G294500.1 | Wheat | nucleus | 83.45 | 81.76 |
HORVU7Hr1G110290.1 | Barley | nucleus | 57.24 | 81.37 |
HORVU0Hr1G006420.1 | Barley | nucleus | 77.24 | 81.16 |
HORVU3Hr1G034060.1 | Barley | nucleus | 77.24 | 81.16 |
TraesCS3D01G342400.1 | Wheat | nucleus | 77.24 | 81.16 |
TraesCS7B01G394600.1 | Wheat | nucleus | 77.24 | 81.16 |
TraesCS4D01G205300.1 | Wheat | nucleus | 79.31 | 80.99 |
EES00304 | Sorghum | nucleus | 82.76 | 80.54 |
TraesCS7A01G490900.1 | Wheat | nucleus | 76.55 | 80.43 |
TraesCS7B01G394100.1 | Wheat | nucleus | 76.55 | 80.43 |
TraesCS7B01G394400.1 | Wheat | nucleus | 76.55 | 80.43 |
TraesCSU01G169300.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G169400.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G169500.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G169700.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G169800.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G169900.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G170400.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G170500.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G170600.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G170700.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G170900.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G171000.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCSU01G171100.1 | Wheat | nucleus | 82.07 | 80.41 |
TraesCS1A01G190400.1 | Wheat | nucleus | 77.24 | 80.0 |
EES00305 | Sorghum | nucleus | 82.07 | 79.87 |
Zm00001d039821_P001 | Maize | plastid | 82.07 | 79.87 |
TraesCS7D01G485700.1 | Wheat | nucleus | 76.55 | 79.86 |
OQU92807 | Sorghum | nucleus | 81.38 | 79.73 |
TraesCS6A01G040200.1 | Wheat | nucleus | 75.86 | 79.71 |
TraesCS3D01G351500.1 | Wheat | nucleus | 67.59 | 79.67 |
TraesCS5A01G384300.1 | Wheat | nucleus | 83.45 | 79.61 |
EES00399 | Sorghum | nucleus | 82.07 | 79.33 |
Zm00001d044247_P001 | Maize | plastid | 80.69 | 79.05 |
TraesCS2D01G310800.1 | Wheat | nucleus | 82.76 | 78.95 |
TraesCS5B01G389100.1 | Wheat | nucleus | 82.76 | 78.95 |
EES18353 | Sorghum | nucleus | 80.0 | 78.91 |
TraesCS4A01G030500.1 | Wheat | nucleus | 76.55 | 78.72 |
TraesCS6D01G046400.1 | Wheat | nucleus | 75.86 | 78.57 |
TraesCS4A01G099900.1 | Wheat | nucleus | 80.69 | 78.52 |
TraesCS4B01G204400.1 | Wheat | nucleus | 80.69 | 78.52 |
TraesCS6A01G040400.1 | Wheat | nucleus | 75.17 | 78.42 |
TraesCS3D01G088900.1 | Wheat | nucleus | 82.07 | 78.29 |
TraesCS4A01G260400.1 | Wheat | nucleus | 82.07 | 78.29 |
TraesCS4D01G054200.1 | Wheat | nucleus | 82.07 | 78.29 |
Zm00001d007084_P001 | Maize | plastid | 82.07 | 78.29 |
HORVU6Hr1G087190.1 | Barley | nucleus | 80.69 | 78.0 |
Zm00001d011236_P001 | Maize | plastid | 80.69 | 78.0 |
EER96770 | Sorghum | nucleus | 82.07 | 77.78 |
PGSC0003DMT400074020 | Potato | nucleus | 72.41 | 77.78 |
TraesCS1B01G357600.1 | Wheat | nucleus | 77.24 | 77.78 |
TraesCS3A01G102500.1 | Wheat | nucleus | 77.24 | 77.78 |
TraesCS6A01G034500.1 | Wheat | nucleus | 77.24 | 77.78 |
TraesCS6A01G035000.1 | Wheat | nucleus | 77.24 | 77.78 |
EES15460 | Sorghum | nucleus | 81.38 | 77.63 |
Os03t0279000-00 | Rice | nucleus | 81.38 | 77.63 |
TraesCS1A01G228700.1 | Wheat | nucleus | 81.38 | 77.63 |
Zm00001d005789_P001 | Maize | plastid | 81.38 | 77.63 |
TraesCS3A01G088800.1 | Wheat | nucleus | 80.69 | 77.48 |
Zm00001d020580_P001 | Maize | plastid | 80.69 | 77.48 |
