Factsheet for PGSC0003DMT400004867

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040081	Potato	mitochondrion	29.16	85.92
Solyc04g005250.2.1	Tomato	nucleus	83.86	83.86
PGSC0003DMT400018502	Potato	nucleus	70.18	69.95
Os11t0109200-00	Rice	plastid	18.45	67.07
HORVU4Hr1G017920.1	Barley	cytosol	8.73	65.43
TraesCS6A01G124200.1	Wheat	peroxisome	21.42	60.75
VIT_14s0066g01040.t01	Wine grape	cytosol	53.21	60.71
TraesCSU01G224900.1	Wheat	peroxisome	36.74	59.47
Zm00001d044187_P001	Maize	cytosol	21.75	53.88
TraesCS3D01G454900.1	Wheat	peroxisome	39.87	53.66
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	39.87	53.19
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	40.53	50.41
Os03t0110800-01	Rice	nucleus	49.26	50.08
KRG93790	Soybean	cytosol	7.91	50.0
HORVU6Hr1G081790.1	Barley	nucleus	43.66	49.07
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	34.43	48.16
Zm00001d048516_P001	Maize	nucleus	47.45	47.76
TraesCS5A01G241800.1	Wheat	nucleus	48.6	47.73
GSMUA_Achr8P33680_001	Banana	cytosol	39.87	47.54
TraesCS5D01G248300.1	Wheat	nucleus	48.27	47.41
EER95283	Sorghum	nucleus	44.98	47.4
EES00541	Sorghum	nucleus	46.95	46.88
OQU93413	Sorghum	nucleus	46.62	46.62
HORVU3Hr1G098970.1	Barley	nucleus	38.88	46.55
TraesCSU01G124200.1	Wheat	nucleus	45.96	46.27
TraesCS4B01G012300.2	Wheat	cytosol	24.05	45.91
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	40.2	45.78
TraesCS6A01G338800.1	Wheat	nucleus	45.3	45.45
TraesCS6D01G319500.2	Wheat	nucleus	44.98	45.12
GSMUA_Achr11P...	Banana	nucleus	34.27	45.12
TraesCS5A01G553300.3	Wheat	nucleus	45.14	44.92
TraesCSU01G140500.1	Wheat	nucleus	43.99	44.43
GSMUA_Achr3P23940_001	Banana	nucleus	43.49	43.93
TraesCS4A01G267400.1	Wheat	nucleus	30.97	43.93
OQU87185	Sorghum	cytosol	16.97	43.64
TraesCSU01G140600.1	Wheat	nucleus	43.99	43.06
TraesCS4D01G046800.1	Wheat	nucleus	42.34	42.76
HORVU4Hr1G089730.3	Barley	nucleus	25.04	42.58
Os12t0108900-00	Rice	cytosol, nucleus	24.71	42.13
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	39.21	41.18
Zm00001d027329_P002	Maize	nucleus	47.78	41.02
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	39.04	40.72
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	38.39	39.56
TraesCS3A01G461500.1	Wheat	nucleus	40.36	38.16
TraesCS3A01G067600.1	Wheat	nucleus	42.34	33.86
TraesCS6D01G114500.1	Wheat	mitochondrion	24.55	31.24
HORVU7Hr1G000490.1	Barley	cytosol	1.32	25.0

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	EntrezGene:102598254	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase
GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR015940
InterPro:IPR030380	UniProt:M0ZP42	PFAM:PF00145	EnsemblPlantsGene:PGSC0003DMG400001934	PGSC:PGSC0003DMG400001934	EnsemblPlants:PGSC0003DMT400004867
PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM
SUPFAM:SSF53335	InterPro:UBA	UniParc:UPI000296559C	RefSeq:XP_006363553.1	SEG:seg	:

Description

DNA methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400001934]

Coordinates

chr00:-:12544378..12549462

Molecular Weight (calculated)

68344.2 Da

IEP (calculated)

4.363

GRAVY (calculated)

-0.482

Length

607 amino acids

Sequence
(BLAST)

001: MDNNFSGEDN DNIDWDTEDE LEIQEIPDAT FSSCTNLRNV GHHTVSGHGE ASSSSVPCQS KFIQQFIVMG FPEESIAKAI EQNGENEGLV LDALLTFKAL
101: EDSPEEQPST SAQMEPSISS DDSSSQCNEN VLDDVYEDDS WSSDSDNCMN SAKQTYLNDD NSSLSENENS LLFLANMGYP AEEASIAMER CGPEASFSEL
201: IDFMCAAQMA REEDVYLPED EKPKLNSGGY KRKMYNELPV RKKQRAITDE EPIHLPRPMI GFGVPTESLP AIVQRTLPEQ AIGPPFFYYE NVALAPKGVW
301: DTMSRFLYDV EPEFVDSKYF CATARKRGYI HNLPIEDRFP LLPLPPRTIH EAFPLTKKWW PSWDTRTKLN CLQTSIGSAR LADRIRKAMK AMENFDGEPP
401: LMVQKYVLDE CRKWNLLWVG RNKASPLETD EFEMLMGFPR NHTRGGGISR TDRYKSLGNA FQVDTVAYHL SVLKDLYPNG INVLSLFSGI GGAEVALYRL
501: GIPLNNVVSV EISEVNRNIL RSWWEQTNQK GNLIDFNDIQ QLNGDVLEQM IDSFGGFDLV IGGSPCNNLT GSNRVTRDGL EGKDSSLFYD YVRIVDLVKS
601: IMSNRRV

Best Arabidopsis Sequence Match ( AT5G15380.1 )
(BLAST)

001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR

Arabidopsis Description

DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.