Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P20900_001 | Banana | nucleus | 40.0 | 81.82 |
| TraesCS6D01G046500.1 | Wheat | nucleus | 40.0 | 81.82 |
| GSMUA_Achr10P... | Banana | nucleus | 39.26 | 80.3 |
| Bra006685.1-P | Field mustard | nucleus | 80.74 | 77.31 |
| CDX71064 | Canola | nucleus | 80.74 | 77.31 |
| CDX88732 | Canola | nucleus | 80.74 | 77.31 |
| PGSC0003DMT400043578 | Potato | nucleus | 80.0 | 76.6 |
| Os05t0460475-00 | Rice | nucleus | 59.26 | 75.47 |
| PGSC0003DMT400070383 | Potato | nucleus | 79.26 | 75.35 |
| TraesCS7B01G394800.1 | Wheat | nucleus | 54.07 | 75.26 |
| PGSC0003DMT400022074 | Potato | nucleus | 80.0 | 75.0 |
| PGSC0003DMT400022099 | Potato | nucleus | 80.0 | 75.0 |
| PGSC0003DMT400070382 | Potato | nucleus | 80.0 | 75.0 |
| TraesCS6B01G055300.1 | Wheat | nucleus | 53.33 | 75.0 |
| TraesCS6B01G055500.1 | Wheat | nucleus | 53.33 | 75.0 |
| TraesCS3A01G075800.1 | Wheat | nucleus | 52.59 | 73.96 |
| CDX71019 | Canola | nucleus | 77.78 | 73.94 |
| Bra002436.1-P | Field mustard | nucleus | 77.04 | 73.76 |
| CDY26964 | Canola | nucleus | 77.04 | 73.76 |
| GSMUA_Achr9P04060_001 | Banana | nucleus | 63.7 | 73.5 |
| Bra006639.1-P | Field mustard | nucleus | 77.78 | 72.92 |
| CDX88779 | Canola | nucleus | 77.78 | 72.92 |
| PGSC0003DMT400060096 | Potato | nucleus | 79.26 | 72.79 |
| PGSC0003DMT400018456 | Potato | nucleus | 76.3 | 72.54 |
| AT5G22880.1 | Thale cress | nucleus | 77.78 | 72.41 |
| PGSC0003DMT400077939 | Potato | nucleus | 77.78 | 71.92 |
| VIT_13s0019g05370.t01 | Wine grape | nucleus | 77.04 | 71.72 |
| PGSC0003DMT400018455 | Potato | nucleus | 75.56 | 71.33 |
| TraesCS3A01G357500.1 | Wheat | nucleus | 71.85 | 71.32 |
| TraesCS3D01G351300.1 | Wheat | nucleus | 71.85 | 71.32 |
| TraesCS3D01G351400.1 | Wheat | nucleus | 71.85 | 71.32 |
| TraesCS2A01G312400.1 | Wheat | nucleus | 62.22 | 71.19 |
| TraesCS3B01G390100.1 | Wheat | nucleus | 71.11 | 71.11 |
| TraesCS3A01G357400.1 | Wheat | nucleus | 72.59 | 71.01 |
| TraesCS7B01G394500.1 | Wheat | nucleus | 50.37 | 70.83 |
| KRH29833 | Soybean | nucleus | 74.81 | 70.63 |
| TraesCS3B01G390000.1 | Wheat | nucleus | 71.11 | 70.59 |
| HORVU6Hr1G015790.1 | Barley | nucleus | 70.37 | 70.37 |
| KRH29831 | Soybean | nucleus | 77.04 | 70.27 |
| KRH29832 | Soybean | nucleus | 77.04 | 70.27 |
| KRH29836 | Soybean | nucleus | 77.04 | 70.27 |
| CDX92329 | Canola | nucleus | 74.81 | 70.14 |
| PGSC0003DMT400074994 | Potato | nucleus | 76.3 | 70.07 |
| GSMUA_Achr2P19080_001 | Banana | nucleus | 74.07 | 69.93 |
| KRH24830 | Soybean | nucleus | 77.04 | 69.8 |
| KRH24831 | Soybean | nucleus | 77.04 | 69.8 |
| KRH24833 | Soybean | nucleus | 77.04 | 69.8 |
| TraesCS3B01G114600.1 | Wheat | nucleus | 69.63 | 69.63 |
| TraesCS6A01G086400.1 | Wheat | nucleus | 69.63 | 69.63 |
| TraesCS6B01G116000.1 | Wheat | nucleus | 69.63 | 69.63 |
