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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G061400.1 Wheat nucleus 89.9 85.17
TraesCS6B01G081700.1 Wheat nucleus 69.19 83.54
Zm00001d032070_P001 Maize plastid 48.48 64.0
Zm00001d050100_P001 Maize plastid 48.48 64.0
TraesCS4D01G054200.1 Wheat nucleus 48.99 63.82
EES15092 Sorghum nucleus 48.48 63.58
Os01t0153100-00 Rice nucleus 48.99 63.4
Zm00001d025913_P001 Maize plastid 47.98 63.33
GSMUA_Achr9P04060_001 Banana nucleus 37.37 63.25
TraesCS2D01G310800.1 Wheat nucleus 48.48 63.16
TraesCS1D01G194600.1 Wheat nucleus 48.48 62.75
TraesCS1D01G233300.1 Wheat nucleus 47.98 62.5
TraesCS3D01G088900.1 Wheat nucleus 47.98 62.5
TraesCS7D01G477300.1 Wheat nucleus 44.44 61.97
TraesCS3D01G342400.1 Wheat nucleus 42.93 61.59
TraesCS7D01G477400.1 Wheat nucleus 43.94 61.27
TraesCS6D01G046200.1 Wheat nucleus, unclear 41.92 61.03
TraesCS6D01G046500.1 Wheat nucleus 20.2 60.61
TraesCS5D01G020000.1 Wheat nucleus 47.47 59.87
TraesCS4D01G205300.1 Wheat nucleus 42.93 59.86
TraesCS6D01G046600.1 Wheat nucleus 40.91 59.56
TraesCS6D01G046400.1 Wheat nucleus 41.92 59.29
TraesCS3D01G099000.1 Wheat nucleus 40.4 58.82
TraesCS7D01G485700.1 Wheat nucleus 40.91 58.27
TraesCS3D01G075900.1 Wheat nucleus 39.9 58.09
TraesCS6D01G040600.1 Wheat nucleus 42.42 57.93
Bra006685.1-P Field mustard nucleus 40.91 57.45
AT5G59910.1 Thale cress nucleus 43.43 57.33
KRH22818 Soybean nucleus 38.38 57.14
AT2G28720.1 Thale cress nucleus 43.43 56.95
PGSC0003DMT400043578 Potato nucleus 40.4 56.74
TraesCS1D01G232900.1 Wheat nucleus 44.95 56.69
Bra002520.1-P Field mustard nucleus 42.93 56.67
TraesCS3D01G351300.1 Wheat nucleus 38.89 56.62
TraesCS3D01G351400.1 Wheat nucleus 38.89 56.62
AT5G22880.1 Thale cress nucleus 41.41 56.55
TraesCS6D01G040200.1 Wheat nucleus 41.41 56.55
Bra035677.1-P Field mustard nucleus 42.42 56.38
Bra038267.1-P Field mustard nucleus 38.89 56.2
VIT_06s0004g04230.t01 Wine grape nucleus 41.41 56.16
KRH19721 Soybean nucleus 39.39 56.12
Solyc03g071620.1.1 Tomato nucleus 39.9 56.03
AT3G45980.1 Thale cress nucleus 42.42 56.0
TraesCS1D01G396600.1 Wheat golgi, nucleus, unclear 42.42 56.0
KRH26542 Soybean nucleus 37.88 55.97
GSMUA_Achr2P19080_001 Banana nucleus 40.4 55.94
AT3G46030.1 Thale cress nucleus 40.91 55.86
Bra003150.1-P Field mustard nucleus 38.89 55.8
Bra039810.1-P Field mustard nucleus 38.89 55.8
PGSC0003DMT400060096 Potato nucleus 41.41 55.78
Solyc05g055440.1.1 Tomato nucleus 41.41 55.78
Bra011930.1-P Field mustard nucleus 41.92 55.7
PGSC0003DMT400070383 Potato nucleus 39.9 55.63
TraesCS1D01G366300.1 Wheat nucleus 42.93 55.56
TraesCS1D01G373800.1 Wheat nucleus 42.93 55.56
TraesCS1D01G373900.1 Wheat nucleus 42.93 55.56
PGSC0003DMT400077939 Potato nucleus 40.91 55.48
AT1G07790.1 Thale cress nucleus 41.41 55.41
VIT_06s0004g04250.t01 Wine grape nucleus 41.41 55.41
Bra002436.1-P Field mustard nucleus 39.39 55.32
VIT_06s0004g04300.t01 Wine grape nucleus 42.42 55.26
VIT_13s0019g05370.t01 Wine grape nucleus 40.4 55.17
AT3G53650.1 Thale cress nucleus 38.38 55.07
Bra007018.1-P Field mustard nucleus 38.38 55.07
