Factsheet for Solyc02g062740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040081	Potato	mitochondrion	34.0	99.51
Solyc04g005250.2.1	Tomato	nucleus	72.14	71.66
Solyc10g078190.1.1	Tomato	nucleus	70.48	69.79
HORVU4Hr1G017920.1	Barley	cytosol	9.29	69.14
Os11t0109200-00	Rice	plastid	18.91	68.26
VIT_14s0066g01040.t01	Wine grape	cytosol	55.56	62.97
TraesCS6A01G124200.1	Wheat	peroxisome	22.06	62.15
TraesCSU01G224900.1	Wheat	peroxisome	38.14	61.33
Zm00001d044187_P001	Maize	cytosol	23.05	56.73
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	41.79	55.38
TraesCS3D01G454900.1	Wheat	peroxisome	41.29	55.21
KRG93790	Soybean	cytosol	8.62	54.17
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	42.12	52.05
Os03t0110800-01	Rice	nucleus	49.75	50.25
HORVU6Hr1G081790.1	Barley	nucleus	44.28	49.44
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	35.49	49.31
Zm00001d048516_P001	Maize	nucleus	49.25	49.25
GSMUA_Achr8P33680_001	Banana	cytosol	40.96	48.53
EES00541	Sorghum	nucleus	48.59	48.19
EER95283	Sorghum	nucleus	45.77	47.92
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	42.12	47.65
OQU93413	Sorghum	nucleus	47.93	47.61
GSMUA_Achr11P...	Banana	nucleus	36.15	47.29
HORVU3Hr1G098970.1	Barley	nucleus	39.64	47.14
TraesCS5A01G241800.1	Wheat	nucleus	48.09	46.93
TraesCS5D01G248300.1	Wheat	nucleus	47.93	46.76
TraesCS6A01G338800.1	Wheat	nucleus	46.6	46.45
TraesCS6D01G319500.2	Wheat	nucleus	46.27	46.12
TraesCSU01G124200.1	Wheat	nucleus	46.1	46.1
TraesCSU01G140500.1	Wheat	nucleus	45.61	45.76
TraesCS5A01G553300.3	Wheat	nucleus	45.27	44.75
TraesCSU01G140600.1	Wheat	nucleus	45.77	44.52
TraesCS4A01G267400.1	Wheat	nucleus	31.18	43.93
GSMUA_Achr3P23940_001	Banana	nucleus	43.45	43.59
HORVU4Hr1G089730.3	Barley	nucleus	25.7	43.42
TraesCS4B01G012300.2	Wheat	cytosol	22.89	43.4
TraesCS4D01G046800.1	Wheat	nucleus	43.12	43.26
OQU87185	Sorghum	cytosol	16.75	42.8
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	40.63	42.39
Zm00001d027329_P002	Maize	nucleus	49.42	42.15
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	40.3	41.75
Os12t0108900-00	Rice	cytosol, nucleus	24.54	41.57
TraesCS3A01G461500.1	Wheat	nucleus	43.78	41.12
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	39.47	40.41
TraesCS3A01G067600.1	Wheat	nucleus	43.45	34.52
TraesCS6D01G114500.1	Wheat	mitochondrion	25.04	31.66
HORVU7Hr1G000490.1	Barley	cytosol	1.33	25.0
Solyc05g053260.2.1	Tomato	cytosol	20.07	21.57

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	GO:GO:0003674
GO:GO:0003824	GO:GO:0003886	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	GO:GO:0090116
InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380	UniProt:K4B6G2	PFAM:PF00145	PFscan:PS50030
PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335
EnsemblPlantsGene:Solyc02g062740.2	EnsemblPlants:Solyc02g062740.2.1	InterPro:UBA	UniParc:UPI000276828D	SEG:seg	:

Description

No Description!

Coordinates

chr2:+:34506487..34518271

Molecular Weight (calculated)

68037.9 Da

IEP (calculated)

4.528

GRAVY (calculated)

-0.504

Length

603 amino acids

Sequence
(BLAST)

001: MDKHLSEEDS DNIDWDTEDE LEIQDTTFSS CRDLRTNGQY AISGDGEASS SSVPGQSTFI QKFLVMGFSE ESIAKAIEQN GENSDLVLDA LLTLKAIEDS
101: PEEQPSASPH LEPCINSDDS SSEYNENFLD DVYDEDSWSS DSDYCTNSVK QCYVKEESNS LSEKEQTILF LANMGYPVEE VSIAMERCGP EASVSELTDF
201: ICAAQMAREE DPYLPEDVKP KLNHGSGGYK KRKMFNQLCK SKKPRAIFDE ETIRLPKPMI GFGVPTESVS AIVRRTIPEQ AFGPPFFYYE NVALAPKGVW
301: DTISRFLYDI EPEFVDSKYF CATARKRGYI HNLPTENRFP LLPLPPRTIN EALPLTKKWW PSWDPRTKLN CLQTAIGSAR LTDRIRKAVE AFDGEPPMRV
401: QKFVLDQCRK WNLVWVGRNK VAPLEPDEFE MLLGFPKNHT RGGGISRTDR YKSLGNSFQV DTVAYHLSVL KDMFPNGMNV LSLFSGIGGA EVALYRLGIQ
501: LNNVVSVEKS EVNRNIVRSW WEQTNQRGNL IDFDDVQQLN GDRLEQLIDS CGGFDLLIGG SPCNNLAGSN RVSRDGLEGK ESSLFYDYVR ILDLVKSIMS
601: RQR

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.