| TraesCSU01G077200.1 | Wheat | nucleus | 69.63 | 69.63 |
| TraesCS3D01G099000.1 | Wheat | nucleus | 69.63 | 69.12 |
| PGSC0003DMT400001108 | Potato | nucleus | 72.59 | 69.01 |
| TraesCS3B01G114400.1 | Wheat | nucleus | 68.89 | 68.89 |
| TraesCS6A01G086200.1 | Wheat | nucleus | 68.89 | 68.89 |
| TraesCSU01G077400.1 | Wheat | nucleus | 68.89 | 68.89 |
| TraesCS3D01G075900.1 | Wheat | nucleus | 68.89 | 68.38 |
| TraesCS6A01G040500.1 | Wheat | nucleus | 68.89 | 68.38 |
| TraesCS6D01G046200.1 | Wheat | nucleus, unclear | 68.89 | 68.38 |
| TraesCS6D01G046600.1 | Wheat | nucleus | 68.89 | 68.38 |
| TraesCS7B01G405800.1 | Wheat | nucleus | 70.37 | 68.35 |
| TraesCS7A01G491000.1 | Wheat | nucleus | 69.63 | 68.12 |
| TraesCS7B01G394700.1 | Wheat | nucleus | 69.63 | 68.12 |
| TraesCS4D01G205300.1 | Wheat | nucleus | 71.11 | 67.61 |
| TraesCS7B01G394600.1 | Wheat | nucleus | 68.89 | 67.39 |
| EES03855 | Sorghum | nucleus | 68.15 | 67.15 |
| Zm00001d012423_P001 | Maize | plastid | 68.15 | 67.15 |
| Zm00001d042930_P001 | Maize | plastid | 68.15 | 67.15 |
| TraesCS1A01G190400.1 | Wheat | nucleus | 69.63 | 67.14 |
| EES00304 | Sorghum | nucleus | 74.07 | 67.11 |
| Os01t0839500-00 | Rice | nucleus | 68.89 | 66.91 |
| OQU92807 | Sorghum | nucleus | 73.33 | 66.89 |
| TraesCS1B01G294500.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G169300.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G169400.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G169500.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G169700.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G169800.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G169900.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G170400.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G170500.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G170600.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G170700.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G170900.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G171000.1 | Wheat | nucleus | 73.33 | 66.89 |
| TraesCSU01G171100.1 | Wheat | nucleus | 73.33 | 66.89 |
| EES00399 | Sorghum | nucleus | 74.07 | 66.67 |
| EES18353 | Sorghum | nucleus | 72.59 | 66.67 |
| HORVU0Hr1G006420.1 | Barley | nucleus | 68.15 | 66.67 |
| HORVU3Hr1G034060.1 | Barley | nucleus | 68.15 | 66.67 |
| TraesCS3D01G342400.1 | Wheat | nucleus | 68.15 | 66.67 |
| TraesCS7A01G490900.1 | Wheat | nucleus | 68.15 | 66.67 |
| TraesCS7B01G394100.1 | Wheat | nucleus | 68.15 | 66.67 |
| TraesCS7B01G394400.1 | Wheat | nucleus | 68.15 | 66.67 |
| TraesCS2D01G310800.1 | Wheat | nucleus | 74.81 | 66.45 |
| TraesCS5A01G384300.1 | Wheat | nucleus | 74.81 | 66.45 |
| TraesCS5B01G389100.1 | Wheat | nucleus | 74.81 | 66.45 |
| EES00305 | Sorghum | nucleus | 73.33 | 66.44 |
