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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • endoplasmic reticulum 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES00399 Sorghum nucleus 96.05 97.33
EES00304 Sorghum nucleus 95.39 97.32
EES00305 Sorghum nucleus 94.74 96.64
EES03855 Sorghum nucleus 86.84 96.35
EER96770 Sorghum nucleus 96.71 96.08
TraesCS6D01G046500.1 Wheat nucleus 41.45 95.45
TraesCS4A01G260400.1 Wheat nucleus 95.39 95.39
TraesCS4D01G054200.1 Wheat nucleus 95.39 95.39
OQU92807 Sorghum nucleus 92.76 95.27
TraesCS7B01G394800.1 Wheat nucleus 60.53 94.85
TraesCS3D01G088900.1 Wheat nucleus 94.08 94.08
TraesCS6B01G055300.1 Wheat nucleus 59.21 93.75
TraesCS6B01G055500.1 Wheat nucleus 59.21 93.75
TraesCS7B01G394500.1 Wheat nucleus 59.21 93.75
Os05t0460475-00 Rice nucleus 65.13 93.4
EES15092 Sorghum nucleus 92.76 93.38
HORVU6Hr1G087190.1 Barley nucleus 92.11 93.33
GSMUA_Achr9P04060_001 Banana nucleus 71.71 93.16
TraesCS4B01G054200.1 Wheat nucleus 92.76 92.76
TraesCS3A01G088800.1 Wheat nucleus 92.11 92.72
TraesCS3A01G075800.1 Wheat nucleus 58.55 92.71
EES07386 Sorghum nucleus 94.08 92.26
OQU87075 Sorghum nucleus 92.76 92.16
TraesCS5A01G384300.1 Wheat nucleus 92.11 92.11
TraesCS6A01G040500.1 Wheat nucleus 82.24 91.91
TraesCS6D01G046200.1 Wheat nucleus, unclear 82.24 91.91
TraesCS6D01G046600.1 Wheat nucleus 82.24 91.91
TraesCS6D01G046400.1 Wheat nucleus 84.21 91.43
EER97675 Sorghum nucleus 90.79 91.39
TraesCS6A01G040400.1 Wheat nucleus 83.55 91.37
TraesCS3D01G342400.1 Wheat nucleus 82.89 91.3
TraesCS5B01G389100.1 Wheat nucleus 90.79 90.79
HORVU0Hr1G006420.1 Barley nucleus 82.24 90.58
HORVU3Hr1G034060.1 Barley nucleus 82.24 90.58
TraesCS7A01G490900.1 Wheat nucleus 82.24 90.58
TraesCS7A01G491000.1 Wheat nucleus 82.24 90.58
TraesCS7B01G394700.1 Wheat nucleus 82.24 90.58
TraesCS5D01G020000.1 Wheat nucleus 93.42 90.45
TraesCS6A01G086400.1 Wheat nucleus 80.26 90.37
TraesCS6B01G116000.1 Wheat nucleus 80.26 90.37
TraesCSU01G077200.1 Wheat nucleus 80.26 90.37
TraesCS7A01G491100.1 Wheat extracellular, nucleus, unclear 84.21 90.14
TraesCS7B01G394900.1 Wheat nucleus 84.21 90.14
TraesCS7D01G477300.1 Wheat nucleus 84.21 90.14
TraesCS6A01G040200.1 Wheat nucleus 81.58 89.86
TraesCS7B01G394600.1 Wheat nucleus 81.58 89.86
TraesCS3A01G357500.1 Wheat nucleus 80.26 89.71
TraesCS3D01G099000.1 Wheat nucleus 80.26 89.71
TraesCS3D01G351300.1 Wheat nucleus 80.26 89.71
TraesCS3D01G351400.1 Wheat nucleus 80.26 89.71
HORVU6Hr1G015790.1 Barley nucleus 79.61 89.63
TraesCS6A01G086200.1 Wheat nucleus 79.61 89.63
TraesCSU01G077400.1 Wheat nucleus 79.61 89.63
TraesCS7D01G477400.1 Wheat nucleus 83.55 89.44
TraesCS7B01G394100.1 Wheat nucleus 80.92 89.13
TraesCS7B01G394400.1 Wheat nucleus 80.92 89.13
EES18353 Sorghum nucleus 86.18 89.12
TraesCS3B01G390000.1 Wheat nucleus 79.61 88.97
TraesCS3D01G075900.1 Wheat nucleus 79.61 88.97
TraesCS3B01G114400.1 Wheat nucleus 78.95 88.89
