Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G017920.1 | Barley | cytosol | 11.83 | 74.07 |
| HORVU3Hr1G098990.3 | Barley | cytosol, nucleus | 65.09 | 72.53 |
| Os11t0109200-00 | Rice | plastid | 21.5 | 65.27 |
| HORVU0Hr1G018360.1 | Barley | cytosol, peroxisome | 54.64 | 63.82 |
| TraesCS3A01G461500.1 | Wheat | nucleus | 78.11 | 61.68 |
| HORVU6Hr1G081790.1 | Barley | nucleus | 64.89 | 60.93 |
| PGSC0003DMT400040081 | Potato | mitochondrion | 24.65 | 60.68 |
| TraesCS3B01G504200.1 | Wheat | nucleus | 71.79 | 59.87 |
| HORVU4Hr1G089730.3 | Barley | nucleus | 39.65 | 56.3 |
| Zm00001d044187_P001 | Maize | cytosol | 26.82 | 55.51 |
| EER95283 | Sorghum | nucleus | 56.02 | 49.31 |
| HORVU6Hr1G032260.8 | Barley | nucleus, peroxisome | 57.0 | 49.07 |
| Os03t0110800-01 | Rice | nucleus | 57.2 | 48.58 |
| Zm00001d048516_P001 | Maize | nucleus | 57.2 | 48.09 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 33.53 | 47.75 |
| OQU93413 | Sorghum | nucleus | 56.21 | 46.95 |
| EES00541 | Sorghum | nucleus | 56.21 | 46.88 |
| Bra023480.1-P | Field mustard | cytosol | 39.65 | 45.17 |
| CDX85589 | Canola | nucleus | 39.45 | 44.94 |
| OQU87185 | Sorghum | cytosol | 20.51 | 44.07 |
| CDY40934 | Canola | nucleus | 37.28 | 43.65 |
| CDX69571 | Canola | nucleus | 47.73 | 43.53 |
| CDY09872 | Canola | nucleus | 47.34 | 43.17 |
| KRH69576 | Soybean | nucleus | 45.36 | 42.83 |
| KRG93258 | Soybean | nucleus | 48.13 | 42.07 |
| VIT_14s0066g01040.t01 | Wine grape | cytosol | 43.59 | 41.54 |
| Zm00001d027329_P002 | Maize | nucleus | 57.79 | 41.44 |
| KRH56579 | Soybean | nucleus | 47.34 | 40.68 |
| KRG93790 | Soybean | cytosol | 7.69 | 40.62 |
| CDX85590 | Canola | cytosol | 44.58 | 40.5 |
| CDX91035 | Canola | cytosol | 44.18 | 40.36 |
| Bra008749.1-P | Field mustard | nucleus | 47.73 | 40.27 |
| GSMUA_Achr8P33680_001 | Banana | cytosol | 39.84 | 39.69 |
| Solyc02g062740.2.1 | Tomato | nucleus | 47.14 | 39.64 |
| PGSC0003DMT400004867 | Potato | nucleus | 46.55 | 38.88 |
| AT5G14620.1 | Thale cress | nucleus | 47.14 | 38.18 |
| Solyc10g078190.1.1 | Tomato | nucleus | 45.17 | 37.6 |
| PGSC0003DMT400018502 | Potato | nucleus | 44.97 | 37.44 |
| Solyc04g005250.2.1 | Tomato | nucleus | 44.58 | 37.23 |
| GSMUA_Achr11P... | Banana | nucleus | 33.73 | 37.09 |
| AT5G15380.1 | Thale cress | cytoskeleton, cytosol, nucleus | 44.97 | 36.54 |
| CDY40933 | Canola | cytosol | 43.98 | 35.06 |
| GSMUA_Achr3P23940_001 | Banana | nucleus | 40.83 | 34.44 |
| Bra023479.1-P | Field mustard | cytosol | 22.29 | 33.93 |
| Bra004388.1-P | Field mustard | cytosol | 43.59 | 27.15 |
| HORVU7Hr1G000490.1 | Barley | cytosol | 1.58 | 25.0 |
| CDX95928 | Canola | golgi | 44.18 | 23.83 |
| HORVU7Hr1G000410.34 | Barley | mitochondrion | 26.43 | 22.64 |
| HORVU5Hr1G012110.2 | Barley | cytosol | 25.44 | 19.97 |
Protein Annotations
| KEGG:00270+2.1.1.37 | Gene3D:1.10.8.10 | MapMan:12.5.1.11 | Gene3D:3.40.50.150 | UniProt:A0A287MGT7 | InterPro:C5_MeTfrase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 |
| EnsemblPlantsGene:HORVU3Hr1G098970 | EnsemblPlants:HORVU3Hr1G098970.1 | InterPro:IPR001525 | InterPro:IPR015940 | InterPro:IPR030380 | PFAM:PF00145 |
| PFscan:PS50030 | PFscan:PS51680 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM |
| SUPFAM:SSF46934 | SUPFAM:SSF53335 | InterPro:UBA | InterPro:UBA-like_sf | UniParc:UPI000B4762CE | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:-:660454271..660457610
Molecular Weight (calculated)
56887.2 Da
IEP (calculated)
6.302
GRAVY (calculated)
-0.459
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MQALGDEDSL GNNSTSDYAL HSVEDGDGVY FESSDGDDDA GDTEPTFGDY SDEDFLREMS EKDEKINSLV DMGFSEDEAN MAITRCVDGD LSILIDSISA
101: SRVAGTLDLS NHQVTNRFFD CFGGRKKARL LEERKKKRKR YGGTTQGNQP SLDCNHDEHM LIPNPMVGFN LPNYSPPSIR VTRRILEQDI GPPYFYYENV
201: ARALNGVWTT FSRSLYGIQP EFVDSKHLCA AARKRGYIHN LPIDNRAPLL PLPPKTIFEA FPRYKKWWPS WDRRTQFNCL LTSVASATVT ERIQHALEST
301: GNPPPPSVTE RIMAECKRYN LVWVGKNKAA ALEPKEIEYL LGFPKDHTRG VCDTNRYKSL GNTFHVDTVA YHLSVLKGMF PNGVNVLSLF TGIGGGEVAL
401: HRLGINMRTV VSVEIDKASK RIFRDWWDQT QTGTLIEIDD VKSLTNDEVA QFVTRLGGFD LVIGGSPCNN LAGCNRYTRN GLNGEKSVLF YEYVRILNVV
501: KSAMARK
101: SRVAGTLDLS NHQVTNRFFD CFGGRKKARL LEERKKKRKR YGGTTQGNQP SLDCNHDEHM LIPNPMVGFN LPNYSPPSIR VTRRILEQDI GPPYFYYENV
201: ARALNGVWTT FSRSLYGIQP EFVDSKHLCA AARKRGYIHN LPIDNRAPLL PLPPKTIFEA FPRYKKWWPS WDRRTQFNCL LTSVASATVT ERIQHALEST
301: GNPPPPSVTE RIMAECKRYN LVWVGKNKAA ALEPKEIEYL LGFPKDHTRG VCDTNRYKSL GNTFHVDTVA YHLSVLKGMF PNGVNVLSLF TGIGGGEVAL
401: HRLGINMRTV VSVEIDKASK RIFRDWWDQT QTGTLIEIDD VKSLTNDEVA QFVTRLGGFD LVIGGSPCNN LAGCNRYTRN GLNGEKSVLF YEYVRILNVV
501: KSAMARK
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.