| TraesCS4A01G099900.1 | Wheat | nucleus | 73.33 | 66.44 |
| Zm00001d039821_P001 | Maize | plastid | 73.33 | 66.44 |
| TraesCS7A01G491100.1 | Wheat | extracellular, nucleus, unclear | 69.63 | 66.2 |
| TraesCS7B01G394900.1 | Wheat | nucleus | 69.63 | 66.2 |
| TraesCS7D01G477300.1 | Wheat | nucleus | 69.63 | 66.2 |
| TraesCS7D01G485700.1 | Wheat | nucleus | 68.15 | 66.19 |
| TraesCS4A01G030500.1 | Wheat | nucleus | 68.89 | 65.96 |
| TraesCS6A01G040200.1 | Wheat | nucleus | 67.41 | 65.94 |
| TraesCS4B01G204400.1 | Wheat | nucleus | 72.59 | 65.77 |
| HORVU7Hr1G110290.1 | Barley | nucleus | 49.63 | 65.69 |
| Zm00001d044247_P001 | Maize | plastid | 71.85 | 65.54 |
| TraesCS7D01G477400.1 | Wheat | nucleus | 68.89 | 65.49 |
| Zm00001d011236_P001 | Maize | plastid | 72.59 | 65.33 |
| EES15460 | Sorghum | nucleus | 73.33 | 65.13 |
| Os03t0279000-00 | Rice | nucleus | 73.33 | 65.13 |
| TraesCS1A01G228700.1 | Wheat | nucleus | 73.33 | 65.13 |
| TraesCS1B01G244900.1 | Wheat | nucleus | 73.33 | 65.13 |
| TraesCS1B01G245300.1 | Wheat | nucleus | 73.33 | 65.13 |
| TraesCS1D01G233300.1 | Wheat | nucleus | 73.33 | 65.13 |
| TraesCS3D01G088900.1 | Wheat | nucleus | 73.33 | 65.13 |
| TraesCS4A01G260400.1 | Wheat | nucleus | 73.33 | 65.13 |
| TraesCS4D01G054200.1 | Wheat | nucleus | 73.33 | 65.13 |
| Zm00001d007084_P001 | Maize | plastid | 73.33 | 65.13 |
| TraesCS6D01G046400.1 | Wheat | nucleus | 67.41 | 65.0 |
| TraesCS6A01G040400.1 | Wheat | nucleus | 66.67 | 64.75 |
| Os01t0153100-00 | Rice | nucleus | 73.33 | 64.71 |
| Os05t0574300-00 | Rice | nucleus | 72.59 | 64.47 |
| Zm00001d051591_P001 | Maize | plastid | 73.33 | 64.29 |
| EES15092 | Sorghum | nucleus | 71.85 | 64.24 |
| TraesCS3A01G088800.1 | Wheat | nucleus | 71.85 | 64.24 |
| EER96770 | Sorghum | nucleus | 72.59 | 64.05 |
| HORVU1Hr1G049920.1 | Barley | nucleus | 72.59 | 64.05 |
| TraesCS1B01G192500.1 | Wheat | nucleus | 72.59 | 64.05 |
| HORVU6Hr1G087190.1 | Barley | nucleus | 71.11 | 64.0 |
| Zm00001d050100_P001 | Maize | plastid | 71.11 | 64.0 |
| TraesCS1B01G357600.1 | Wheat | nucleus | 68.15 | 63.89 |
| TraesCS4B01G054200.1 | Wheat | nucleus | 71.85 | 63.82 |
| Zm00001d005789_P001 | Maize | plastid | 71.85 | 63.82 |
| TraesCS5D01G020000.1 | Wheat | nucleus | 74.07 | 63.69 |
| TraesCS4B01G275400.1 | Wheat | nucleus | 72.59 | 63.64 |
| EER97675 | Sorghum | nucleus | 71.11 | 63.58 |
| TraesCS1B01G416600.1 | Wheat | nucleus | 71.11 | 63.58 |
| Zm00001d020580_P001 | Maize | plastid | 71.11 | 63.58 |
| TraesCS5B01G058200.1 | Wheat | nucleus | 74.81 | 63.52 |
| TraesCS5B01G064900.1 | Wheat | nucleus, unclear | 74.81 | 63.52 |
| TraesCS6B01G048500.1 | Wheat | unclear | 68.15 | 63.45 |
| OQU87075 | Sorghum | nucleus | 71.85 | 63.4 |
| Os01t0149600-01 | Rice | nucleus | 71.85 | 63.4 |
| Os01t0152900-00 | Rice | nucleus | 71.85 | 63.4 |
| TraesCS1D01G396600.1 | Wheat | golgi, nucleus, unclear | 70.37 | 63.33 |