TraesCS3B01G114600.1 Wheat nucleus 78.95 88.89
TraesCS3B01G390100.1 Wheat nucleus 78.95 88.89
KRH26542 Soybean nucleus 78.29 88.81
KRH22818 Soybean nucleus 77.63 88.72
TraesCS3A01G357400.1 Wheat nucleus 80.26 88.41
HORVU7Hr1G110290.1 Barley nucleus 59.21 88.24
PGSC0003DMT400077939 Potato nucleus 84.21 87.67
KRH19721 Soybean nucleus 79.61 87.05
TraesCS7B01G405800.1 Wheat nucleus 79.61 87.05
TraesCS7D01G485700.1 Wheat nucleus 79.61 87.05
Solyc06g075800.1.1 Tomato nucleus 83.55 86.99
Bra007018.1-P Field mustard nucleus 78.95 86.96
AT2G37470.1 Thale cress nucleus 78.29 86.23
Bra039810.1-P Field mustard nucleus 78.29 86.23
KRG95819 Soybean nucleus 78.29 86.23
KRH67549 Soybean nucleus 78.29 86.23
KRH34681 Soybean nucleus 77.63 86.13
KRG92106 Soybean nucleus 76.97 86.03
TraesCS1D01G232900.1 Wheat nucleus 88.82 85.99
PGSC0003DMT400043578 Potato nucleus 79.61 85.82
AT3G46030.1 Thale cress nucleus 81.58 85.52
AT5G59910.1 Thale cress nucleus 84.21 85.33
Solyc03g071620.1.1 Tomato nucleus 78.95 85.11
VIT_06s0004g04230.t01 Wine grape nucleus 81.58 84.93
Bra003150.1-P Field mustard nucleus 76.97 84.78
PGSC0003DMT400070382 Potato nucleus 80.26 84.72
Bra038267.1-P Field mustard nucleus 76.32 84.67
Bra002520.1-P Field mustard nucleus 83.55 84.67
GSMUA_Achr2P19080_001 Banana nucleus 79.61 84.62
KRH29833 Soybean nucleus 79.61 84.62
Bra020275.1-P Field mustard nucleus 78.95 84.51
KRH29831 Soybean nucleus 82.24 84.46
KRH29832 Soybean nucleus 82.24 84.46
KRH29836 Soybean nucleus 82.24 84.46
VIT_06s0004g04250.t01 Wine grape nucleus 82.24 84.46
Bra006685.1-P Field mustard nucleus 78.29 84.4
VIT_13s0019g05370.t01 Wine grape nucleus 80.26 84.14
AT2G28720.1 Thale cress nucleus 83.55 84.11
AT5G02570.1 Thale cress nucleus 73.03 84.09
AT3G53650.1 Thale cress nucleus 76.32 84.06
AT3G45980.1 Thale cress nucleus 82.89 84.0
KRH24831 Soybean nucleus 82.24 83.89
KRH24833 Soybean nucleus 82.24 83.89
PGSC0003DMT400070383 Potato nucleus 78.29 83.8
PGSC0003DMT400074994 Potato nucleus 80.92 83.67
Solyc06g005390.1.1 Tomato nucleus 80.92 83.67
Solyc11g007920.1.1 Tomato nucleus 78.95 83.33
KRH24830 Soybean nucleus 81.58 83.22
Bra002436.1-P Field mustard nucleus 76.97 82.98
Solyc11g066430.1.1 Tomato nucleus 76.32 82.86
PGSC0003DMT400022074 Potato nucleus 78.29 82.64
PGSC0003DMT400022099 Potato nucleus 78.29 82.64
Solyc11g007930.1.1 Tomato nucleus 75.0 82.61
Bra011930.1-P Field mustard nucleus 80.92 82.55
Bra035677.1-P Field mustard nucleus 80.92 82.55
Solyc06g074790.1.1 Tomato nucleus 76.97 82.39
PGSC0003DMT400060096 Potato nucleus 79.61 82.31
TraesCS3D01G351500.1 Wheat nucleus 66.45 82.11
AT1G07790.1 Thale cress nucleus 79.61 81.76
AT3G09480.1 Thale cress nucleus 67.76 81.75
Solyc05g055440.1.1 Tomato nucleus 78.95 81.63
VIT_06s0004g04300.t01 Wine grape nucleus 81.58 81.58
HORVU4Hr1G009040.2 Barley nucleus 92.11 81.4
AT5G22880.1 Thale cress nucleus 77.63 81.38