TraesCS1D01G396600.1 | Wheat | golgi, nucleus, unclear | 80.0 | 77.33 |
Zm00001d032070_P001 | Maize | plastid | 80.0 | 77.33 |
TraesCS6B01G048500.1 | Wheat | unclear | 77.24 | 77.24 |
HORVU1Hr1G049920.1 | Barley | nucleus | 81.38 | 77.12 |
TraesCS1B01G192500.1 | Wheat | nucleus | 81.38 | 77.12 |
TraesCS6B01G048800.1 | Wheat | nucleus | 76.55 | 77.08 |
TraesCS6B01G049100.1 | Wheat | nucleus | 76.55 | 77.08 |
TraesCS6B01G049300.1 | Wheat | nucleus | 76.55 | 77.08 |
TraesCS6B01G082600.1 | Wheat | nucleus | 76.55 | 77.08 |
TraesCS5D01G020000.1 | Wheat | nucleus | 83.45 | 77.07 |
TraesCS1B01G244900.1 | Wheat | nucleus | 80.69 | 76.97 |
TraesCS1B01G245300.1 | Wheat | nucleus | 80.69 | 76.97 |
TraesCS4B01G054200.1 | Wheat | nucleus | 80.69 | 76.97 |
Zm00001d025913_P001 | Maize | plastid | 79.31 | 76.67 |
Zm00001d050100_P001 | Maize | plastid | 79.31 | 76.67 |
TraesCS4B01G275400.1 | Wheat | nucleus | 81.38 | 76.62 |
TraesCS6D01G040200.1 | Wheat | nucleus | 76.55 | 76.55 |
TraesCS6D01G040600.1 | Wheat | nucleus | 76.55 | 76.55 |
OQU87075 | Sorghum | nucleus | 80.69 | 76.47 |
Os01t0149600-01 | Rice | nucleus | 80.69 | 76.47 |
Os01t0152300-00 | Rice | nucleus | 80.69 | 76.47 |
Os01t0152900-00 | Rice | nucleus | 80.69 | 76.47 |
Os01t0153100-00 | Rice | nucleus | 80.69 | 76.47 |
Os05t0574300-00 | Rice | nucleus | 80.0 | 76.32 |
TraesCS1D01G233300.1 | Wheat | nucleus | 80.0 | 76.32 |
EER97675 | Sorghum | nucleus | 79.31 | 76.16 |
EES15092 | Sorghum | nucleus | 79.31 | 76.16 |
TraesCS3B01G390300.1 | Wheat | nucleus | 70.34 | 76.12 |
TraesCS4A01G030400.1 | Wheat | nucleus | 80.69 | 75.97 |
Zm00001d051591_P001 | Maize | plastid | 80.69 | 75.97 |
TraesCS1B01G416600.1 | Wheat | nucleus | 78.62 | 75.5 |
EES07386 | Sorghum | nucleus | 80.69 | 75.48 |
TraesCS1A01G388600.1 | Wheat | nucleus | 79.31 | 75.16 |
GSMUA_Achr7P15260_001 | Banana | nucleus | 78.62 | 75.0 |
TraesCS1A01G361600.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1A01G367900.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1A01G368000.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1B01G386200.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1B01G386400.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1B01G386700.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1D01G194600.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1D01G366300.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1D01G373800.1 | Wheat | nucleus | 78.62 | 74.51 |
TraesCS1D01G373900.1 | Wheat | nucleus | 78.62 | 74.51 |
Os01t0153300-00 | Rice | nucleus | 79.31 | 74.19 |
TraesCS1B01G378300.1 | Wheat | nucleus | 77.93 | 73.86 |
TraesCS1B01G386500.1 | Wheat | nucleus | 77.93 | 73.86 |
TraesCS1B01G386600.1 | Wheat | nucleus | 77.93 | 73.86 |
HORVU7Hr1G110130.1 | Barley | nucleus | 60.0 | 73.73 |
TraesCS5A01G051900.1 | Wheat | nucleus | 79.31 | 73.72 |
TraesCS6B01G376900.1 | Wheat | nucleus | 77.24 | 73.68 |
TraesCS5B01G058200.1 | Wheat | nucleus | 80.69 | 73.58 |
TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 80.69 | 73.58 |
HORVU6Hr1G005950.2 | Barley | nucleus | 78.62 | 73.55 |
TraesCS6B01G084900.1 | Wheat | nucleus | 77.93 | 73.38 |
TraesCS6D01G326800.1 | Wheat | nucleus, unclear | 77.24 | 72.73 |
TraesCS1D01G232900.1 | Wheat | nucleus | 78.62 | 72.61 |
TraesCSU01G081100.1 | Wheat | nucleus | 76.55 | 72.08 |
HORVU1Hr1G091370.1 | Barley | nucleus | 78.62 | 71.7 |