| Zm00001d025913_P001 | Maize | plastid | 70.37 | 63.33 |
| EES07386 | Sorghum | nucleus | 72.59 | 63.23 |
| TraesCS3A01G102500.1 | Wheat | nucleus | 67.41 | 63.19 |
| TraesCS6A01G034500.1 | Wheat | nucleus | 67.41 | 63.19 |
| TraesCS6A01G035000.1 | Wheat | nucleus | 67.41 | 63.19 |
| TraesCS6B01G048800.1 | Wheat | nucleus | 67.41 | 63.19 |
| TraesCS6B01G049100.1 | Wheat | nucleus | 67.41 | 63.19 |
| TraesCS6B01G049300.1 | Wheat | nucleus | 67.41 | 63.19 |
| TraesCS4A01G030400.1 | Wheat | nucleus | 71.85 | 62.99 |
| TraesCS5A01G051900.1 | Wheat | nucleus | 72.59 | 62.82 |
| TraesCS6D01G040600.1 | Wheat | nucleus | 67.41 | 62.76 |
| Os01t0152300-00 | Rice | nucleus | 71.11 | 62.75 |
| Zm00001d032070_P001 | Maize | plastid | 69.63 | 62.67 |
| TraesCS3D01G351500.1 | Wheat | nucleus | 57.04 | 62.6 |
| Os01t0153300-00 | Rice | nucleus | 71.85 | 62.58 |
| GSMUA_Achr7P15260_001 | Banana | nucleus | 70.37 | 62.5 |
| TraesCS6B01G082600.1 | Wheat | nucleus | 66.67 | 62.5 |
| TraesCS1A01G388600.1 | Wheat | nucleus | 70.37 | 62.09 |
| TraesCS1D01G194600.1 | Wheat | nucleus | 70.37 | 62.09 |
| TraesCS3B01G390300.1 | Wheat | nucleus | 61.48 | 61.94 |
| HORVU7Hr1G110130.1 | Barley | nucleus | 54.07 | 61.86 |
| TraesCS1D01G232900.1 | Wheat | nucleus | 71.85 | 61.78 |
| Solyc10g044580.1.1 | Tomato | nucleus | 61.48 | 61.48 |
| TraesCS1A01G361600.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS1A01G367900.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS1A01G368000.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS1B01G386200.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS1B01G386400.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS1B01G386700.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS1D01G366300.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS1D01G373800.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS1D01G373900.1 | Wheat | nucleus | 69.63 | 61.44 |
| TraesCS6D01G040200.1 | Wheat | nucleus | 65.93 | 61.38 |
| HORVU7Hr1G110190.1 | Barley | nucleus | 60.0 | 61.36 |
| HORVU7Hr1G110330.2 | Barley | nucleus | 54.07 | 61.34 |
| TraesCS6B01G376900.1 | Wheat | nucleus | 68.89 | 61.18 |
| TraesCS1B01G378300.1 | Wheat | nucleus | 68.89 | 60.78 |
| TraesCS1B01G386500.1 | Wheat | nucleus | 68.89 | 60.78 |
| TraesCS1B01G386600.1 | Wheat | nucleus | 68.89 | 60.78 |
| HORVU6Hr1G005950.2 | Barley | nucleus | 69.63 | 60.65 |
| TraesCS6B01G084900.1 | Wheat | nucleus | 68.89 | 60.39 |
| HORVU6Hr1G008320.1 | Barley | nucleus | 69.63 | 59.87 |
| TraesCS6D01G326800.1 | Wheat | nucleus, unclear | 68.15 | 59.74 |
| TraesCSU01G081100.1 | Wheat | nucleus | 67.41 | 59.09 |
| HORVU1Hr1G091370.1 | Barley | nucleus | 68.89 | 58.49 |
| HORVU6Hr1G015760.1 | Barley | nucleus, plastid | 70.37 | 58.28 |
| HORVU6Hr1G006110.1 | Barley | nucleus, plastid | 50.37 | 58.12 |