KRG95819 Soybean nucleus 38.38 55.07
KRH67549 Soybean nucleus 38.38 55.07
PGSC0003DMT400022074 Potato nucleus 39.9 54.86
PGSC0003DMT400070382 Potato nucleus 39.9 54.86
Solyc11g007920.1.1 Tomato nucleus 39.9 54.86
Bra000483.1-P Field mustard nucleus 42.93 54.84
Solyc06g075800.1.1 Tomato nucleus 40.4 54.79
KRH34681 Soybean nucleus 37.88 54.74
TraesCS6D01G326800.1 Wheat nucleus, unclear 42.42 54.55
PGSC0003DMT400074994 Potato nucleus 40.4 54.42
Solyc06g005390.1.1 Tomato nucleus 40.4 54.42
KRG92106 Soybean nucleus 37.37 54.41
AT2G37470.1 Thale cress nucleus 37.88 54.35
Solyc11g066430.1.1 Tomato nucleus 38.38 54.29
Bra020275.1-P Field mustard nucleus 38.89 54.23
Bra006639.1-P Field mustard nucleus 39.39 54.17
PGSC0003DMT400022099 Potato nucleus 39.39 54.17
KRH29831 Soybean nucleus 40.4 54.05
KRH29832 Soybean nucleus 40.4 54.05
KRH29836 Soybean nucleus 40.4 54.05
KRH29833 Soybean nucleus 38.89 53.85
KRH24831 Soybean nucleus 40.4 53.69
KRH24833 Soybean nucleus 40.4 53.69
Solyc11g007930.1.1 Tomato nucleus 37.37 53.62
PGSC0003DMT400001108 Potato nucleus 38.38 53.52
GSMUA_Achr7P15260_001 Banana nucleus 40.91 53.29
KRH24830 Soybean nucleus 39.9 53.02
Solyc06g074790.1.1 Tomato nucleus 37.88 52.82
Solyc12g013510.1.1 Tomato nucleus 36.87 52.52
TraesCS5D01G393900.1 Wheat nucleus 43.43 52.44
PGSC0003DMT400018456 Potato nucleus 37.37 52.11
PGSC0003DMT400018455 Potato nucleus 37.37 51.75
AT5G02570.1 Thale cress nucleus 34.34 51.52
Solyc02g038690.1.1 Tomato nucleus 34.85 51.49
TraesCS3D01G351500.1 Wheat nucleus 31.82 51.22
Solyc06g074780.1.1 Tomato nucleus 36.87 51.05
AT3G09480.1 Thale cress nucleus 32.32 50.79
PGSC0003DMT400074020 Potato nucleus 32.83 48.15
Solyc10g044580.1.1 Tomato nucleus 30.81 45.19
CDX71015 Canola nucleus 13.64 40.91
VIT_06s0004g04240.t01 Wine grape nucleus 41.41 35.65
GSMUA_Achr6P33320_001 Banana nucleus 36.87 35.27
PGSC0003DMT400074018 Potato nucleus 27.78 14.44
Protein Annotations
Gene3D:1.10.20.10MapMan:12.1.3GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0046982
InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2BInterPro:IPR009072PFAM:PF00125PRINTS:PR00621
PANTHER:PTHR23428PANTHER:PTHR23428:SF175SMART:SM00427SUPFAM:SSF47113EnsemblPlantsGene:TraesCS6D01G063200EnsemblPlants:TraesCS6D01G063200.1
SEG:seg:::::
Description
No Description!
Coordinates
chr6D:-:29739716..29740312
Molecular Weight (calculated)
21488.7 Da
IEP (calculated)
10.448
GRAVY (calculated)
-0.925
Length
198 amino acids
Sequence
(BLAST)
001: MAPKAAEKEP ATEKAAEKKP AEKEPATEKA AEKEPAAEKA AEKKPAEKEP ATEKAAEKSP ATAGKKPEAK KRLPAGEMAS KAGGGKKRGQ KEGKRRKETY
101: KVHIYRVLKH VHGKELGITS KAMASMNSFV NDMFERLAAE AGKLARYNKK STIGPREIRT SVRLLLPGSL STTAFKAGDA AVDSFKNYKV FYVSSEEE
Best Arabidopsis Sequence Match ( AT2G28720.1 )
(BLAST)
001: MAPKAGKKPA EKKPAEKAPA EEEKVAEKAP AEKKPKAGKK LPKEAVTGGV EKKKKRVKKS TETYKIYIFK VLKQVHPDIG ISSKAMGIMN SFINDIFEKL
101: AQEASKLARY NKKPTITSRE IQTAVRLVLP GELAKHAVSE GTKAVTKFTS S
Arabidopsis Description
Histone H2B.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI96]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.