Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0020g00450.t01 | Wine grape | nucleus | 45.99 | 36.24 |
| KRH50633 | Soybean | cytosol | 37.61 | 30.4 |
| KRH02428 | Soybean | nucleus | 39.04 | 30.04 |
| Os05t0133900-02 | Rice | nucleus | 31.73 | 26.18 |
| KXG21224 | Sorghum | cytosol | 29.59 | 25.3 |
| HORVU5Hr1G012110.2 | Barley | cytosol | 29.06 | 25.23 |
| TraesCS5B01G057300.1 | Wheat | cytosol | 28.52 | 24.73 |
| Zm00001d010928_P001 | Maize | nucleus | 28.88 | 24.58 |
| TraesCS5D01G062400.2 | Wheat | cytosol | 28.34 | 24.57 |
| AT3G17310.1 | Thale cress | cytosol | 29.59 | 23.38 |
| TraesCS7D01G003200.1 | Wheat | nucleus | 25.49 | 22.99 |
| CDX95858 | Canola | cytosol | 28.7 | 22.77 |
| TraesCS7A01G002900.3 | Wheat | plastid | 24.96 | 22.47 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 28.34 | 22.21 |
| TraesCS4A01G495700.1 | Wheat | cytosol | 19.25 | 21.6 |
| HORVU7Hr1G000410.34 | Barley | mitochondrion | 21.21 | 20.1 |
| Solyc02g062740.2.1 | Tomato | nucleus | 21.57 | 20.07 |
| GSMUA_Achr10P... | Banana | cytosol | 14.62 | 19.25 |
| CDY13817 | Canola | plastid | 18.72 | 19.23 |
| Bra022208.1-P | Field mustard | plasma membrane, vacuole | 30.48 | 19.08 |
| Solyc10g078190.1.1 | Tomato | nucleus | 20.68 | 19.05 |
| CDX82030 | Canola | endoplasmic reticulum | 18.72 | 18.68 |
| CDX92125 | Canola | plasma membrane, vacuole | 29.41 | 18.67 |
| Bra031188.1-P | Field mustard | nucleus | 18.72 | 18.36 |
| Solyc04g005250.2.1 | Tomato | nucleus | 19.61 | 18.12 |
Protein Annotations
| EnsemblPlants:Solyc05g053260.2.1 | EnsemblPlantsGene:Solyc05g053260.2 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | InterPro:IPR030380 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | PANTHER:PTHR23068 |
| PANTHER:PTHR23068:SF11 | PFscan:PS51680 | SEG:seg | SUPFAM:SSF53335 | UniParc:UPI00027662FB | UniProt:K4C206 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:63396416..63412638
Molecular Weight (calculated)
63897.6 Da
IEP (calculated)
5.182
GRAVY (calculated)
-0.482
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKVEDPYSE FPSLYTYTMP MGDNIASSSG SNVRSSLLTM GFKASLVDKA IEEKGEDNID LLLETLFAKS DPPRAESSDS LDSLFCDDED INSSAKYDGD
101: AHIKEEPDPC IGVCDDKRVS LLAMSFSLDE VEFAISKLGE AAPVNELVDV IFAARIAGNY KKDDDDDVSV VEIKERNKEC TTESLFGTME KTLKLLEMGF
201: SENEVSTVIE KFGSEVPLEE LANLIIDPSS RRRMDKHLLN SLGRNVSIGF NPVAVKKEEY SVDTSESREL DLLEKLKGKR PKENYIDEID TKRPKSEYDE
301: AFNNSLGPSW QEILGINTTR PYKVHRRAIH QRPRVLDCHD TQKLSMPNSC RSLDKMVAKA PYFFYGNVMN LSHDSWVRIS QFLYAIEPEF VHTQLFSALS
401: RKEGYVHNLP SENRFHIVPK PPMTIQEAVP SSKKWWPSWD TRKHLNGINS ETSVVSQLCD RLERTVSDAQ GFPSVDRQRD ILNQSQIFNL VWVGRYKLAA
501: VGPEQIERIL GYPENHTRVA AFSLMERLLS LKHCFQWYWW SRSCIASPWY SLKSCCLNRG F
101: AHIKEEPDPC IGVCDDKRVS LLAMSFSLDE VEFAISKLGE AAPVNELVDV IFAARIAGNY KKDDDDDVSV VEIKERNKEC TTESLFGTME KTLKLLEMGF
201: SENEVSTVIE KFGSEVPLEE LANLIIDPSS RRRMDKHLLN SLGRNVSIGF NPVAVKKEEY SVDTSESREL DLLEKLKGKR PKENYIDEID TKRPKSEYDE
301: AFNNSLGPSW QEILGINTTR PYKVHRRAIH QRPRVLDCHD TQKLSMPNSC RSLDKMVAKA PYFFYGNVMN LSHDSWVRIS QFLYAIEPEF VHTQLFSALS
401: RKEGYVHNLP SENRFHIVPK PPMTIQEAVP SSKKWWPSWD TRKHLNGINS ETSVVSQLCD RLERTVSDAQ GFPSVDRQRD ILNQSQIFNL VWVGRYKLAA
501: VGPEQIERIL GYPENHTRVA AFSLMERLLS LKHCFQWYWW SRSCIASPWY SLKSCCLNRG F
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.