| HORVU3Hr1G013530.1 | Barley | nucleus | 70.37 | 57.93 |
| TraesCS5D01G393900.1 | Wheat | nucleus | 69.63 | 57.32 |
| HORVU4Hr1G070240.1 | Barley | nucleus | 70.37 | 57.23 |
| HORVU7Hr1G110170.1 | Barley | nucleus | 68.15 | 56.44 |
| HORVU1Hr1G072190.4 | Barley | nucleus | 73.33 | 56.25 |
| HORVU4Hr1G009040.2 | Barley | nucleus | 71.11 | 55.81 |
| HORVU3Hr1G013680.1 | Barley | nucleus | 69.63 | 55.29 |
| HORVU2Hr1G077630.1 | Barley | nucleus | 74.07 | 55.25 |
| HORVU1Hr1G058500.1 | Barley | nucleus | 74.07 | 54.64 |
| HORVU1Hr1G085540.1 | Barley | nucleus | 71.85 | 54.19 |
| HORVU4Hr1G073130.1 | Barley | nucleus, plastid | 72.59 | 53.55 |
| HORVU6Hr1G083110.1 | Barley | nucleus | 67.41 | 53.22 |
| HORVU7Hr1G110090.1 | Barley | nucleus, plastid | 68.15 | 53.18 |
| HORVU1Hr1G078480.6 | Barley | nucleus | 70.37 | 52.78 |
| HORVU1Hr1G078530.3 | Barley | nucleus | 70.37 | 52.78 |
| HORVU5Hr1G094500.1 | Barley | nucleus, plastid | 74.07 | 47.17 |
| HORVU1Hr1G056530.1 | Barley | nucleus, plastid | 73.33 | 46.92 |
| HORVU3Hr1G015810.1 | Barley | nucleus, plastid | 72.59 | 46.89 |
| Os08t0490900-00 | Rice | nucleus | 73.33 | 46.7 |
| HORVU3Hr1G086580.1 | Barley | nucleus, plastid | 60.0 | 44.02 |
| HORVU3Hr1G086610.2 | Barley | nucleus | 67.41 | 43.33 |
| Zm00001d048491_P001 | Maize | plastid | 72.59 | 41.18 |
| HORVU1Hr1G066130.1 | Barley | nucleus | 74.07 | 41.15 |
| GSMUA_Achr6P33320_001 | Banana | nucleus | 62.96 | 41.06 |
| TraesCS6B01G081700.1 | Wheat | nucleus | 46.67 | 38.41 |
| TraesCS6D01G063200.1 | Wheat | nucleus | 48.15 | 32.83 |
| TraesCS6A01G061400.1 | Wheat | nucleus | 47.41 | 30.62 |
| PGSC0003DMT400074018 | Potato | nucleus | 71.85 | 25.46 |
| PGSC0003DMT400018366 | Potato | mitochondrion, nucleus | 49.63 | 24.54 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:102589599 | MapMan:12.1.3 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2B |
| InterPro:IPR009072 | UniProt:M1CT06 | PFAM:PF00125 | EnsemblPlantsGene:PGSC0003DMG400028771 | PGSC:PGSC0003DMG400028771 | EnsemblPlants:PGSC0003DMT400074020 |
| PRINTS:PR00621 | PANTHER:PTHR23428 | PANTHER:PTHR23428:SF172 | SMART:SM00427 | SUPFAM:SSF47113 | UniParc:UPI0002954947 |
| RefSeq:XP_006339956.1 | SEG:seg | : | : | : | : |
Description
Histone H2B.3 [Source:PGSC_GENE;Acc:PGSC0003DMG400028771]
Coordinates
chr10:-:33324187..33324594
Molecular Weight (calculated)
14986.2 Da
IEP (calculated)
10.685
GRAVY (calculated)
-0.601
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQNAEKKSS AEKAPATAAK KSKAGKKLPK DASGDKKNKR SMNSAETYKI YIFKVLKQVH PDIEISSKAM GIMNNFINDI FERLAEEFTK LARYNKKPTI
101: TSREIQTAVR LVLHSELAKH VVSEGTKAVA KFTSS
101: TSREIQTAVR LVLHSELAKH VVSEGTKAVA KFTSS
001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
Arabidopsis Description
HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.