Factsheet for Solyc04g005250.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
plastid 1
cytosol 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004867	Potato	nucleus	83.86	83.86
Solyc10g078190.1.1	Tomato	nucleus	73.48	73.23
Solyc02g062740.2.1	Tomato	nucleus	71.66	72.14
Os11t0109200-00	Rice	plastid	18.29	66.47
HORVU4Hr1G017920.1	Barley	cytosol	8.73	65.43
TraesCS6A01G124200.1	Wheat	peroxisome	21.42	60.75
VIT_14s0066g01040.t01	Wine grape	cytosol	52.88	60.34
TraesCSU01G224900.1	Wheat	peroxisome	36.24	58.67
Zm00001d044187_P001	Maize	cytosol	21.58	53.47
TraesCS3D01G454900.1	Wheat	peroxisome	39.37	52.99
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	39.21	52.31
KRG93790	Soybean	cytosol	8.07	51.04
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	39.54	49.18
Os03t0110800-01	Rice	nucleus	48.27	49.08
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	34.1	47.7
HORVU6Hr1G081790.1	Barley	nucleus	42.34	47.59
GSMUA_Achr8P33680_001	Banana	cytosol	39.7	47.35
Zm00001d048516_P001	Maize	nucleus	46.46	46.77
EER95283	Sorghum	nucleus	43.99	46.35
TraesCS5D01G248300.1	Wheat	nucleus	47.12	46.28
TraesCS5A01G241800.1	Wheat	nucleus	47.12	46.28
EES00541	Sorghum	nucleus	46.29	46.22
OQU93413	Sorghum	nucleus	45.96	45.96
TraesCS4B01G012300.2	Wheat	cytosol	23.72	45.28
TraesCSU01G124200.1	Wheat	nucleus	44.98	45.27
GSMUA_Achr11P...	Banana	nucleus	34.1	44.9
HORVU3Hr1G098970.1	Barley	nucleus	37.23	44.58
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	39.04	44.47
TraesCS6A01G338800.1	Wheat	nucleus	44.32	44.46
TraesCS6D01G319500.2	Wheat	nucleus	44.15	44.3
TraesCS5A01G553300.3	Wheat	nucleus	43.99	43.77
GSMUA_Achr3P23940_001	Banana	nucleus	43.16	43.59
TraesCS4A01G267400.1	Wheat	nucleus	30.31	42.99
TraesCS4D01G046800.1	Wheat	nucleus	42.34	42.76
TraesCSU01G140500.1	Wheat	nucleus	42.34	42.76
OQU87185	Sorghum	cytosol	16.47	42.37
TraesCSU01G140600.1	Wheat	nucleus	42.5	41.61
Os12t0108900-00	Rice	cytosol, nucleus	24.05	41.01
HORVU4Hr1G089730.3	Barley	nucleus	24.05	40.9
Zm00001d027329_P002	Maize	nucleus	47.45	40.74
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	38.22	40.14
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	38.06	39.69
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	37.89	39.05
TraesCS3A01G461500.1	Wheat	nucleus	39.54	37.38
TraesCS3A01G067600.1	Wheat	nucleus	41.85	33.47
TraesCS6D01G114500.1	Wheat	mitochondrion	24.38	31.03
HORVU7Hr1G000490.1	Barley	cytosol	1.15	21.88
Solyc05g053260.2.1	Tomato	cytosol	18.12	19.61

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380
UniProt:K4BND1	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3
InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc04g005250.2	EnsemblPlants:Solyc04g005250.2.1	InterPro:UBA
UniParc:UPI00027661C0	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:185839..189158

Molecular Weight (calculated)

68710.9 Da

IEP (calculated)

4.485

GRAVY (calculated)

-0.492

Length

607 amino acids

Sequence
(BLAST)

001: MDNNFSGEDN DSIDWDTEDE LEIQEMPDAT FSSCTNLRSV GYHTVSGHRE ARSSSEPCQS KFIQQFIVMG FPEESIAKAI EQNGENEGLV LDALLTFKAL
101: EDSPEEQPST STQMEPCITS DDSSSQYNEN FLDDVSEDDS WSLDSDNCVN SAKQSYLNDD NCSLSENEKT LLFLANMGYP AEEASIAMER CGPEAPFPEL
201: IDFMCAAQMA REEDVHLPED EKPKLNSGGY KRKMYNEVRV KKKQRAITDE ETIHLPRPMI GFGVPTESLP AVVKRTLPEQ AIGPPFFYYE NVALAPKGVW
301: DTMTRFLYDI EPEFVDSKYF CATARKRGYI HNLPIEDRFP LLPLPPRTIH EAFPLTKKWW PSWDTRTKLN CLQTSIGSAR LADRIRKAMK AMENFDSEPP
401: LMVQKYVLDE CRKWNLLWVG RNKVSPLETD EFEMLMGFPR NHTRGGGISR TDRYKSLGNS FQVDTVAYHL SVLKDLYPNG INVLSLFSGI GGAEVALYRL
501: GIPLNNVVAV EISEVNRNIL RSWWEQTNQK GNLIDFHDIQ QLNGDVLEQM IDSIGGFDLV IGGSPCNNLT GSNRVTRDGL EGKDSSLFYD YVRVVDLVKS
601: IMSNRRV

Best Arabidopsis Sequence Match ( AT5G15380.1 )
(BLAST)

001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR

Arabidopsis Description

DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.