Solyc12g013510.1.1 Tomato nucleus 74.34 81.3
Bra006639.1-P Field mustard nucleus 76.97 81.25
PGSC0003DMT400001108 Potato nucleus 75.66 80.99
PGSC0003DMT400018456 Potato nucleus 75.66 80.99
Solyc02g038690.1.1 Tomato nucleus 71.05 80.6
PGSC0003DMT400018455 Potato nucleus 75.66 80.42
Solyc06g074780.1.1 Tomato nucleus 75.66 80.42
Bra000483.1-P Field mustard nucleus 81.58 80.0
HORVU6Hr1G005950.2 Barley nucleus 80.26 78.71
TraesCS3B01G390300.1 Wheat nucleus 69.08 78.36
GSMUA_Achr7P15260_001 Banana nucleus 78.29 78.29
TraesCS5D01G393900.1 Wheat nucleus 82.89 76.83
HORVU7Hr1G110170.1 Barley nucleus 82.24 76.69
HORVU6Hr1G008320.1 Barley nucleus 78.95 76.43
HORVU7Hr1G110130.1 Barley nucleus 59.21 76.27
HORVU1Hr1G091370.1 Barley nucleus 78.95 75.47
HORVU6Hr1G015760.1 Barley nucleus, plastid 79.61 74.23
HORVU7Hr1G110330.2 Barley nucleus 57.89 73.95
PGSC0003DMT400074020 Potato nucleus 65.13 73.33
HORVU3Hr1G013530.1 Barley nucleus 78.95 73.17
HORVU4Hr1G070240.1 Barley nucleus 79.61 72.89
HORVU7Hr1G110190.1 Barley nucleus 63.16 72.73
HORVU7Hr1G110090.1 Barley nucleus, plastid 82.24 72.25
HORVU3Hr1G013680.1 Barley nucleus 78.95 70.59
HORVU6Hr1G083110.1 Barley nucleus 76.97 68.42
HORVU6Hr1G006110.1 Barley nucleus, plastid 52.63 68.38
CDX71015 Canola nucleus 28.95 66.67
HORVU5Hr1G094500.1 Barley nucleus, plastid 91.45 65.57
Solyc10g044580.1.1 Tomato nucleus 55.92 62.96
Zm00001d048491_P001 Maize plastid 96.05 61.34
HORVU3Hr1G086580.1 Barley nucleus, plastid 67.76 55.98
VIT_06s0004g04240.t01 Wine grape nucleus 82.89 54.78
HORVU3Hr1G086610.2 Barley nucleus 74.34 53.81
GSMUA_Achr6P33320_001 Banana nucleus 69.08 50.72
EER98531 Sorghum nucleus 47.37 24.08
PGSC0003DMT400074018 Potato nucleus 56.58 22.57
Protein Annotations
Gene3D:1.10.20.10MapMan:12.1.3EntrezGene:8055359UniProt:C5YJD0EnsemblPlants:EES15460ProteinID:EES15460
ProteinID:EES15460.1GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005694
GO:GO:0046982InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2BInterPro:IPR009072PFAM:PF00125
PRINTS:PR00621ScanProsite:PS00357PANTHER:PTHR23428PANTHER:PTHR23428:SF60SMART:SM00427EnsemblPlantsGene:SORBI_3007G221800
SUPFAM:SSF47113unigene:Sbi.17822UniParc:UPI0001A87AB1RefSeq:XP_002445965.1SEG:seg:
Description
hypothetical protein
Coordinates
chr7:-:64983444..64984191
Molecular Weight (calculated)
16480.1 Da
IEP (calculated)
10.743
GRAVY (calculated)
-0.739
Length
152 amino acids
Sequence
(BLAST)
001: MAPKAEKKPA AKKPAEEEPS TEKAEKAPAG KKPKAEKRLP SGKSAGKEGG EKKGKKKAKK SVETYKIYIF KVLKQVHPDI GISSKAMSIM NSFINDIFEK
101: LAAEAAKLAR YNKKPTITSR EIQTSVRLVL PGELAKHAVS EGTKAVTKFT SS
Best Arabidopsis Sequence Match ( AT1G07790.1 )
(BLAST)
001: MAPRAEKKPA EKKTAAERPV EENKAAEKAP AEKKPKAGKK LPPKEAGDKK KKRSKKNVET YKIYIFKVLK QVHPDIGISS KAMGIMNSFI NDIFEKLAQE
101: SSKLARYNKK PTITSREIQT AVRLVLPGEL AKHAVSEGTK AVTKFTSS
Arabidopsis Description
HTB1Histone H2B.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.