HORVU7Hr1G110330.2 | Barley | nucleus | 58.62 | 71.43 |
HORVU6Hr1G008320.1 | Barley | nucleus | 77.24 | 71.34 |
HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 79.31 | 70.55 |
HORVU7Hr1G110190.1 | Barley | nucleus | 64.14 | 70.45 |
HORVU4Hr1G070240.1 | Barley | nucleus | 79.31 | 69.28 |
HORVU3Hr1G013530.1 | Barley | nucleus | 77.93 | 68.9 |
TraesCS5D01G393900.1 | Wheat | nucleus | 77.93 | 68.9 |
HORVU1Hr1G072190.4 | Barley | nucleus | 83.45 | 68.75 |
HORVU7Hr1G110170.1 | Barley | nucleus | 77.24 | 68.71 |
HORVU4Hr1G009040.2 | Barley | nucleus | 80.69 | 68.02 |
HORVU3Hr1G013680.1 | Barley | nucleus | 78.62 | 67.06 |
Solyc10g044580.1.1 | Tomato | nucleus | 62.07 | 66.67 |
HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 53.1 | 65.81 |
HORVU2Hr1G077630.1 | Barley | nucleus | 82.07 | 65.75 |
HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 77.24 | 64.74 |
HORVU1Hr1G058500.1 | Barley | nucleus | 81.38 | 64.48 |
HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 81.38 | 64.48 |
HORVU1Hr1G078480.6 | Barley | nucleus | 78.62 | 63.33 |
HORVU1Hr1G078530.3 | Barley | nucleus | 78.62 | 63.33 |
HORVU1Hr1G085540.1 | Barley | nucleus | 77.93 | 63.13 |
HORVU6Hr1G083110.1 | Barley | nucleus | 73.1 | 61.99 |
HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 82.07 | 56.13 |
HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 80.69 | 55.98 |
Os08t0490900-00 | Rice | nucleus | 81.38 | 55.66 |
HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 80.69 | 55.45 |
HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 67.59 | 53.26 |
HORVU3Hr1G086610.2 | Barley | nucleus | 75.17 | 51.9 |
Zm00001d048491_P001 | Maize | plastid | 81.38 | 49.58 |
GSMUA_Achr6P33320_001 | Banana | nucleus | 70.34 | 49.28 |
HORVU1Hr1G066130.1 | Barley | nucleus | 82.07 | 48.97 |
TraesCS6B01G081700.1 | Wheat | nucleus | 53.1 | 46.95 |
TraesCS6D01G063200.1 | Wheat | nucleus | 56.55 | 41.41 |
TraesCS6A01G061400.1 | Wheat | nucleus | 55.86 | 38.76 |
AT1G08170.1 | Thale cress | nucleus | 44.14 | 26.34 |
PGSC0003DMT400074018 | Potato | nucleus | 60.69 | 23.1 |
Protein Annotations
Gene3D:1.10.20.10 | MapMan:12.1.3 | EntrezGene:832352 | ProteinID:AED93093.1 | ArrayExpress:AT5G22880 | EnsemblPlantsGene:AT5G22880 |
RefSeq:AT5G22880 | TAIR:AT5G22880 | RefSeq:AT5G22880-TAIR-G | EnsemblPlants:AT5G22880.1 | TAIR:AT5G22880.1 | ProteinID:BAB10609.1 |
EMBL:BT025507 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 |
GO:GO:0005730 | GO:GO:0046982 | Symbol:H2B | InterPro:Histone-fold | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B |
InterPro:IPR009072 | RefSeq:NP_197679.1 | PFAM:PF00125 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00621 | ScanProsite:PS00357 | PANTHER:PTHR23428 |
PANTHER:PTHR23428:SF172 | UniProt:Q1H5F7 | UniProt:Q9FFC0 | SMART:SM00427 | SUPFAM:SSF47113 | UniParc:UPI00000A6679 |
EMBL:Y07745 | SEG:seg | : | : | : | : |
Description
H2BHistone H2B [Source:UniProtKB/TrEMBL;Acc:Q1H5F7]
Coordinates
chr5:-:7651868..7652714
Molecular Weight (calculated)
15733.3 Da
IEP (calculated)
10.796
GRAVY (calculated)
-0.678
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKADKKPAE KKPAEKTPAA EPAAAAEKKP KAGKKLPKEP AGAGDKKKKR SKKNVETYKI YIFKVLKQVH PDIGISSKAM GIMNSFINDI FEKLAGESSK
101: LARYNKKPTI TSREIQTAVR LVLPGELAKH AVSEGTKAVT KFTSS
101: LARYNKKPTI TSREIQTAVR LVLPGELAKH AVSEGTKAVT KFTSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.